RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Thap2Q9D305 217 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Mfap3lQ9D3X9 409 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Kndc1Q0KK55 1742 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Wnt7aP24383 349 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Gnat2P50149 354 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Sec23aQ01405 765 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Gtf2f1Q3THK3 508 aaKnown RBP17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 C87499Q3UX49 493 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Ctnna3Q65CL1 895 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Cep85Q8BMK0 761 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Zbtb1Q91VL9 713 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Pik3ap1Q9EQ32 811 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Cdhr2E9Q7P9 1308 aa17.04■□□□□ 0.32
Nup54-201ENSMUST00000038514 Cyp3a25O09158 503 aa17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 HdgfP51859 237 aaKnown RBP17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 Drc7Q6V3W6 876 aa17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 Ufl1Q8CCJ3 793 aaKnown RBP17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 ZgpatQ8VDM1 511 aa17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 Pcdha7Q91Y13 937 aa17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 PdclQ9DBX2 301 aa17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 Efcc1Q9JJF6 558 aa17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 Zscan20B2KFW1 1030 aa17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 Zbtb7aO88939 569 aaKnown RBP17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 Mfap3Q922T2 349 aa17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 SelenooQ9DBC0 667 aa17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 Hdac6Q9Z2V5 1149 aa17.03■□□□□ 0.32
Nup54-201ENSMUST00000038514 Gm3409A0A0G2JE67 319 aa17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Trap1aP19473 224 aa17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Ccdc34Q3UI66 367 aa17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Plekha7Q3UIL6 1118 aaKnown RBP17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Mrps31Q61733 384 aaKnown RBP17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Dcaf5Q80T85 946 aa17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Cdc23Q8BGZ4 597 aa17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Rasal3Q8C2K5 1041 aa17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Bap1Q99PU7 728 aa17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Tube1Q9D6T1 475 aa17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Igsf9bE9PZ19 1328 aa17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Znfx1Q8R151 1909 aaKnown RBP17.02■□□□□ 0.32
Nup54-201ENSMUST00000038514 Gm43738A0A0G2JEA5 862 aa17.02■□□□□ 0.31
Nup54-201ENSMUST00000038514 4932429P05RikA2ADI4 785 aa17.02■□□□□ 0.31
Nup54-201ENSMUST00000038514 Dennd3A2RT67 1274 aa17.02■□□□□ 0.31
Nup54-201ENSMUST00000038514 Vgll3P85442 326 aa17.02■□□□□ 0.31
Nup54-201ENSMUST00000038514 Gucy2cQ3UWA6 1072 aa17.02■□□□□ 0.31
Nup54-201ENSMUST00000038514 Rbm12b2Q66JV4 834 aaKnown RBP17.02■□□□□ 0.31
Nup54-201ENSMUST00000038514 Rnf41Q8BH75 317 aa17.02■□□□□ 0.31
Nup54-201ENSMUST00000038514 Olfm5Q8BU90 496 aa17.02■□□□□ 0.31
Nup54-201ENSMUST00000038514 Tob2Q9JM55 345 aa17.02■□□□□ 0.31
Nup54-201ENSMUST00000038514 Col20a1Q923P0 1320 aa17.02■□□□□ 0.31
Nup54-201ENSMUST00000038514 Snrpa1P57784 255 aaKnown RBP17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 Tas2r124Q7M718 309 aa17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 Caps2Q8BUG5 550 aa17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 Ttc12Q8BW49 704 aa17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 Hgh1Q8C3I8 393 aa17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 Rrp1bQ91YK2 724 aaKnown RBP17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 Tnni2P13412 182 aa17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 FntaQ61239 377 aa17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 Hexim1Q8R409 356 aaKnown RBP17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 Uap1Q91YN5 522 aa17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 Cfap45Q9D9U9 551 aa17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 Lmbr1Q9JIT0 490 aa17.01■□□□□ 0.31
Nup54-201ENSMUST00000038514 Cyp2j7A0A140T8U1 504 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Psmb7P70195 277 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Znhit6Q3UFB2 460 aaKnown RBP17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Olfr121Q5CZY0 321 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Sun3Q5SS91 320 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 CtcfQ61164 736 aaKnown RBP17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Otop3Q80UF9 577 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Gga3Q8BMI3 718 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Tcp11l2Q8K1H7 517 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Rapgef3Q8VCC8 918 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Tmem132aQ922P8 1018 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Prc1Q99K43 603 aaKnown RBP17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Scgb2b18A0A087WPA9 112 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Prdm4Q80V63 803 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Mical1Q8VDP3 1048 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Brms1Q99N20 246 aa17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Eif4enif1Q9EST3 983 aaKnown RBP17■□□□□ 0.31
Nup54-201ENSMUST00000038514 Usp5P56399 858 aaKnown RBP16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Adam6bQ6IMH7 756 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Atp1a2Q6PIE5 1020 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Phldb2Q8K1N2 1249 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Ubac1Q8VDI7 409 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Prpf3Q922U1 683 aaKnown RBP16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Golga5Q9QYE6 729 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Ulk4Q3V129 1303 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Znf638Q61464 1960 aaKnown RBP16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 A0A1W2P6Q8 802 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Gm9048A0A1W2P7H4 802 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 A0A1W2P7S8 802 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 A0A1W2P7Z8 802 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Gm9046A0A1W2P855 802 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Zfand4D3Z3C6 739 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Siah1aP61092 282 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Ttll12Q3UDE2 639 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Cdc5lQ6A068 802 aaKnown RBP16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 MlecQ6ZQI3 291 aaKnown RBP16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Snd1Q78PY7 910 aaKnown RBP16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Apol10aQ8CCA5 318 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Txndc5Q91W90 417 aa16.99■□□□□ 0.31
Nup54-201ENSMUST00000038514 Rai14Q9EP71 979 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms