RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 GnaqP21279 359 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Caprin2Q05A80 1031 aaKnown RBP10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Tsga10Q6NY15 697 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Enox2Q8R0Z2 598 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Syce1Q9D495 329 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 LrgukQ9D5S7 820 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Dnmt1P13864 1620 aaKnown RBP10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Abcb4P21440 1276 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Cct5P80316 541 aaKnown RBP10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Nlrp1aQ2LKU9 1182 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Dcaf17Q3TUL7 519 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Specc1Q5SXY1 1067 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Arhgef2Q60875 985 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Tbc1d31Q6NXY1 996 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Pdlim2Q8R1G6 349 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Rapgef3Q8VCC8 918 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Hps3Q91VB4 1002 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ccdc89Q9DA73 370 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ctdspl2Q8BG15 465 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Fndc3aQ8BX90 1198 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Dnm3Q8BZ98 863 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Sde2Q8K1J5 448 aaKnown RBP10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Gbp2Q9Z0E6 589 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Tbc1d2B1AVH7 922 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Tex35Q14BK3 207 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Fam228bQ497Q6 232 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Glg1Q61543 1175 aaKnown RBP10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 AdpgkQ8VDL4 496 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Igsf1Q7TQA1 1317 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Dnajc21E9Q8D0 531 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Hmgb1P63158 215 aaKnown RBP10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 B4galnt4Q766D5 1034 aa10.26□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Pdrg1P59048 133 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Cct6aP80317 531 aaKnown RBP10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ccdc7Q9D541 371 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Calml3Q9D6P8 149 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Enc1O35709 589 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Tubb4bP68372 445 aaKnown RBP10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Nom1Q3UFM5 854 aaKnown RBP10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Rapgef1Q3UHC1 1224 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Krt39Q6IFX4 482 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Gpbp1Q6NXH3 473 aaKnown RBP10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Bicd1Q8BR07 835 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Aox2Q5SGK3 1345 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 E9QMW4 1145 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Lipo1J3QME6 396 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Eif6O55135 245 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Rfc1P35601 1131 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Eef2P58252 858 aaKnown RBP10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Dnaaf2Q8BPI1 814 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 FibpQ9JI19 357 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 AatfQ9JKX4 526 aaKnown RBP10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ankrd35E9Q9D8 996 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Svs3aF2Z472 265 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Opa1P58281 960 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 PpanQ91YU8 470 aaKnown RBP10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Rmi1Q9D4G9 616 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Gm20425E9Q035 978 aaKnown RBP10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Cdr1E9Q0B4 517 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 SrprbP47758 269 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Pls1Q3V0K9 630 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Nlrp2Q4PLS0 1046 aaKnown RBP10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Iws1Q8C1D8 766 aa10.25□□□□□ -0.77
Scn8a-213ENSMUST00000201549 VimP20152 466 aaKnown RBP10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Cyp24a1Q64441 514 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Etf1Q8BWY3 437 aaKnown RBP10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Atp7bQ64446 1462 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Rsph10bE9PYQ0 876 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Elf1Q60775 612 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Miga2Q8BK03 593 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Rassf2Q8BMS9 326 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Cyp2ab1S4R196 498 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 MthfslL7N466 203 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Eftud2O08810 971 aaKnown RBP10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Gngt1Q61012 74 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Cep19Q9CQA8 163 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 ChmQ9QXG2 665 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Knl1Q66JQ7 1612 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 InsrrQ9WTL4 1300 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ftl2P49945 183 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Iqsec3Q3TES0 1195 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Esco1Q69Z69 843 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 PicalmQ7M6Y3 660 aaKnown RBP10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Ehd2Q8BH64 543 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Apol10aQ8CCA5 318 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Atad2Q8CDM1 1040 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Slain2Q8CI08 581 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Mettl5Q8K1A0 209 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 SfpqQ8VIJ6 699 aaKnown RBP10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 StrbpQ91WM1 672 aaKnown RBP10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Pcdha7Q91Y13 937 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Clul1Q3ZRW6 464 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Mpp4Q6P7F1 635 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Arhgef6Q8K4I3 771 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Usp33Q8R5K2 909 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 EhhadhQ9DBM2 718 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Tnnc1P19123 161 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 FerP70451 823 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Nudcd3Q8R1N4 363 aa10.24□□□□□ -0.77
Scn8a-213ENSMUST00000201549 Cfap57Q9D180 1249 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms