RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Trim80Q3V061 624 aa13.81□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Tbc1d7Q9D0K0 293 aa13.81□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 4930407I10RikD3Z5T8 1512 aa13.81□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Exoc4O35382 975 aa13.81□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Pde6bP23440 856 aa13.81□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Cyp4f39Q8BGU0 532 aa13.81□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Lrrc42Q8R2U7 421 aa13.81□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Pola2P33611 600 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Gfpt1P47856 697 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Kcnb1Q03717 857 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Naa35Q6PHQ8 725 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 HdlbpQ8VDJ3 1268 aaKnown RBP13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Stard3nlQ9DCI3 235 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Gm5580A0A0N4SVP8 411 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Gm21969J3QJZ1 289 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Ctnnd1P30999 938 aaKnown RBP13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Hps6Q8BLY7 805 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Tcp11l1Q8BTG3 509 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Tldc1Q8K0P3 455 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Dhx58Q99J87 678 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Speer4aF8VPX6 267 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Atf5O70191 283 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Grm8P47743 908 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Ezh2Q61188 746 aaKnown RBP13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Apol10aQ8CCA5 318 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Usp33Q8R5K2 909 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Eif3hQ91WK2 352 aaKnown RBP13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Dbndd2Q9CRD4 158 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Fam133bQ9CVI2 245 aaKnown RBP13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Lrriq1Q0P5X1 1673 aa13.8□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Ube3aO08759 870 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Lrrc4bP0C192 709 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Irf6P97431 467 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Soga3Q6NZL0 945 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Haus7Q8BKT8 364 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Alg3Q8K2A8 438 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Ascc1Q9D8Z1 356 aaKnown RBP13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Uts2Q9QZQ3 123 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 NpeppsQ11011 920 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Tacc1Q6Y685 774 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 F13a1Q8BH61 732 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Rbbp5Q8BX09 538 aaKnown RBP13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Znf428Q8C1M2 176 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Metap2O08663 478 aaKnown RBP13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Opa1P58281 960 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Psmd1Q3TXS7 953 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Rnpc3Q3UZ01 514 aaKnown RBP13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 CoilQ5SU73 570 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Serpinb1cQ5SV42 375 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 RragbQ6NTA4 374 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Ptcd1Q8C2E4 695 aaKnown RBP13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Eif2b5Q8CHW4 717 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Rabgef1Q9JM13 491 aa13.79□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 SsbP32067 415 aaKnown RBP13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Myo6Q64331 1265 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Fam170aQ66LM6 333 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Usp44Q8C2S0 711 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Sash3Q8K352 380 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Peg12Q9WVA7 283 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Carmil3Q3UFQ8 1375 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Abcc12Q80WJ6 1366 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Zcchc11B2RX14 1644 aaKnown RBP13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Vmn2r23E9PXI5 849 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Dctn1O08788 1281 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 RpsaP14206 295 aaKnown RBP13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 DbnlQ62418 436 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Gigyf2Q6Y7W8 1291 aaKnown RBP13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Ncaph2Q8BSP2 607 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Skor1Q8BX46 964 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 ClasrpQ8CFC7 668 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Pde5aQ8CG03 865 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Lrrc45Q8CIM1 670 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 E2f4Q8R0K9 410 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Slf1Q8R3P9 1054 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 ShprhQ7TPQ3 1674 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Gm6588E9Q3K0 461 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Samd15F6XZJ7 620 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Ddr1Q03146 911 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Yipf3Q3UDR8 347 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Tmed8Q3UHI4 326 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Prdm1Q60636 856 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Gja3Q64448 417 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Ehbp1Q69ZW3 1231 aa13.78□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Yeats2Q3TUF7 1407 aa13.77□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 IkbkbO88351 757 aa13.77□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Mex3cQ05A36 652 aaKnown RBP13.77□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Tex35Q14BK3 207 aa13.77□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Fkbp5Q64378 456 aa13.77□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Fnbp4Q6ZQ03 1031 aa13.77□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Sox30Q8CGW4 782 aa13.77□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 ParnQ8VDG3 624 aa13.77□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 PzpQ61838 1495 aa13.77□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 AglF8VPN4 1532 aa13.77□□□□□ -0.2
Pcdh1-202ENSMUST00000159405 Cpsf2O35218 782 aaKnown RBP13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Casp8O89110 480 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Tspyl3Q3UYP3 334 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ncapg2Q6DFV1 1138 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Fnbp1Q80TY0 616 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Cep104Q80V31 926 aa13.77□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Tpcn2Q8BWC0 731 aa13.77□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms