RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 Tmem47Q9JJG6 181 aa17.78■□□□□ 0.44
Trim3-201ENSMUST00000057525 Tigd5Q499M4 642 aa17.77■□□□□ 0.44
Trim3-201ENSMUST00000057525 Lrrc15Q80X72 579 aa17.77■□□□□ 0.44
Trim3-201ENSMUST00000057525 Trim59Q922Y2 403 aa17.77■□□□□ 0.44
Trim3-201ENSMUST00000057525 Mad2l2Q9D752 211 aa17.77■□□□□ 0.44
Trim3-201ENSMUST00000057525 Ncf1Q09014 390 aa17.77■□□□□ 0.44
Trim3-201ENSMUST00000057525 Triml1Q8BVP1 470 aa17.77■□□□□ 0.44
Trim3-201ENSMUST00000057525 Akap8Q9DBR0 687 aaKnown RBP17.77■□□□□ 0.44
Trim3-201ENSMUST00000057525 Zbtb22Q9Z0G7 638 aa17.77■□□□□ 0.44
Trim3-201ENSMUST00000057525 Gimap7Q8R379 293 aa17.77■□□□□ 0.43
Trim3-201ENSMUST00000057525 Cep89Q9CZX2 791 aa17.77■□□□□ 0.43
Trim3-201ENSMUST00000057525 Trmt112Q9DCG9 125 aa17.77■□□□□ 0.43
Trim3-201ENSMUST00000057525 Usp34Q6ZQ93 3582 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Dcdc2bF7BCK0 340 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Copb2O55029 905 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Cplx2P84086 134 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Cnnm3Q32NY4 713 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Tex2Q6ZPJ0 1128 aaKnown RBP17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Kcnj14Q8JZN3 434 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Glrx3Q9CQM9 337 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Tjap1Q9DCD5 539 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Dock5B2RY04 1868 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Dnm1P39053 867 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Gxylt1Q3UHH8 404 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Glra4Q61603 456 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Ube2oQ6ZPJ3 1288 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Calhm4Q8CE93 315 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Txnrd2Q9JLT4 524 aa17.76■□□□□ 0.43
Trim3-201ENSMUST00000057525 Prss51A0A286YDY8 319 aa17.75■□□□□ 0.43
Trim3-201ENSMUST00000057525 PaoxQ8C0L6 504 aa17.75■□□□□ 0.43
Trim3-201ENSMUST00000057525 Zfp317Q8C0Q5 607 aa17.75■□□□□ 0.43
Trim3-201ENSMUST00000057525 Zscan18E9PUD6 809 aa17.75■□□□□ 0.43
Trim3-201ENSMUST00000057525 Map3k9Q3U1V8 1077 aa17.75■□□□□ 0.43
Trim3-201ENSMUST00000057525 Psen2Q61144 448 aa17.75■□□□□ 0.43
Trim3-201ENSMUST00000057525 Slc27a3O88561 667 aa17.74■□□□□ 0.43
Trim3-201ENSMUST00000057525 MycbpapQ5SUV2 932 aa17.74■□□□□ 0.43
Trim3-201ENSMUST00000057525 Mei1Q9D4I2 1268 aa17.74■□□□□ 0.43
Trim3-201ENSMUST00000057525 Ccdc88aQ5SNZ0 1873 aa17.74■□□□□ 0.43
Trim3-201ENSMUST00000057525 LyarQ08288 388 aaKnown RBP17.74■□□□□ 0.43
Trim3-201ENSMUST00000057525 Plxnb2B2RXS4 1842 aa17.74■□□□□ 0.43
Trim3-201ENSMUST00000057525 UncxO08934 530 aa17.74■□□□□ 0.43
Trim3-201ENSMUST00000057525 Traf3ip1Q149C2 625 aa17.74■□□□□ 0.43
Trim3-201ENSMUST00000057525 Qrich1Q3UA37 777 aa17.74■□□□□ 0.43
Trim3-201ENSMUST00000057525 Ckap2Q3V1H1 664 aa17.74■□□□□ 0.43
Trim3-201ENSMUST00000057525 LdhdQ7TNG8 484 aa17.74■□□□□ 0.43
Trim3-201ENSMUST00000057525 Gm30191A0A0U1RNT7 187 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Nfil3O08750 462 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Ppef2O35385 757 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Lnx1O70263 728 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Sema3fO88632 785 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Myo1bP46735 1107 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Foxp1P58462 705 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 MyrflQ3UN70 904 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 LrmpQ60664 539 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Etnk1Q9D4V0 363 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Tfcp2Q9ERA0 502 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Stk39Q9Z1W9 556 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Sall1Q9ER74 1322 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Sept2P42208 361 aaKnown RBP17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Tbc1d5Q80XQ2 815 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Ift74Q8BKE9 600 aa17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 PtmsQ9D0J8 101 aaKnown RBP17.73■□□□□ 0.43
Trim3-201ENSMUST00000057525 Scg2Q03517 617 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Gpr162Q3UN16 588 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Cdkl5Q3UTQ8 938 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Oog3Q3UWY1 500 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Slitrk3Q810B9 980 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Larp6Q8BN59 492 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Kbtbd13Q8C828 458 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Ccar2Q8VDP4 922 aaKnown RBP17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Mtmr4Q91XS1 1190 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Ndfip2Q91ZP6 311 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Lgr6Q3UVD5 967 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Znf697Q569E7 569 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 VmacQ8BP01 174 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Sec62Q8BU14 398 aaKnown RBP17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Ppil2Q9D787 521 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 SrcapA0A087WQ44 3271 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 A0A1W2P6Q8 802 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Gm9048A0A1W2P7H4 802 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 A0A1W2P7Z8 802 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Gm9046A0A1W2P855 802 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Cd22P35329 862 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Q3UJP5 209 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Lman1lQ8VCD3 505 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Homer1Q9Z2Y3 366 aa17.72■□□□□ 0.43
Trim3-201ENSMUST00000057525 Lamb1P02469 1786 aa17.71■□□□□ 0.43
Trim3-201ENSMUST00000057525 Sap30bpQ02614 308 aa17.71■□□□□ 0.43
Trim3-201ENSMUST00000057525 Prr7Q3V0I2 269 aa17.71■□□□□ 0.43
Trim3-201ENSMUST00000057525 Ascc2Q91WR3 749 aa17.71■□□□□ 0.43
Trim3-201ENSMUST00000057525 Cfap99A0A140LIX9 648 aa17.71■□□□□ 0.43
Trim3-201ENSMUST00000057525 Brip1Q5SXJ3 1174 aa17.71■□□□□ 0.43
Trim3-201ENSMUST00000057525 Cnot7Q60809 285 aa17.71■□□□□ 0.43
Trim3-201ENSMUST00000057525 Inpp5bQ8K337 993 aa17.71■□□□□ 0.43
Trim3-201ENSMUST00000057525 TicrrQ8BQ33 1889 aa17.7■□□□□ 0.42
Trim3-201ENSMUST00000057525 Zscan20B2KFW1 1030 aa17.7■□□□□ 0.42
Trim3-201ENSMUST00000057525 Fdx1P46656 188 aa17.7■□□□□ 0.42
Trim3-201ENSMUST00000057525 Scnn1aQ61180 699 aa17.7■□□□□ 0.42
Trim3-201ENSMUST00000057525 Gpaa1Q9WTK3 621 aa17.7■□□□□ 0.42
Trim3-201ENSMUST00000057525 Col1a1P11087 1453 aa17.7■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 57.7 ms