RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 MmeQ61391 750 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 HrQ61645 1182 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Cdc23Q8BGZ4 597 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Srgap2Q91Z67 1071 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Speer4bQ9D9F7 267 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Slc5a4aQ9ET37 656 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Naaladl2A0A0N4SUJ3 795 aa12.96□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Gucy2cQ3UWA6 1072 aa12.96□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Sun3Q5SS91 320 aa12.96□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Cyp7b1Q60991 507 aa12.96□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 IqcgQ80W32 419 aa12.96□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Q8C1R3 189 aa12.96□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ccdc73Q8CDM4 1066 aa12.96□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Trim11Q99PQ2 467 aa12.96□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 GdaQ9R111 454 aa12.96□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Pcdhb9E9Q5G2 828 aa12.96□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Enc1O35709 589 aa12.96□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 TsksO54887 585 aa12.96□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Cplx2P84086 134 aa12.96□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Skap2Q3UND0 358 aa12.96□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ccdc93Q7TQK5 629 aa12.96□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Dnph1Q80VJ3 173 aa12.96□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Hgh1Q8C3I8 393 aa12.96□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Efcc1Q9JJF6 558 aa12.96□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Tulp1Q9Z273 543 aa12.96□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Prl3d2F6R3P9 224 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Myo1aO88329 1043 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 LarsQ8BMJ2 1178 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ces1dQ8VCT4 565 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Pcdha7Q91Y13 937 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Riok3Q9DBU3 519 aaKnown RBP12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Wnt7aP24383 349 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Slc7a1Q09143 622 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Washc4Q3UMB9 1173 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Pla2g4fQ50L41 855 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ift88Q61371 824 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Rrp1bQ91YK2 724 aaKnown RBP12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 4930550L24RikQ99PA7 320 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ccdc39Q9D5Y1 937 aa12.95□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Carmil3Q3UFQ8 1375 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Dhx8A2A4P0 1244 aaKnown RBP12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Cyp3a59D3Z2W7 503 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Gpr182P43142 395 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Sh3gl3Q62421 347 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Dusp9Q7TNL7 452 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Clec16aQ80U30 1036 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Enox1Q8BHR2 643 aaKnown RBP12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Smc4Q8CG47 1286 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Nwd2Q6P5U7 1742 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Kifc2O08672 792 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Nkx2-5P42582 318 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Chp1P61022 195 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Secisbp2lQ6A098 1086 aaKnown RBP12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Naif1Q6PFD7 327 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Slc5a1Q8C3K6 665 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Lztfl1Q9JHQ5 299 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Myh7bA2AQP0 1941 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Zfand4D3Z3C6 739 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Phldb3E9QAF4 648 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Pola2P33611 600 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ftl2P49945 183 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Eif3j1Q3UGC7 261 aaKnown RBP12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Vil1Q62468 827 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Eif3j2Q66JS6 263 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Flad1Q8R123 492 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Txndc5Q91W90 417 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Syf2Q9D198 242 aaKnown RBP12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 IcoslgQ9JHJ8 322 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Kank3Q9Z1P7 791 aa12.94□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Gcom1E9PZ54 550 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 AK157302I3ITR1 129 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Smarcc1P97496 1104 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 MyzapQ3UIJ9 466 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Tmem232Q5K6N0 675 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Bsdc1Q80Y55 427 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Sirt2Q8VDQ8 389 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Pold4Q9CWP8 107 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Isca1Q9D924 129 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Ccdc97Q9DBT3 340 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Trim30cD3YVI9 513 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Tnni2P13412 182 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 SsbP32067 415 aaKnown RBP12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Cct5P80316 541 aaKnown RBP12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Cdkl5Q3UTQ8 938 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Agtpbp1Q641K1 1218 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Slitrk3Q810B9 980 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Caps2Q8BUG5 550 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Kif2bQ8C0N1 668 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Pde5aQ8CG03 865 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Sash3Q8K352 380 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Tut1Q8R3F9 869 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Pcdhb22Q91XZ8 794 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Fam213aQ9CYH2 218 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Coro7Q9D2V7 922 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Wdr19Q3UGF1 1341 aa12.93□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 TnrQ8BYI9 1358 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Nrxn3Q6P9K9 1571 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Abl1P00520 1123 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Foxd1Q61345 456 aa12.92□□□□□ -0.34
Prpf40b-208ENSMUST00000136980 Tpm3-rs7D3Z2H9 248 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms