RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Rasa3Q60790 834 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Tmc4Q7TQ65 694 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 BC048507Q80ZS7 89 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Larp6Q8BN59 492 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Cog5Q8C0L8 829 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Elp3Q9CZX0 547 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Trmt112Q9DCG9 125 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 PappaQ8R4K8 1624 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Bace1P56818 501 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Stim2P83093 746 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 1700013D24RikQ0P521 120 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Rsph3aQ3UFY4 516 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Rnf214Q8BFU3 668 aaKnown RBP8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Lrrc24Q8BHA1 521 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 CenppQ9CZ92 286 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 A430078G23RikE9Q7Y4 484 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Lipo1J3QME6 396 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Igf2bp2Q5SF07 592 aaKnown RBP8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ccdc85aQ5SP85 500 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Tdrd3Q91W18 743 aaKnown RBP8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Upf1Q9EPU0 1124 aaKnown RBP8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Mkrn1Q9QXP6 481 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Phlpp2Q8BXA7 1320 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Gm29094F6Q785 221 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Rfpl4bJ3QPR6 266 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Filip1lQ6P6L0 1131 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 DaglaQ6WQJ1 1044 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Trpv1Q704Y3 839 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Atf7Q8R0S1 413 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Apbb1ipQ8R5A3 670 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ivns1abpQ920Q8 642 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ppp6r3Q922D4 844 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 PtmsQ9D0J8 101 aaKnown RBP7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Nova2D3YVV7 556 aaKnown RBP7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Bnip3O55003 187 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Magea8O89012 320 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Zfp953Q3UPV7 304 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ndfip2Q91ZP6 311 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Slx4ipQ9D7Y9 413 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Mx1P09922 631 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Alppl2P24823 529 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Zhx1P70121 873 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Secisbp2lQ6A098 1086 aaKnown RBP7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 PicalmQ7M6Y3 660 aaKnown RBP7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Rasgrp4Q8BTM9 673 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ppp1r11Q8K1L5 131 aa7.99□□□□□ -1.13
Bdnf-201ENSMUST00000053317 CbarpQ66L44 698 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Lrrc2Q8VDB8 371 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 StrbpQ91WM1 672 aaKnown RBP7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Cdca7lQ922M5 438 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Mrc1Q61830 1456 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Adgra3Q7TT36 1310 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ep400Q8CHI8 3072 aaKnown RBP7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Mmp10O55123 476 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Npr3P70180 536 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 BaatQ91X34 420 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 4921524L21RikQ9D5T2 438 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Zscan18E9PUD6 809 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Cyp2b10P12791 500 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 MycbpapQ5SUV2 932 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ddx60E9PZQ1 1711 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Tpd52l1O54818 204 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 NefhP19246 1090 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Trap1aP19473 224 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Cbx1P83917 185 aaKnown RBP7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Cnnm2Q3TWN3 875 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 D630036H23RikQ3UQD6 204 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Klhdc9Q3USL1 350 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Mansc4Q3UU94 337 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Sfi1Q3UZY0 1216 aaKnown RBP7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Tm4sf1Q64302 202 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Gm21985Q6P6P5 1106 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ppil4Q9CXG3 492 aaKnown RBP7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Suclg2Q9Z2I8 433 aa7.98□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Gm36210A0A1B0GS00 229 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Cplx1P63040 134 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Nbr1P97432 988 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Gtf2f1Q3THK3 508 aaKnown RBP7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Fbxo28Q8BIG4 368 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 AW822073A0A0N4SUK1 652 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Oog1E9Q5G7 496 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ankrd35E9Q9D8 996 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 EvcP57680 1005 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Jakmip3Q5DTN8 844 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Sv2cQ69ZS6 727 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 HlcsQ920N2 722 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Fzd9Q9R216 592 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Lama2Q60675 3118 aaKnown RBP7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Zscan20B2KFW1 1030 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Serpinb2P12388 415 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ccnd3P30282 292 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Slc9c1Q6UJY2 1175 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 QarsQ8BML9 775 aa7.97□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Abca3Q8R420 1704 aa7.96□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Tbc1d4Q8BYJ6 1307 aa7.96□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Gm44503E9PYU5 387 aa7.96□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Metap2O08663 478 aaKnown RBP7.96□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Adam7O35227 789 aa7.96□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ccdc174Q3U155 467 aa7.96□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Foxn1Q61575 648 aa7.96□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 229.9 ms