RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Pms1Q8K119 917 aa11.45□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Tmed5Q9CXE7 229 aa11.45□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Arhgef28P97433 1693 aa11.45□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Irak1Q62406 710 aa11.45□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Myo6Q64331 1265 aa11.45□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Spag7Q7TNE3 227 aaKnown RBP11.45□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Rufy1Q8BIJ7 712 aa11.45□□□□□ -0.58
Ctc1-202ENSMUST00000116359 SncbQ91ZZ3 133 aa11.45□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Sycp2lA0A0M3U1B0 842 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Vps54Q5SPW0 977 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Krt42Q6IFX2 452 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Fnbp1Q80TY0 616 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Exd1Q8CDF7 570 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Ssh3Q8K330 649 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Slc26a8Q8R0C3 999 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Eps8l2Q99K30 729 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Scrn1Q9CZC8 414 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Spata1Q9D5R4 444 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Tube1Q9D6T1 475 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 FancaQ9JL70 1439 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Znf335A2A5K6 1337 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Wdr17E9Q271 1322 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Lrrfip2Q91WK0 415 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Zbtb3Q91X45 518 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Dhx58Q99J87 678 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Trim42Q9D2H5 723 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Mfap3lQ9D3X9 409 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Zc3h13E9Q784 1729 aaKnown RBP11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Cntnap1O54991 1385 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Tpm3-rs7D3Z2H9 248 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Pdrg1P59048 133 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Spout1Q3UHX9 385 aaKnown RBP11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Trim80Q3V061 624 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Ezh2Q61188 746 aaKnown RBP11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 U2af1l4Q8BGJ9 220 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Matr3Q8K310 846 aaKnown RBP11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Txnrd1Q9JMH6 613 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Cep170bQ80U49 1574 aa11.44□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Prl7a2O54831 253 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Rps6ka3P18654 740 aaKnown RBP11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Ets1P27577 440 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Sox5P35710 763 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Ankib1Q6ZPS6 1085 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Cypt1Q8CH20 168 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Dnm1lQ8K1M6 742 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Arhgef6Q8K4I3 771 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Orc1Q9Z1N2 840 aaKnown RBP11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Gm21698A0A087WQP8 267 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Pdzrn4E9PUZ9 1014 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Casp8O89110 480 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Lrrc4bP0C192 709 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Nek1P51954 1203 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Pls1Q3V0K9 630 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Pcdhb14Q6PB90 796 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Sar1bQ9CQC9 198 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Baiap2l1Q9DBJ3 514 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Rabgef1Q9JM13 491 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Bub1bQ9Z1S0 1052 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Map3k19E9Q3S4 1311 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Myo5bP21271 1818 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Myo1eE9Q634 1107 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 InhbeO08717 350 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Psmd1Q3TXS7 953 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Gm28047Q3US59 414 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Luc7l2Q7TNC4 392 aaKnown RBP11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Stkld1Q80YS9 662 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 OplahQ8K010 1288 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Sgsm3Q8VCZ6 750 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 4930449I24RikQ9D5E3 319 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Fam217aQ9D9W6 419 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Abcc4E9Q236 1325 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Atp8b5A3FIN4 1183 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Stim2P83093 746 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Alg3Q8K2A8 438 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 BrapQ99MP8 591 aa11.43□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Gm21190A0A0G2JGJ6 266 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Dapk3O54784 448 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Specc1Q5SXY1 1067 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Dhx38Q80X98 1228 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Acad11Q80XL6 779 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 4930504O13RikQ8C5Z9 145 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Lrrc59Q922Q8 307 aaKnown RBP11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Aipl1Q924K1 328 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Tbc1d7Q9D0K0 293 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 GgcxQ9QYC7 757 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Tet3Q8BG87 1668 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Gm5814J3QP80 125 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Adssl1P28650 457 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Mrfap1Q9CQL7 125 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Nfs1Q9Z1J3 459 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Npc1l1Q6T3U4 1333 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Tecpr2Q3UH45 1423 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Odf2A3KGV1 830 aaKnown RBP11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Taf4bG5E8Z2 855 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Lrrn4P59383 733 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Capza3P70190 299 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Gm21985Q6P6P5 1106 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 D130040H23RikQ8BII3 405 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Trpa1Q8BLA8 1125 aa11.42□□□□□ -0.58
Ctc1-202ENSMUST00000116359 Usp42B2RQC2 1324 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms