RNA–Protein interactions for RNA: ENSMUST00000173722.7

Lig3-211, Transcript of DNA ligase 3, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Lig3, Length 5,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-211ENSMUST00000173722 Stab2Q8R4U0 2559 aa5.35□□□□□ -1.55
Lig3-211ENSMUST00000173722 Zfhx4Q9JJN2 3550 aa5.35□□□□□ -1.55
Lig3-211ENSMUST00000173722 Gm10139O88245 57 aa5.35□□□□□ -1.55
Lig3-211ENSMUST00000173722 Gm16253D3Z167 63 aa5.35□□□□□ -1.55
Lig3-211ENSMUST00000173722 Akap9Q70FJ1 3797 aa5.34□□□□□ -1.55
Lig3-211ENSMUST00000173722 Gm21887J3QQ04 176 aa5.34□□□□□ -1.56
Lig3-211ENSMUST00000173722 Gm9112A2AI92 75 aa5.32□□□□□ -1.56
Lig3-211ENSMUST00000173722 Gm3646F6S692 53 aa5.32□□□□□ -1.56
Lig3-211ENSMUST00000173722 Tnp1P10856 55 aa5.32□□□□□ -1.56
Lig3-211ENSMUST00000173722 A730071L15RikQ8C4X0 137 aa5.32□□□□□ -1.56
Lig3-211ENSMUST00000173722 Cox6b2Q80ZN9 88 aa5.31□□□□□ -1.56
Lig3-211ENSMUST00000173722 Chd9Q8BYH8 2885 aa5.3□□□□□ -1.56
Lig3-211ENSMUST00000173722 Tex15F8VPN2 2785 aa5.29□□□□□ -1.56
Lig3-211ENSMUST00000173722 Nf1Q04690 2841 aa5.27□□□□□ -1.57
Lig3-211ENSMUST00000173722 Krtap29-1A2A5X4 342 aa5.27□□□□□ -1.57
Lig3-211ENSMUST00000173722 4933415A04RikQ9D443 101 aa5.25□□□□□ -1.57
Lig3-211ENSMUST00000173722 Gm2310J3QNJ2 377 aa5.24□□□□□ -1.57
Lig3-211ENSMUST00000173722 Srrm2Q8BTI8 2703 aaKnown RBP5.24□□□□□ -1.57
Lig3-211ENSMUST00000173722 Sprr1aQ62266 144 aa5.23□□□□□ -1.57
Lig3-211ENSMUST00000173722 Muc5acE9QAQ8 3455 aa5.22□□□□□ -1.57
Lig3-211ENSMUST00000173722 Krtap10-4Q08EG8 221 aa5.22□□□□□ -1.57
Lig3-211ENSMUST00000173722 Krtap13O88375 197 aa5.21□□□□□ -1.57
Lig3-211ENSMUST00000173722 Lama5Q61001 3718 aa5.21□□□□□ -1.58
Lig3-211ENSMUST00000173722 1700042G07RikB1AUF7 90 aa5.21□□□□□ -1.58
Lig3-211ENSMUST00000173722 Pdzd2E9Q1M1 2796 aa5.16□□□□□ -1.58
Lig3-211ENSMUST00000173722 Krtap10-10A0A1W2P7T6 217 aa5.14□□□□□ -1.59
Lig3-211ENSMUST00000173722 Helz2E9QAM5 2947 aaKnown RBP5.13□□□□□ -1.59
Lig3-211ENSMUST00000173722 Tnp2P11378 117 aa5.12□□□□□ -1.59
Lig3-211ENSMUST00000173722 2310061N02RikQ9D6S9 174 aa5.12□□□□□ -1.59
Lig3-211ENSMUST00000173722 Rps29P62274 56 aa5.11□□□□□ -1.59
Lig3-211ENSMUST00000173722 Zfhx3Q61329 3726 aa5.11□□□□□ -1.59
Lig3-211ENSMUST00000173722 ApcQ61315 2845 aa5.1□□□□□ -1.59
Lig3-211ENSMUST00000173722 OtogO55225 2910 aa5.09□□□□□ -1.59
Lig3-211ENSMUST00000173722 Smg1Q8BKX6 3658 aaKnown RBP5.09□□□□□ -1.6
Lig3-211ENSMUST00000173722 Gm2696A0A1W2P709 240 aa5.07□□□□□ -1.6
Lig3-211ENSMUST00000173722 Fbn1Q61554 2873 aaKnown RBP5.07□□□□□ -1.6
Lig3-211ENSMUST00000173722 Gm40193A0A1B0GT39 78 aa5.04□□□□□ -1.6
Lig3-211ENSMUST00000173722 Tenm1Q9WTS4 2731 aa5.04□□□□□ -1.6
Lig3-211ENSMUST00000173722 2310057N15RikQ9D6T8 200 aa5.04□□□□□ -1.6
Lig3-211ENSMUST00000173722 Gm884A2A9H6 3643 aa5□□□□□ -1.61
Lig3-211ENSMUST00000173722 4933428G20RikQ9D3X4 101 aa4.99□□□□□ -1.61
Lig3-211ENSMUST00000173722 Megf8P60882 2789 aa4.98□□□□□ -1.61
Lig3-211ENSMUST00000173722 Krtap14O08640 167 aa4.98□□□□□ -1.61
Lig3-211ENSMUST00000173722 Gm5965D3Z724 196 aa4.97□□□□□ -1.61
Lig3-211ENSMUST00000173722 Ank2Q8C8R3 3898 aa4.96□□□□□ -1.62
Lig3-211ENSMUST00000173722 Tenm2Q9WTS5 2764 aa4.95□□□□□ -1.62
Lig3-211ENSMUST00000173722 D6Ertd527eA0A0N4SWI3 464 aa4.93□□□□□ -1.62
Lig3-211ENSMUST00000173722 A930033H14RikG5E8X6 103 aa4.91□□□□□ -1.62
Lig3-211ENSMUST00000173722 Col7a1Q63870 2944 aa4.9□□□□□ -1.63
Lig3-211ENSMUST00000173722 Csmd1Q923L3 3564 aa4.89□□□□□ -1.63
Lig3-211ENSMUST00000173722 SpenQ62504 3644 aaKnown RBP4.88□□□□□ -1.63
Lig3-211ENSMUST00000173722 Gm9918Q8BUR5 174 aa4.87□□□□□ -1.63
Lig3-211ENSMUST00000173722 Prm2P07978 107 aa4.85□□□□□ -1.63
Lig3-211ENSMUST00000173722 Cmya5Q70KF4 3739 aa4.84□□□□□ -1.63
Lig3-211ENSMUST00000173722 Svep1A2AVA0 3567 aa4.84□□□□□ -1.64
Lig3-211ENSMUST00000173722 TgO08710 2766 aa4.83□□□□□ -1.64
Lig3-211ENSMUST00000173722 Muc6Q80T03 2850 aa4.78□□□□□ -1.64
Lig3-211ENSMUST00000173722 VwfQ8CIZ8 2813 aa4.76□□□□□ -1.65
Lig3-211ENSMUST00000173722 Muc4Q8JZM8 3443 aa4.72□□□□□ -1.65
Lig3-211ENSMUST00000173722 B930094E09RikQ8C4T2 136 aa4.72□□□□□ -1.65
Lig3-211ENSMUST00000173722 Csmd2V9GX34 3611 aa4.7□□□□□ -1.66
Lig3-211ENSMUST00000173722 LystP97412 3788 aa4.64□□□□□ -1.67
Lig3-211ENSMUST00000173722 Gm20537G3UYK7 97 aa4.55□□□□□ -1.68
Lig3-211ENSMUST00000173722 Dnah14A0A140LIJ4 4489 aa4.54□□□□□ -1.68
Lig3-211ENSMUST00000173722 Gm9736A0A1W2P7N1 277 aa4.53□□□□□ -1.68
Lig3-211ENSMUST00000173722 2310079G19RikQ9D6L6 185 aa4.52□□□□□ -1.69
Lig3-211ENSMUST00000173722 BsnO88737 3942 aa4.5□□□□□ -1.69
Lig3-211ENSMUST00000173722 Krtap19-5O08632 62 aa4.48□□□□□ -1.69
Lig3-211ENSMUST00000173722 Huwe1Q7TMY8 4377 aaKnown RBP4.48□□□□□ -1.69
Lig3-211ENSMUST00000173722 TnxbO35452 4006 aa4.47□□□□□ -1.69
Lig3-211ENSMUST00000173722 Gm17402F6Z0L5 76 aa4.44□□□□□ -1.7
Lig3-211ENSMUST00000173722 Gm19668J3QMD1 248 aa4.44□□□□□ -1.7
Lig3-211ENSMUST00000173722 Gm17416Q30KP4 66 aa4.44□□□□□ -1.7
Lig3-211ENSMUST00000173722 2210017I01RikA0A0A6YVV1 95 aa4.42□□□□□ -1.7
Lig3-211ENSMUST00000173722 Gm6358A0A087WPH4 74 aa4.41□□□□□ -1.7
Lig3-211ENSMUST00000173722 Sprr2kO70562 68 aa4.38□□□□□ -1.71
Lig3-211ENSMUST00000173722 Xirp2Q4U4S6 3784 aa4.36□□□□□ -1.71
Lig3-211ENSMUST00000173722 CubnQ9JLB4 3623 aa4.36□□□□□ -1.71
Lig3-211ENSMUST00000173722 Gm18596A0A1W2P860 280 aa4.32□□□□□ -1.72
Lig3-211ENSMUST00000173722 Gm10318A0A1W2P728 225 aa4.3□□□□□ -1.72
Lig3-211ENSMUST00000173722 Dnah10D3YYQ8 4591 aa4.27□□□□□ -1.73
Lig3-211ENSMUST00000173722 PlecQ9QXS1 4691 aaKnown RBP4.26□□□□□ -1.73
Lig3-211ENSMUST00000173722 PrkdcP97313 4128 aa4.24□□□□□ -1.73
Lig3-211ENSMUST00000173722 Vps13dB1ART2 4390 aa4.24□□□□□ -1.73
Lig3-211ENSMUST00000173722 Ryr1E9PZQ0 5035 aa4.24□□□□□ -1.73
Lig3-211ENSMUST00000173722 Dnah17Q69Z23 4481 aa4.23□□□□□ -1.73
Lig3-211ENSMUST00000173722 Crct1Q6PAI5 102 aa4.21□□□□□ -1.74
Lig3-211ENSMUST00000173722 Dnah5Q8VHE6 4621 aa4.21□□□□□ -1.74
Lig3-211ENSMUST00000173722 Sprr2gO70558 76 aa4.2□□□□□ -1.74
Lig3-211ENSMUST00000173722 Hspg2Q05793 3707 aaKnown RBP4.19□□□□□ -1.74
Lig3-211ENSMUST00000173722 Gm19402J3QJV4 266 aa4.18□□□□□ -1.74
Lig3-211ENSMUST00000173722 Dnah6E9Q0B6 4144 aa4.17□□□□□ -1.74
Lig3-211ENSMUST00000173722 Lce1mQ9CR91 182 aa4.17□□□□□ -1.74
Lig3-211ENSMUST00000173722 Krtap3-2Q9D638 99 aa4.17□□□□□ -1.74
Lig3-211ENSMUST00000173722 Krtap3-3Q9D7P0 99 aa4.17□□□□□ -1.74
Lig3-211ENSMUST00000173722 Stard9Q80TF6 4561 aa4.16□□□□□ -1.74
Lig3-211ENSMUST00000173722 Dync2h1Q45VK7 4306 aa4.16□□□□□ -1.74
Lig3-211ENSMUST00000173722 Krtap8-1O08633 61 aa4.16□□□□□ -1.74
Lig3-211ENSMUST00000173722 Dync1h1Q9JHU4 4644 aaKnown RBP4.14□□□□□ -1.75
Lig3-211ENSMUST00000173722 Gm11939A2A592 99 aa4.12□□□□□ -1.75
Retrieved 100 of 22,080 RNA–protein pairs in 104.1 ms