RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Thrap3Q569Z6 951 aaKnown RBP8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Tom1l2Q5SRX1 507 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Vil1Q62468 827 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ifit1Q64282 463 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Tacc1Q6Y685 774 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Dpp8Q80YA7 892 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Rnaseh2aQ9CWY8 301 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Zbed3Q9D0L1 228 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Lonrf3Q9D4H7 753 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Sall1Q9ER74 1322 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Klhdc9Q3USL1 350 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Usp50Q6P8X6 390 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Tmc4Q7TQ65 694 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ptrh1Q8BW00 204 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Plcd3Q8K2J0 785 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 FktnQ8R507 461 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Glipr1l2Q9CQ35 332 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Pik3ap1Q9EQ32 811 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Atp8b3Q6UQ17 1335 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Mageb2A2AHM0 380 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Pde4aO89084 844 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 1700013D24RikQ0P521 120 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ubash3aQ3V3E1 624 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Rc3h1Q4VGL6 1130 aaKnown RBP8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Scnn1aQ61180 699 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ubac1Q8VDI7 409 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Akap8Q9DBR0 687 aaKnown RBP8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Igbp1bQ9QZ29 343 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Krt85Q9Z2T6 507 aa8.69□□□□□ -1.02
Usp40-204ENSMUST00000187758 Zmym2Q9CU65 1376 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Gadd45bP22339 160 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 CnpP16330 420 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 D1Pas1P16381 660 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Dnm1P39053 867 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ranbp6Q8BIV3 1105 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ccer1Q9CQL2 403 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Dnai2A2AC93 623 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 GabreA2AMW3 916 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Flvcr1B2RXV4 560 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Cyp2c68K7N6C2 491 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 GnaqP21279 359 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Vcam1P29533 739 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Llgl2Q3TJ91 1027 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Esyt1Q3U7R1 1092 aaKnown RBP8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Acnat2Q8BGG9 420 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 DpydQ8CHR6 1025 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Tmem47Q9JJG6 181 aa8.68□□□□□ -1.02
Usp40-204ENSMUST00000187758 Psme4Q5SSW2 1843 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 ImpactO55091 318 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Mybl2P48972 704 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Mcm4P49717 862 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Zfp317Q8C0Q5 607 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ccdc178Q8CDV0 866 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Gtf3c5Q8R2T8 520 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Rbm19Q8R3C6 952 aaKnown RBP8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Atxn7Q8R4I1 867 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Trmt112Q9DCG9 125 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Lamb1P02469 1786 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Prss51A0A286YDY8 319 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Alppl2P24823 529 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ptpn12P35831 775 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 LdhdQ7TNG8 484 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Plcd1Q8R3B1 756 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Stk39Q9Z1W9 556 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ecm29Q6PDI5 1840 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Col1a1P11087 1453 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 NyxP83503 476 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Fam196bQ6GQV1 535 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Pip5kl1Q6U7H8 395 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Kbtbd13Q8C828 458 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Mad2l2Q9D752 211 aa8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 Znf638Q61464 1960 aaKnown RBP8.67□□□□□ -1.02
Usp40-204ENSMUST00000187758 A0A1Y7VML8 143 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Gjd4Q8BSD4 364 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Nup88Q8CEC0 753 aaKnown RBP8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Borcs6Q9D6W8 360 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Tsc2Q61037 1814 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Cap1P40124 474 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Rps12P63323 132 aaKnown RBP8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 MycbpapQ5SUV2 932 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Glra4Q61603 456 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Mtmr3Q8K296 1196 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Styxl1Q9DAR2 321 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 LdhaP06151 332 aaKnown RBP8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Tnnt2P50752 301 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ube2hP62257 183 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Gxylt1Q3UHH8 404 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Tbc1d9bQ5SVR0 1263 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Slitrk3Q810B9 980 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 CerkQ8K4Q7 531 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Mei1Q9D4I2 1268 aa8.66□□□□□ -1.02
Usp40-204ENSMUST00000187758 Nap1l2P51860 460 aa8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 GmpsQ3THK7 693 aa8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Exoc8Q6PGF7 716 aa8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Casc1Q6TDU8 730 aa8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Kcnj14Q8JZN3 434 aa8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Mtmr4Q91XS1 1190 aa8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Prpf3Q922U1 683 aaKnown RBP8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Eif4enif1Q9EST3 983 aaKnown RBP8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Gpaa1Q9WTK3 621 aa8.65□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 109.2 ms