RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Golph3lQ8R088 285 aaKnown RBP12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Bbox1Q924Y0 387 aa12.91□□□□□ -0.34
Trim55-201ENSMUST00000029139 Lmnb1P14733 588 aaKnown RBP12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Lmnb2P21619 596 aaKnown RBP12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Ell2Q3UKU1 639 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Vmn1r218Q8R261 298 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 HdlbpQ8VDJ3 1268 aaKnown RBP12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Ankrd1Q9CR42 319 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Plekho1Q9JIY0 408 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Kank3Q9Z1P7 791 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Alox15P39654 663 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Wfs1P56695 890 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Gjb2Q00977 226 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Oxr1Q4KMM3 866 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 PnocQ64387 187 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Me3Q8BMF3 604 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 ClasrpQ8CFC7 668 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Mettl5Q8K1A0 209 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Atp11cQ9QZW0 1129 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Aox1O54754 1333 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Myo3bQ1EG27 1305 aa12.9□□□□□ -0.34
Trim55-201ENSMUST00000029139 Ppfia3P60469 1194 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Tmem109Q3UBX0 243 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Rsrp1Q3UC65 298 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Cdkl5Q3UTQ8 938 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Kif5bQ61768 963 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Gimap6Q8K349 305 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Gga1Q8R0H9 635 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Tut1Q8R3F9 869 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Bzw2Q91VK1 419 aaKnown RBP12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Pcdhb15Q91Y04 786 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ehbp1l1Q99MS7 1716 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Nsd3Q6P2L6 1439 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Vmn2r78K7N6U5 853 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Diaph1O08808 1255 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Nlrp9cQ66X01 1004 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Bicd1Q8BR07 835 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Emilin2Q8K482 1074 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 RestQ8VIG1 1082 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Srgap1Q91Z69 1062 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Atp6v1g2Q9WTT4 118 aa12.89□□□□□ -0.35
Trim55-201ENSMUST00000029139 Bpifb4A2BGH0 617 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Il27raO70394 623 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Trim43cP86449 446 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Dnajc8Q6NZB0 253 aaKnown RBP12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Usp20Q8C6M1 916 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Spire2Q8K1S6 718 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 HibchQ8QZS1 385 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Pcdhga10Q91XY9 930 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Smarca5Q91ZW3 1051 aaKnown RBP12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ferd3lQ923Z4 168 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 NwcQ9CQI4 244 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Pde3aQ9Z0X4 1141 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Nphp3Q7TNH6 1325 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Pola1P33609 1465 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Pdrg1P59048 133 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Csrnp1P59054 583 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Mphosph8Q3TYA6 858 aaKnown RBP12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Fnbp1Q80TY0 616 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 N4bp3Q8C7U1 537 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Dnm1lQ8K1M6 742 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 MypopQ8R4U1 393 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Batf3Q9D275 118 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Speer3W4VSP1 261 aa12.88□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ms4a2P20490 235 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Nat2P50295 290 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Yy1Q00899 414 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Q3V0E1 1183 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Sapcd2Q9D818 391 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Scgb2b20Q9JI02 112 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Adamtsl1Q8BLI0 1745 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Sall3Q62255 1320 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Pla2g4aP47713 748 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 MpripP97434 1024 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Pabpc4Q6PHQ9 660 aaKnown RBP12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Mfn1Q811U4 741 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Nudt13Q8JZU0 352 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Ecel1Q9JMI0 775 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Sept3Q9Z1S5 350 aa12.87□□□□□ -0.35
Trim55-201ENSMUST00000029139 Gcom1E9PZ54 550 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 CltaO08585 235 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Abcd1P48410 736 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Btg3P50615 252 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Top1Q04750 767 aaKnown RBP12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 MyzapQ3UIJ9 466 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Mks1Q5SW45 561 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Plekhm2Q80TQ5 1018 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Prune1Q8BIW1 454 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Tmco1Q921L3 188 aaKnown RBP12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Tubgcp4Q9D4F8 667 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Itsn2Q9Z0R6 1659 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 LdhaP06151 332 aaKnown RBP12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Xrcc6P23475 608 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Kif5cP28738 956 aaKnown RBP12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Psmc4P54775 418 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Arhgap17Q3UIA2 846 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Serpinb1cQ5SV42 375 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Adck2Q6NSR3 617 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 Fam13aQ8BGI4 693 aa12.86□□□□□ -0.35
Trim55-201ENSMUST00000029139 LzicQ8K3C3 190 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 331.6 ms