RNA–Protein interactions for RNA: ENSMUST00000097653.10

Col6a3-202, Transcript of Collagen, type VI, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a3, Length 9,001 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-202ENSMUST00000097653 Tenm1Q9WTS4 2731 aa6.44□□□□□ -1.38
Col6a3-202ENSMUST00000097653 SpegQ62407 3262 aa6.42□□□□□ -1.38
Col6a3-202ENSMUST00000097653 Gm19426M0QWC7 77 aa6.41□□□□□ -1.38
Col6a3-202ENSMUST00000097653 DmdP11531 3678 aa6.4□□□□□ -1.38
Col6a3-202ENSMUST00000097653 Gm40193A0A1B0GT39 78 aa6.39□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Gm7138L7N2C3 230 aa6.38□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Gm3238W4VSP7 230 aa6.38□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Gm9112A2AI92 75 aa6.37□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Gm16253D3Z167 63 aa6.37□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Wdfy3Q6VNB8 3508 aa6.34□□□□□ -1.39
Col6a3-202ENSMUST00000097653 Gm5767A0A0J9YTU8 78 aa6.33□□□□□ -1.4
Col6a3-202ENSMUST00000097653 Gm7137J3QMW1 236 aa6.31□□□□□ -1.4
Col6a3-202ENSMUST00000097653 Krtap29-1A2A5X4 342 aa6.29□□□□□ -1.4
Col6a3-202ENSMUST00000097653 2310050C09RikG5E8Z3 280 aa6.28□□□□□ -1.4
Col6a3-202ENSMUST00000097653 Helz2E9QAM5 2947 aaKnown RBP6.27□□□□□ -1.41
Col6a3-202ENSMUST00000097653 Tenm3Q9WTS6 2715 aa6.25□□□□□ -1.41
Col6a3-202ENSMUST00000097653 SpenQ62504 3644 aaKnown RBP6.25□□□□□ -1.41
Col6a3-202ENSMUST00000097653 SmcpP15265 143 aa6.23□□□□□ -1.41
Col6a3-202ENSMUST00000097653 RelnQ60841 3461 aa6.22□□□□□ -1.41
Col6a3-202ENSMUST00000097653 Gm17349F7BGH6 99 aa6.21□□□□□ -1.41
Col6a3-202ENSMUST00000097653 Gm9508A0A1W2P7W0 230 aa6.21□□□□□ -1.42
Col6a3-202ENSMUST00000097653 OtogO55225 2910 aa6.2□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Csmd1Q923L3 3564 aa6.2□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Rps29P62274 56 aa6.19□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Smg1Q8BKX6 3658 aaKnown RBP6.18□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Cmya5Q70KF4 3739 aa6.18□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Tnp1P10856 55 aa6.18□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Tenm4Q3UHK6 2771 aa6.16□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Gm36176A0A1W2P8D5 158 aa6.15□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Gm2310J3QNJ2 377 aa6.15□□□□□ -1.42
Col6a3-202ENSMUST00000097653 Lama5Q61001 3718 aa6.12□□□□□ -1.43
Col6a3-202ENSMUST00000097653 Krtap13O88375 197 aa6.11□□□□□ -1.43
Col6a3-202ENSMUST00000097653 Muc5acE9QAQ8 3455 aa6.05□□□□□ -1.44
Col6a3-202ENSMUST00000097653 Gm21887J3QQ04 176 aa6.05□□□□□ -1.44
Col6a3-202ENSMUST00000097653 VwfQ8CIZ8 2813 aa6.02□□□□□ -1.45
Col6a3-202ENSMUST00000097653 Gm884A2A9H6 3643 aa6.01□□□□□ -1.45
Col6a3-202ENSMUST00000097653 Krtap14O08640 167 aa6.01□□□□□ -1.45
Col6a3-202ENSMUST00000097653 Zfhx4Q9JJN2 3550 aa5.97□□□□□ -1.45
Col6a3-202ENSMUST00000097653 Fbn1Q61554 2873 aaKnown RBP5.97□□□□□ -1.45
Col6a3-202ENSMUST00000097653 2310061N02RikQ9D6S9 174 aa5.96□□□□□ -1.46
Col6a3-202ENSMUST00000097653 Tnp2P11378 117 aa5.93□□□□□ -1.46
Col6a3-202ENSMUST00000097653 Megf8P60882 2789 aa5.93□□□□□ -1.46
Col6a3-202ENSMUST00000097653 Ank2Q8C8R3 3898 aa5.93□□□□□ -1.46
Col6a3-202ENSMUST00000097653 Gm9507D3Z5T3 223 aa5.88□□□□□ -1.47
Col6a3-202ENSMUST00000097653 Col7a1Q63870 2944 aa5.88□□□□□ -1.47
Col6a3-202ENSMUST00000097653 D6Ertd527eA0A0N4SWI3 464 aa5.87□□□□□ -1.47
Col6a3-202ENSMUST00000097653 Csmd2V9GX34 3611 aa5.85□□□□□ -1.47
Col6a3-202ENSMUST00000097653 Tenm2Q9WTS5 2764 aa5.82□□□□□ -1.48
Col6a3-202ENSMUST00000097653 Krtap10-4Q08EG8 221 aa5.77□□□□□ -1.49
Col6a3-202ENSMUST00000097653 Gm5965D3Z724 196 aa5.74□□□□□ -1.49
Col6a3-202ENSMUST00000097653 2310057N15RikQ9D6T8 200 aa5.73□□□□□ -1.49
Col6a3-202ENSMUST00000097653 Krtap10-10A0A1W2P7T6 217 aa5.68□□□□□ -1.5
Col6a3-202ENSMUST00000097653 Svep1A2AVA0 3567 aa5.67□□□□□ -1.5
Col6a3-202ENSMUST00000097653 Prm2P07978 107 aa5.67□□□□□ -1.5
Col6a3-202ENSMUST00000097653 Gm20537G3UYK7 97 aa5.64□□□□□ -1.51
Col6a3-202ENSMUST00000097653 B930094E09RikQ8C4T2 136 aa5.63□□□□□ -1.51
Col6a3-202ENSMUST00000097653 Gm17416Q30KP4 66 aa5.61□□□□□ -1.51
Col6a3-202ENSMUST00000097653 Gm17402F6Z0L5 76 aa5.61□□□□□ -1.51
Col6a3-202ENSMUST00000097653 Muc4Q8JZM8 3443 aa5.6□□□□□ -1.51
Col6a3-202ENSMUST00000097653 LystP97412 3788 aa5.58□□□□□ -1.52
Col6a3-202ENSMUST00000097653 Gm2696A0A1W2P709 240 aa5.58□□□□□ -1.52
Col6a3-202ENSMUST00000097653 Muc6Q80T03 2850 aa5.57□□□□□ -1.52
Col6a3-202ENSMUST00000097653 4933428G20RikQ9D3X4 101 aa5.57□□□□□ -1.52
Col6a3-202ENSMUST00000097653 A930033H14RikG5E8X6 103 aa5.54□□□□□ -1.52
Col6a3-202ENSMUST00000097653 2310079G19RikQ9D6L6 185 aa5.5□□□□□ -1.53
Col6a3-202ENSMUST00000097653 Xirp2Q4U4S6 3784 aa5.45□□□□□ -1.54
Col6a3-202ENSMUST00000097653 CubnQ9JLB4 3623 aa5.43□□□□□ -1.54
Col6a3-202ENSMUST00000097653 BsnO88737 3942 aa5.38□□□□□ -1.55
Col6a3-202ENSMUST00000097653 Csmd3Q80T79 3707 aa5.35□□□□□ -1.55
Col6a3-202ENSMUST00000097653 Hspg2Q05793 3707 aaKnown RBP5.28□□□□□ -1.56
Col6a3-202ENSMUST00000097653 Gm9918Q8BUR5 174 aa5.24□□□□□ -1.57
Col6a3-202ENSMUST00000097653 2210017I01RikA0A0A6YVV1 95 aa5.24□□□□□ -1.57
Col6a3-202ENSMUST00000097653 Gm19668J3QMD1 248 aa5.12□□□□□ -1.59
Col6a3-202ENSMUST00000097653 Gm9736A0A1W2P7N1 277 aa5.09□□□□□ -1.59
Col6a3-202ENSMUST00000097653 Gm11939A2A592 99 aa5.01□□□□□ -1.61
Col6a3-202ENSMUST00000097653 Dnah7bL7N1Y0 4068 aa4.95□□□□□ -1.62
Col6a3-202ENSMUST00000097653 Dnah3Q8BW94 4083 aa4.93□□□□□ -1.62
Col6a3-202ENSMUST00000097653 Krtap13-1Q8K198 168 aa4.91□□□□□ -1.62
Col6a3-202ENSMUST00000097653 Krtap3-2Q9D638 99 aa4.89□□□□□ -1.63
Col6a3-202ENSMUST00000097653 Krtap3-3Q9D7P0 99 aa4.89□□□□□ -1.63
Col6a3-202ENSMUST00000097653 Krtap19-5O08632 62 aa4.86□□□□□ -1.63
Col6a3-202ENSMUST00000097653 Vps13bQ80TY5 3993 aa4.84□□□□□ -1.63
Col6a3-202ENSMUST00000097653 Krtap3-1A2A591 98 aa4.84□□□□□ -1.64
Col6a3-202ENSMUST00000097653 Gm10318A0A1W2P728 225 aa4.83□□□□□ -1.64
Col6a3-202ENSMUST00000097653 Kmt2aP55200 3966 aa4.79□□□□□ -1.64
Col6a3-202ENSMUST00000097653 Gm6358A0A087WPH4 74 aa4.77□□□□□ -1.65
Col6a3-202ENSMUST00000097653 Crct1Q6PAI5 102 aa4.77□□□□□ -1.65
Col6a3-202ENSMUST00000097653 PrkdcP97313 4128 aa4.77□□□□□ -1.65
Col6a3-202ENSMUST00000097653 Dnah6E9Q0B6 4144 aa4.67□□□□□ -1.66
Col6a3-202ENSMUST00000097653 TnxbO35452 4006 aa4.65□□□□□ -1.67
Col6a3-202ENSMUST00000097653 Huwe1Q7TMY8 4377 aaKnown RBP4.64□□□□□ -1.67
Col6a3-202ENSMUST00000097653 Sprr2kO70562 68 aa4.64□□□□□ -1.67
Col6a3-202ENSMUST00000097653 Dnah7cA0A087WR13 4024 aa4.64□□□□□ -1.67
Col6a3-202ENSMUST00000097653 Gm18596A0A1W2P860 280 aa4.63□□□□□ -1.67
Col6a3-202ENSMUST00000097653 Krtap8-1O08633 61 aa4.58□□□□□ -1.68
Col6a3-202ENSMUST00000097653 Dnah7aE9Q0T8 4024 aa4.58□□□□□ -1.68
Col6a3-202ENSMUST00000097653 Krtap1-5A2A590 122 aa4.53□□□□□ -1.68
Col6a3-202ENSMUST00000097653 Sprr2a3Q4KL71 83 aa4.53□□□□□ -1.68
Col6a3-202ENSMUST00000097653 Sprr2a1Q9CQK8 83 aa4.53□□□□□ -1.68
Col6a3-202ENSMUST00000097653 Krtap7-1Q9D3I6 87 aa4.53□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms