RNA–Protein interactions for RNA: ENSMUST00000026665.7

Cbx4-201, Transcript of E3 SUMO-protein ligase CBX4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cbx4, Length 5,179 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4-201ENSMUST00000026665 Tenm3Q9WTS6 2715 aa11,85□□□□□ -0,51
Cbx4-201ENSMUST00000026665 Pla2g10Q9QXX3 151 aa11,84□□□□□ -0,51
Cbx4-201ENSMUST00000026665 LrbaQ9ESE1 2856 aa11,84□□□□□ -0,51
Cbx4-201ENSMUST00000026665 Krtap15-1Q9QZU5 150 aa11,79□□□□□ -0,52
Cbx4-201ENSMUST00000026665 Srrm2Q8BTI8 2703 aaKnown RBP11,77□□□□□ -0,53
Cbx4-201ENSMUST00000026665 Gm9507D3Z5T3 223 aa11,75□□□□□ -0,53
Cbx4-201ENSMUST00000026665 Krtap14O08640 167 aa11,75□□□□□ -0,53
Cbx4-201ENSMUST00000026665 Pdzd2E9Q1M1 2796 aa11,74□□□□□ -0,53
Cbx4-201ENSMUST00000026665 Zfhx3Q61329 3726 aa11,7□□□□□ -0,54
Cbx4-201ENSMUST00000026665 Rpl37Q9D823 97 aa11,68□□□□□ -0,54
Cbx4-201ENSMUST00000026665 Spink7Q6IE32 76 aa11,66□□□□□ -0,54
Cbx4-201ENSMUST00000026665 FcgbpE9Q0B5 2583 aa11,64□□□□□ -0,55
Cbx4-201ENSMUST00000026665 Romo1P60603 79 aa11,63□□□□□ -0,55
Cbx4-201ENSMUST00000026665 Helz2E9QAM5 2947 aaKnown RBP11,6□□□□□ -0,55
Cbx4-201ENSMUST00000026665 Gm5767A0A0J9YTU8 78 aa11,59□□□□□ -0,55
Cbx4-201ENSMUST00000026665 Krtap10-4Q08EG8 221 aa11,59□□□□□ -0,55
Cbx4-201ENSMUST00000026665 Csmd1Q923L3 3564 aa11,58□□□□□ -0,55
Cbx4-201ENSMUST00000026665 SpenQ62504 3644 aaKnown RBP11,57□□□□□ -0,56
Cbx4-201ENSMUST00000026665 Tnp2P11378 117 aa11,56□□□□□ -0,56
Cbx4-201ENSMUST00000026665 Tenm4Q3UHK6 2771 aa11,55□□□□□ -0,56
Cbx4-201ENSMUST00000026665 Muc5acE9QAQ8 3455 aa11,52□□□□□ -0,56
Cbx4-201ENSMUST00000026665 Gm10382Q3V0T5 144 aa11,52□□□□□ -0,57
Cbx4-201ENSMUST00000026665 Zfhx4Q9JJN2 3550 aa11,48□□□□□ -0,57
Cbx4-201ENSMUST00000026665 Smg1Q8BKX6 3658 aaKnown RBP11,48□□□□□ -0,57
Cbx4-201ENSMUST00000026665 Cox6b2Q80ZN9 88 aa11,43□□□□□ -0,58
Cbx4-201ENSMUST00000026665 D6Ertd527eA0A0N4SWI3 464 aa11,39□□□□□ -0,59
Cbx4-201ENSMUST00000026665 Krtap10-10A0A1W2P7T6 217 aa11,38□□□□□ -0,59
Cbx4-201ENSMUST00000026665 Lama5Q61001 3718 aa11,34□□□□□ -0,59
Cbx4-201ENSMUST00000026665 Rps29P62274 56 aa11,32□□□□□ -0,6
Cbx4-201ENSMUST00000026665 BC029722A0A0N4SW31 51 aa11,32□□□□□ -0,6
Cbx4-201ENSMUST00000026665 Camk2n1Q6QWF9 78 aa11,3□□□□□ -0,6
Cbx4-201ENSMUST00000026665 Gm884A2A9H6 3643 aa11,25□□□□□ -0,61
Cbx4-201ENSMUST00000026665 OtogO55225 2910 aa11,24□□□□□ -0,61
Cbx4-201ENSMUST00000026665 Fam229aB2KGE5 128 aa11,24□□□□□ -0,61
Cbx4-201ENSMUST00000026665 Gm19426M0QWC7 77 aa11,22□□□□□ -0,61
Cbx4-201ENSMUST00000026665 Sec61bQ9CQS8 96 aaKnown RBP11,2□□□□□ -0,62
Cbx4-201ENSMUST00000026665 Gm2696A0A1W2P709 240 aa11,11□□□□□ -0,63
Cbx4-201ENSMUST00000026665 Tenm1Q9WTS4 2731 aa10,94□□□□□ -0,66
Cbx4-201ENSMUST00000026665 Gm20537G3UYK7 97 aa10,92□□□□□ -0,66
Cbx4-201ENSMUST00000026665 Svep1A2AVA0 3567 aa10,91□□□□□ -0,66
Cbx4-201ENSMUST00000026665 Ndufaf8A2AMZ4 74 aa10,88□□□□□ -0,67
Cbx4-201ENSMUST00000026665 2310079G19RikQ9D6L6 185 aa10,84□□□□□ -0,67
Cbx4-201ENSMUST00000026665 Muc4Q8JZM8 3443 aa10,81□□□□□ -0,68
Cbx4-201ENSMUST00000026665 A930033H14RikG5E8X6 103 aa10,81□□□□□ -0,68
Cbx4-201ENSMUST00000026665 Fbn1Q61554 2873 aaKnown RBP10,79□□□□□ -0,68
Cbx4-201ENSMUST00000026665 Cmya5Q70KF4 3739 aa10,79□□□□□ -0,68
Cbx4-201ENSMUST00000026665 Gm5965D3Z724 196 aa10,78□□□□□ -0,68
Cbx4-201ENSMUST00000026665 Tenm2Q9WTS5 2764 aa10,65□□□□□ -0,7
Cbx4-201ENSMUST00000026665 VwfQ8CIZ8 2813 aa10,64□□□□□ -0,71
Cbx4-201ENSMUST00000026665 Gm21887J3QQ04 176 aa10,58□□□□□ -0,72
Cbx4-201ENSMUST00000026665 Gm40193A0A1B0GT39 78 aa10,47□□□□□ -0,73
Cbx4-201ENSMUST00000026665 Gm9112A2AI92 75 aa10,46□□□□□ -0,74
Cbx4-201ENSMUST00000026665 2310057N15RikQ9D6T8 200 aa10,43□□□□□ -0,74
Cbx4-201ENSMUST00000026665 B930094E09RikQ8C4T2 136 aa10,43□□□□□ -0,74
Cbx4-201ENSMUST00000026665 Megf8P60882 2789 aa10,39□□□□□ -0,75
Cbx4-201ENSMUST00000026665 Col7a1Q63870 2944 aa10,38□□□□□ -0,75
Cbx4-201ENSMUST00000026665 Ank2Q8C8R3 3898 aa10,35□□□□□ -0,75
Cbx4-201ENSMUST00000026665 Csmd2V9GX34 3611 aa10,34□□□□□ -0,75
Cbx4-201ENSMUST00000026665 Gm17416Q30KP4 66 aa10,28□□□□□ -0,76
Cbx4-201ENSMUST00000026665 Tnp1P10856 55 aa10,23□□□□□ -0,77
Cbx4-201ENSMUST00000026665 Gm9736A0A1W2P7N1 277 aa10,2□□□□□ -0,78
Cbx4-201ENSMUST00000026665 Muc6Q80T03 2850 aa10,16□□□□□ -0,78
Cbx4-201ENSMUST00000026665 Gm11939A2A592 99 aa10,14□□□□□ -0,79
Cbx4-201ENSMUST00000026665 2210017I01RikA0A0A6YVV1 95 aa10,13□□□□□ -0,79
Cbx4-201ENSMUST00000026665 Gm9918Q8BUR5 174 aa10,07□□□□□ -0,8
Cbx4-201ENSMUST00000026665 Krtap3-2Q9D638 99 aa10,03□□□□□ -0,8
Cbx4-201ENSMUST00000026665 Krtap3-3Q9D7P0 99 aa10,03□□□□□ -0,8
Cbx4-201ENSMUST00000026665 CubnQ9JLB4 3623 aa9,97□□□□□ -0,81
Cbx4-201ENSMUST00000026665 Prm2P07978 107 aa9,92□□□□□ -0,82
Cbx4-201ENSMUST00000026665 Gm17402F6Z0L5 76 aa9,91□□□□□ -0,82
Cbx4-201ENSMUST00000026665 LystP97412 3788 aa9,9□□□□□ -0,82
Cbx4-201ENSMUST00000026665 Dnah14A0A140LIJ4 4489 aa9,78□□□□□ -0,84
Cbx4-201ENSMUST00000026665 Krtap19-5O08632 62 aa9,7□□□□□ -0,86
Cbx4-201ENSMUST00000026665 Krtap3-1A2A591 98 aa9,66□□□□□ -0,86
Cbx4-201ENSMUST00000026665 Krtap13-1Q8K198 168 aa9,64□□□□□ -0,87
Cbx4-201ENSMUST00000026665 Xirp2Q4U4S6 3784 aa9,6□□□□□ -0,87
Cbx4-201ENSMUST00000026665 Gm10318A0A1W2P728 225 aa9,54□□□□□ -0,88
Cbx4-201ENSMUST00000026665 BsnO88737 3942 aa9,53□□□□□ -0,88
Cbx4-201ENSMUST00000026665 Huwe1Q7TMY8 4377 aaKnown RBP9,46□□□□□ -0,9
Cbx4-201ENSMUST00000026665 Gm19668J3QMD1 248 aa9,43□□□□□ -0,9
Cbx4-201ENSMUST00000026665 Dnah10D3YYQ8 4591 aa9,39□□□□□ -0,91
Cbx4-201ENSMUST00000026665 Hspg2Q05793 3707 aaKnown RBP9,38□□□□□ -0,91
Cbx4-201ENSMUST00000026665 Crct1Q6PAI5 102 aa9,32□□□□□ -0,92
Cbx4-201ENSMUST00000026665 Dnah17Q69Z23 4481 aa9,28□□□□□ -0,92
Cbx4-201ENSMUST00000026665 Csmd3Q80T79 3707 aa9,28□□□□□ -0,92
Cbx4-201ENSMUST00000026665 Dnah5Q8VHE6 4621 aa9,21□□□□□ -0,94
Cbx4-201ENSMUST00000026665 PlecQ9QXS1 4691 aaKnown RBP9,12□□□□□ -0,95
Cbx4-201ENSMUST00000026665 Vps13dB1ART2 4390 aa9,1□□□□□ -0,95
Cbx4-201ENSMUST00000026665 4933428G20RikQ9D3X4 101 aa9,09□□□□□ -0,95
Cbx4-201ENSMUST00000026665 Dnah7bL7N1Y0 4068 aa9,05□□□□□ -0,96
Cbx4-201ENSMUST00000026665 Stard9Q80TF6 4561 aa9,05□□□□□ -0,96
Cbx4-201ENSMUST00000026665 Dnah11E9Q7N9 4488 aa9,04□□□□□ -0,96
Cbx4-201ENSMUST00000026665 Krtap7-1Q9D3I6 87 aa9,01□□□□□ -0,97
Cbx4-201ENSMUST00000026665 Dnah9B1AR51 4484 aa8,96□□□□□ -0,97
Cbx4-201ENSMUST00000026665 Sprr2a3Q4KL71 83 aa8,92□□□□□ -0,98
Cbx4-201ENSMUST00000026665 Sprr2a1Q9CQK8 83 aa8,92□□□□□ -0,98
Cbx4-201ENSMUST00000026665 Krtap1-5A2A590 122 aa8,91□□□□□ -0,98
Cbx4-201ENSMUST00000026665 Dync2h1Q45VK7 4306 aa8,8□□□□□ -1
Cbx4-201ENSMUST00000026665 TnxbO35452 4006 aa8,79□□□□□ -1
Cbx4-201ENSMUST00000026665 Gm19402J3QJV4 266 aa8,7□□□□□ -1,02
Retrieved 100 of 22,080 RNA–protein pairs in 52,5 ms