RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Otud7bB2RUR8 840 aa20.5■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Il4rP16382 810 aa20.5■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Lbhd1A0A087WPA0 259 aa20.5■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Gja10Q9WUS4 505 aa20.5■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Tnip1Q9WUU8 647 aa20.5■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Il7P10168 154 aa20.5■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Arglu1Q3UL36 271 aaKnown RBP20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 QarsQ8BML9 775 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Trpc3Q9QZC1 836 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Tspyl1O88852 379 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Cd2bp2Q9CWK3 342 aaKnown RBP20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Med23Q80YQ2 1367 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 DohhA0A1Y7VJ29 135 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Ccdc129Q14B48 1034 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 CnstQ8CBC4 711 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Xpo5Q924C1 1204 aaKnown RBP20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Cst12Q9DAN8 128 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Kiaa0319Q5SZV5 1081 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Ccdc148Q6P5U8 527 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Slc7a6osQ7TPE5 306 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Dmrtc1Q9D9R7 182 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 LdhbP16125 334 aaKnown RBP20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Taf12Q8VE65 161 aa20.49■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Elf1Q60775 612 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Gas7Q60780 421 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Krt7Q9DCV7 457 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Nlrp5Q9R1M5 1163 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Atad2Q8CDM1 1040 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Fndc1E9Q043 1732 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Fam204aQ8C6C7 236 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Kifap3P70188 793 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 GabpaQ00422 454 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Asic2Q925H0 512 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Stx17Q9D0I4 301 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Zfyve16Q80U44 1528 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Pfkfb1P70266 471 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Crybg3Q80W49 1005 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Bola3Q8CEI1 110 aa20.48■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Fez2Q6TYB5 348 aa20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 MypnQ5DTJ9 1315 aa20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Pcdhb9E9Q5G2 828 aa20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Serpinb6bO08804 377 aa20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 DnttP09838 530 aa20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Frat1P70339 274 aa20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 MarsQ68FL6 902 aaKnown RBP20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Vps37cQ8R105 352 aa20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Ap1b1O35643 943 aaKnown RBP20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Caprin2Q05A80 1031 aaKnown RBP20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Galnt17Q7TT15 598 aa20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Susd4Q8BH32 490 aa20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 PcQ05920 1178 aa20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Gramd4Q8CB44 633 aa20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Dnmt1P13864 1620 aaKnown RBP20.47■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Amhr2Q8K592 568 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Mylk2Q8VCR8 613 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Diaph1O08808 1255 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Mcm5P49718 733 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Tmem2Q5FWI3 1383 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Gm11549A0A286YD83 63 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Znf568E9PYI1 671 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Cep63Q3UPP8 700 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Ctnna3Q65CL1 895 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Klhl20Q8VCK5 604 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Gm5935Q497S0 212 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Usp11Q99K46 921 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Mroh6V9GX81 722 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Stac3Q8BZ71 360 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Osbpl5Q9ER64 874 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Efcc1Q9JJF6 558 aa20.46■□□□□ 0.87
Scaf11-201ENSMUST00000047835 Rims1Q99NE5 1463 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 A0A1Y7VML8 143 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Ccdc78D3Z5T1 437 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Gm2030D3Z7C4 212 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Cyp2c67Q569X9 491 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Nxf7Q80SZ6 620 aaKnown RBP20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Gm20425E9Q035 978 aaKnown RBP20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 SrprbP47758 269 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Tnni3P48787 211 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Pcif1P59114 706 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Mier3Q3UHF3 551 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Dclk3Q8BWQ5 790 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Ddx39aQ8VDW0 427 aaKnown RBP20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Bbs5Q9CZQ9 341 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Tfap4Q9JIZ5 338 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Tnnc1P19123 161 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Dnajb6O54946 365 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Foxp1P58462 705 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 SpopQ6ZWS8 374 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Col15a1O35206 1367 aa20.45■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Mxra7Q9CZH7 178 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Zfpm1O35615 995 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Nyap1Q6PFX7 833 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Fbxo11Q7TPD1 930 aaKnown RBP20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Ripor2Q80U16 1078 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Rnf17Q99MV7 1640 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Flot1O08917 428 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Rnaseh1O70338 285 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Cct6aP80317 531 aaKnown RBP20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Brinp3Q499E0 766 aa20.44■□□□□ 0.86
Scaf11-201ENSMUST00000047835 Tubgcp2Q921G8 905 aa20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms