RNA–Protein interactions for RNA: ENSMUST00000171108.7

Rai1-207, Transcript of Retinoic acid-induced protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rai1, Length 7,125 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-207ENSMUST00000171108 9530053A07RikE9PVG8 2581 aa6.56□□□□□ -1.36
Rai1-207ENSMUST00000171108 Nbeal2Q6ZQA0 2742 aa6.56□□□□□ -1.36
Rai1-207ENSMUST00000171108 Itpr1P11881 2749 aa6.53□□□□□ -1.36
Rai1-207ENSMUST00000171108 SpenQ62504 3644 aaKnown RBP6.53□□□□□ -1.36
Rai1-207ENSMUST00000171108 Itpr2Q9Z329 2701 aa6.53□□□□□ -1.36
Rai1-207ENSMUST00000171108 Tnp1P10856 55 aa6.52□□□□□ -1.37
Rai1-207ENSMUST00000171108 Zfhx4Q9JJN2 3550 aa6.51□□□□□ -1.37
Rai1-207ENSMUST00000171108 Ubr5Q80TP3 2792 aa6.49□□□□□ -1.37
Rai1-207ENSMUST00000171108 Ndufaf8A2AMZ4 74 aa6.48□□□□□ -1.37
Rai1-207ENSMUST00000171108 Stab2Q8R4U0 2559 aa6.48□□□□□ -1.37
Rai1-207ENSMUST00000171108 Gm884A2A9H6 3643 aa6.47□□□□□ -1.37
Rai1-207ENSMUST00000171108 Myo15bI7HPW8 3033 aa6.46□□□□□ -1.38
Rai1-207ENSMUST00000171108 Utp20Q5XG71 2788 aaKnown RBP6.44□□□□□ -1.38
Rai1-207ENSMUST00000171108 RelnQ60841 3461 aa6.42□□□□□ -1.38
Rai1-207ENSMUST00000171108 A930033H14RikG5E8X6 103 aa6.41□□□□□ -1.38
Rai1-207ENSMUST00000171108 DspE9Q557 2883 aaKnown RBP6.41□□□□□ -1.38
Rai1-207ENSMUST00000171108 ApcQ61315 2845 aa6.41□□□□□ -1.38
Rai1-207ENSMUST00000171108 Smg1Q8BKX6 3658 aaKnown RBP6.4□□□□□ -1.38
Rai1-207ENSMUST00000171108 Gm40193A0A1B0GT39 78 aa6.4□□□□□ -1.39
Rai1-207ENSMUST00000171108 Dmxl2Q8BPN8 3032 aa6.38□□□□□ -1.39
Rai1-207ENSMUST00000171108 Cmya5Q70KF4 3739 aa6.37□□□□□ -1.39
Rai1-207ENSMUST00000171108 Igfn1Q3KNY0 2849 aa6.33□□□□□ -1.4
Rai1-207ENSMUST00000171108 Muc2Q80Z19 2680 aa6.32□□□□□ -1.4
Rai1-207ENSMUST00000171108 NbeaQ9EPN1 2936 aa6.32□□□□□ -1.4
Rai1-207ENSMUST00000171108 Col6a5A6H584 2640 aa6.31□□□□□ -1.4
Rai1-207ENSMUST00000171108 Pkd1l1Q8R526 2615 aa6.3□□□□□ -1.4
Rai1-207ENSMUST00000171108 Srrm2Q8BTI8 2703 aaKnown RBP6.3□□□□□ -1.4
Rai1-207ENSMUST00000171108 TgO08710 2766 aa6.27□□□□□ -1.41
Rai1-207ENSMUST00000171108 Gm20537G3UYK7 97 aa6.26□□□□□ -1.41
Rai1-207ENSMUST00000171108 Zzef1Q5SSH7 2924 aa6.24□□□□□ -1.41
Rai1-207ENSMUST00000171108 Gm9112A2AI92 75 aa6.24□□□□□ -1.41
Rai1-207ENSMUST00000171108 B930094E09RikQ8C4T2 136 aa6.22□□□□□ -1.41
Rai1-207ENSMUST00000171108 FcgbpE9Q0B5 2583 aa6.22□□□□□ -1.41
Rai1-207ENSMUST00000171108 Lama5Q61001 3718 aa6.2□□□□□ -1.42
Rai1-207ENSMUST00000171108 Tex15F8VPN2 2785 aa6.2□□□□□ -1.42
Rai1-207ENSMUST00000171108 Gm9736A0A1W2P7N1 277 aa6.18□□□□□ -1.42
Rai1-207ENSMUST00000171108 Hivep1Q03172 2688 aa6.18□□□□□ -1.42
Rai1-207ENSMUST00000171108 Tenm4Q3UHK6 2771 aa6.16□□□□□ -1.42
Rai1-207ENSMUST00000171108 Gm9918Q8BUR5 174 aa6.15□□□□□ -1.42
Rai1-207ENSMUST00000171108 Trank1Q8BV79 2999 aa6.15□□□□□ -1.43
Rai1-207ENSMUST00000171108 2310079G19RikQ9D6L6 185 aa6.15□□□□□ -1.43
Rai1-207ENSMUST00000171108 Prm2P07978 107 aa6.08□□□□□ -1.44
Rai1-207ENSMUST00000171108 Muc5acE9QAQ8 3455 aa6.08□□□□□ -1.44
Rai1-207ENSMUST00000171108 Svep1A2AVA0 3567 aa6.07□□□□□ -1.44
Rai1-207ENSMUST00000171108 Gm17416Q30KP4 66 aa6.06□□□□□ -1.44
Rai1-207ENSMUST00000171108 Celsr2Q9R0M0 2920 aa6.02□□□□□ -1.44
Rai1-207ENSMUST00000171108 Csmd2V9GX34 3611 aa6□□□□□ -1.45
Rai1-207ENSMUST00000171108 Pdzd2E9Q1M1 2796 aa5.99□□□□□ -1.45
Rai1-207ENSMUST00000171108 Gm10318A0A1W2P728 225 aa5.98□□□□□ -1.45
Rai1-207ENSMUST00000171108 LrbaQ9ESE1 2856 aa5.97□□□□□ -1.45
Rai1-207ENSMUST00000171108 Gm17402F6Z0L5 76 aa5.96□□□□□ -1.46
Rai1-207ENSMUST00000171108 Chd9Q8BYH8 2885 aa5.93□□□□□ -1.46
Rai1-207ENSMUST00000171108 2210017I01RikA0A0A6YVV1 95 aa5.93□□□□□ -1.46
Rai1-207ENSMUST00000171108 FlncQ8VHX6 2726 aaKnown RBP5.92□□□□□ -1.46
Rai1-207ENSMUST00000171108 Nf1Q04690 2841 aa5.89□□□□□ -1.47
Rai1-207ENSMUST00000171108 Tenm1Q9WTS4 2731 aa5.88□□□□□ -1.47
Rai1-207ENSMUST00000171108 Tenm3Q9WTS6 2715 aa5.86□□□□□ -1.47
Rai1-207ENSMUST00000171108 Crct1Q6PAI5 102 aa5.82□□□□□ -1.48
Rai1-207ENSMUST00000171108 Tenm2Q9WTS5 2764 aa5.81□□□□□ -1.48
Rai1-207ENSMUST00000171108 Gm19668J3QMD1 248 aa5.81□□□□□ -1.48
Rai1-207ENSMUST00000171108 4933428G20RikQ9D3X4 101 aa5.81□□□□□ -1.48
Rai1-207ENSMUST00000171108 Ank2Q8C8R3 3898 aa5.8□□□□□ -1.48
Rai1-207ENSMUST00000171108 OtogO55225 2910 aa5.79□□□□□ -1.48
Rai1-207ENSMUST00000171108 Muc4Q8JZM8 3443 aa5.77□□□□□ -1.49
Rai1-207ENSMUST00000171108 Krtap19-5O08632 62 aa5.71□□□□□ -1.5
Rai1-207ENSMUST00000171108 LystP97412 3788 aa5.7□□□□□ -1.5
Rai1-207ENSMUST00000171108 Gm11939A2A592 99 aa5.68□□□□□ -1.5
Rai1-207ENSMUST00000171108 Krtap13-1Q8K198 168 aa5.67□□□□□ -1.5
Rai1-207ENSMUST00000171108 Helz2E9QAM5 2947 aaKnown RBP5.66□□□□□ -1.5
Rai1-207ENSMUST00000171108 CubnQ9JLB4 3623 aa5.61□□□□□ -1.51
Rai1-207ENSMUST00000171108 Hspg2Q05793 3707 aaKnown RBP5.59□□□□□ -1.51
Rai1-207ENSMUST00000171108 BsnO88737 3942 aa5.57□□□□□ -1.52
Rai1-207ENSMUST00000171108 Krtap3-2Q9D638 99 aa5.53□□□□□ -1.52
Rai1-207ENSMUST00000171108 Krtap3-3Q9D7P0 99 aa5.53□□□□□ -1.52
Rai1-207ENSMUST00000171108 Xirp2Q4U4S6 3784 aa5.51□□□□□ -1.53
Rai1-207ENSMUST00000171108 Huwe1Q7TMY8 4377 aaKnown RBP5.5□□□□□ -1.53
Rai1-207ENSMUST00000171108 Krtap3-1A2A591 98 aa5.5□□□□□ -1.53
Rai1-207ENSMUST00000171108 Gm6358A0A087WPH4 74 aa5.48□□□□□ -1.53
Rai1-207ENSMUST00000171108 Csmd3Q80T79 3707 aa5.47□□□□□ -1.53
Rai1-207ENSMUST00000171108 Megf8P60882 2789 aa5.47□□□□□ -1.53
Rai1-207ENSMUST00000171108 VwfQ8CIZ8 2813 aa5.45□□□□□ -1.54
Rai1-207ENSMUST00000171108 Fbn1Q61554 2873 aaKnown RBP5.44□□□□□ -1.54
Rai1-207ENSMUST00000171108 Dnah14A0A140LIJ4 4489 aa5.34□□□□□ -1.55
Rai1-207ENSMUST00000171108 Sprr2kO70562 68 aa5.28□□□□□ -1.56
Rai1-207ENSMUST00000171108 Col7a1Q63870 2944 aa5.27□□□□□ -1.57
Rai1-207ENSMUST00000171108 Krtap8-1O08633 61 aa5.26□□□□□ -1.57
Rai1-207ENSMUST00000171108 Gm18596A0A1W2P860 280 aa5.26□□□□□ -1.57
Rai1-207ENSMUST00000171108 Krtap19-9aF8WH65 55 aa5.19□□□□□ -1.58
Rai1-207ENSMUST00000171108 Krtap7-1Q9D3I6 87 aa5.16□□□□□ -1.58
Rai1-207ENSMUST00000171108 Krtap1-5A2A590 122 aa5.15□□□□□ -1.59
Rai1-207ENSMUST00000171108 Sprr2a3Q4KL71 83 aa5.14□□□□□ -1.59
Rai1-207ENSMUST00000171108 Sprr2a1Q9CQK8 83 aa5.14□□□□□ -1.59
Rai1-207ENSMUST00000171108 LorP18165 486 aa5.13□□□□□ -1.59
Rai1-207ENSMUST00000171108 Dnah10D3YYQ8 4591 aa5.12□□□□□ -1.59
Rai1-207ENSMUST00000171108 Gm19402J3QJV4 266 aa5.03□□□□□ -1.6
Rai1-207ENSMUST00000171108 Dnah7bL7N1Y0 4068 aa5.03□□□□□ -1.6
Rai1-207ENSMUST00000171108 Muc6Q80T03 2850 aa5.02□□□□□ -1.61
Rai1-207ENSMUST00000171108 Krtap1-4Q3V2D6 188 aa5.02□□□□□ -1.61
Rai1-207ENSMUST00000171108 Sprr2gO70558 76 aa4.99□□□□□ -1.61
Rai1-207ENSMUST00000171108 Krtap19-9bQ99NG9 58 aa4.98□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 75 ms