RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 E9QMW4 1145 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Vmn2r78K7N6U5 853 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Hoxa7P02830 229 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Pde6bP23440 856 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Eif5P59325 429 aaKnown RBP12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Trim80Q3V061 624 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Mybpc2Q5XKE0 1136 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 NntQ61941 1086 aaKnown RBP12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ovgp1Q62010 721 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Klhl23Q6GQU2 558 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Slfnl1Q8BHW9 410 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Aldh5a1Q8BWF0 523 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Slx1bQ8BX32 270 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Mettl5Q8K1A0 209 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Pex19Q8VCI5 299 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Mrpl12Q9DB15 201 aaKnown RBP12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Hdac6Q9Z2V5 1149 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Pde8aO88502 823 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Stim1P70302 685 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Dcaf5Q80T85 946 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Adcy3Q8VHH7 1145 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Tgs1Q923W1 853 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Psrc1Q9D0P7 329 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Gkap1Q9JMB0 366 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Add2Q9QYB8 725 aa12.98□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Etnk2A7MCT6 385 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 AK157302I3ITR1 129 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Atp8b1Q148W0 1251 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ccdc129Q14B48 1034 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Zfp317Q8C0Q5 607 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Rbm17Q8JZX4 405 aaKnown RBP12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Usp33Q8R5K2 909 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Pcdhb3Q91XZ7 784 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Nop2Q922K7 793 aaKnown RBP12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Fam173bQ9D1Z3 247 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Isca1Q9D924 129 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 VeztQ3ZK22 780 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Itga6Q61739 1091 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Cdc23Q8BGZ4 597 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Gpatch3Q8BIY1 525 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ddx60E9PZQ1 1711 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 A0A1W2P6Q8 802 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Gm9048A0A1W2P7H4 802 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 A0A1W2P7S8 802 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 A0A1W2P7Z8 802 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Gm9046A0A1W2P855 802 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 FanccP50652 591 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Lrrn4P59383 733 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Mum1l1Q4VA55 681 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Cdc5lQ6A068 802 aaKnown RBP12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 BcrQ6PAJ1 1270 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Stkld1Q80YS9 662 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ttc12Q8BW49 704 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Exd1Q8CDF7 570 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Atf7Q8R0S1 413 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Zbtb1Q91VL9 713 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Lrrfip2Q91WK0 415 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Ebag9Q9D0V7 213 aa12.97□□□□□ -0.33
Sdc1-201ENSMUST00000020911 TnksQ6PFX9 1320 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Nphp3Q7TNH6 1325 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Spout1Q3UHX9 385 aaKnown RBP12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Atg9aQ68FE2 551 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Mpp4Q6P7F1 635 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Necab1Q8BG18 352 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Eno4Q8C042 619 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Brd3Q8K2F0 726 aaKnown RBP12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Tnks1bp1P58871 1720 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Irgm2A0A140LIF8 407 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 RalgdsQ03385 852 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 PnocQ64387 187 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Apbb1ipQ8R5A3 670 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Cep57l1Q8VDS7 400 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 RabggtaQ9JHK4 567 aa12.96□□□□□ -0.33
Sdc1-201ENSMUST00000020911 Eya2O08575 532 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Serpinb6dQ3UWK8 375 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Miga2Q8BK03 593 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Tcp11l1Q8BTG3 509 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Tmc2Q8R4P4 888 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Rrp1bQ91YK2 724 aaKnown RBP12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Ccer1Q9CQL2 403 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 PhaxQ9JJT9 385 aaKnown RBP12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Stat2Q9WVL2 923 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Foxn2E9Q7L6 429 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Ccdc138Q0VF22 680 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Hand2Q61039 217 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Ppp4r3aQ6P2K6 820 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 PolnQ7TQ07 864 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Ranbp17Q99NF8 1088 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Psma5Q9Z2U1 241 aaKnown RBP12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Abca15E9PWH4 1668 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Myo1eE9Q634 1107 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Zfy1P10925 782 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Gsdma2Q32M21 443 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Fam71bQ5STT6 665 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Sik1Q60670 779 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Ptcd1Q8C2E4 695 aaKnown RBP12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Rabgef1Q9JM13 491 aa12.95□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Prl7a2O54831 253 aa12.94□□□□□ -0.34
Sdc1-201ENSMUST00000020911 NfkbibQ60778 359 aa12.94□□□□□ -0.34
Sdc1-201ENSMUST00000020911 Hps3Q91VB4 1002 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms