RNA–Protein interactions for RNA: ENSMUST00000026665.7

Cbx4-201, Transcript of E3 SUMO-protein ligase CBX4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cbx4, Length 5,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4-201ENSMUST00000026665 Tenm3Q9WTS6 2715 aa11.85□□□□□ -0.51
Cbx4-201ENSMUST00000026665 Pla2g10Q9QXX3 151 aa11.84□□□□□ -0.51
Cbx4-201ENSMUST00000026665 LrbaQ9ESE1 2856 aa11.84□□□□□ -0.51
Cbx4-201ENSMUST00000026665 Krtap15-1Q9QZU5 150 aa11.79□□□□□ -0.52
Cbx4-201ENSMUST00000026665 Srrm2Q8BTI8 2703 aaKnown RBP11.77□□□□□ -0.53
Cbx4-201ENSMUST00000026665 Gm9507D3Z5T3 223 aa11.75□□□□□ -0.53
Cbx4-201ENSMUST00000026665 Krtap14O08640 167 aa11.75□□□□□ -0.53
Cbx4-201ENSMUST00000026665 Pdzd2E9Q1M1 2796 aa11.74□□□□□ -0.53
Cbx4-201ENSMUST00000026665 Zfhx3Q61329 3726 aa11.7□□□□□ -0.54
Cbx4-201ENSMUST00000026665 Rpl37Q9D823 97 aa11.68□□□□□ -0.54
Cbx4-201ENSMUST00000026665 Spink7Q6IE32 76 aa11.66□□□□□ -0.54
Cbx4-201ENSMUST00000026665 FcgbpE9Q0B5 2583 aa11.64□□□□□ -0.55
Cbx4-201ENSMUST00000026665 Romo1P60603 79 aa11.63□□□□□ -0.55
Cbx4-201ENSMUST00000026665 Helz2E9QAM5 2947 aaKnown RBP11.6□□□□□ -0.55
Cbx4-201ENSMUST00000026665 Gm5767A0A0J9YTU8 78 aa11.59□□□□□ -0.55
Cbx4-201ENSMUST00000026665 Krtap10-4Q08EG8 221 aa11.59□□□□□ -0.55
Cbx4-201ENSMUST00000026665 Csmd1Q923L3 3564 aa11.58□□□□□ -0.55
Cbx4-201ENSMUST00000026665 SpenQ62504 3644 aaKnown RBP11.57□□□□□ -0.56
Cbx4-201ENSMUST00000026665 Tnp2P11378 117 aa11.56□□□□□ -0.56
Cbx4-201ENSMUST00000026665 Tenm4Q3UHK6 2771 aa11.55□□□□□ -0.56
Cbx4-201ENSMUST00000026665 Muc5acE9QAQ8 3455 aa11.52□□□□□ -0.56
Cbx4-201ENSMUST00000026665 Gm10382Q3V0T5 144 aa11.52□□□□□ -0.57
Cbx4-201ENSMUST00000026665 Zfhx4Q9JJN2 3550 aa11.48□□□□□ -0.57
Cbx4-201ENSMUST00000026665 Smg1Q8BKX6 3658 aaKnown RBP11.48□□□□□ -0.57
Cbx4-201ENSMUST00000026665 Cox6b2Q80ZN9 88 aa11.43□□□□□ -0.58
Cbx4-201ENSMUST00000026665 D6Ertd527eA0A0N4SWI3 464 aa11.39□□□□□ -0.59
Cbx4-201ENSMUST00000026665 Krtap10-10A0A1W2P7T6 217 aa11.38□□□□□ -0.59
Cbx4-201ENSMUST00000026665 Lama5Q61001 3718 aa11.34□□□□□ -0.59
Cbx4-201ENSMUST00000026665 Rps29P62274 56 aa11.32□□□□□ -0.6
Cbx4-201ENSMUST00000026665 BC029722A0A0N4SW31 51 aa11.32□□□□□ -0.6
Cbx4-201ENSMUST00000026665 Camk2n1Q6QWF9 78 aa11.3□□□□□ -0.6
Cbx4-201ENSMUST00000026665 Gm884A2A9H6 3643 aa11.25□□□□□ -0.61
Cbx4-201ENSMUST00000026665 OtogO55225 2910 aa11.24□□□□□ -0.61
Cbx4-201ENSMUST00000026665 Fam229aB2KGE5 128 aa11.24□□□□□ -0.61
Cbx4-201ENSMUST00000026665 Gm19426M0QWC7 77 aa11.22□□□□□ -0.61
Cbx4-201ENSMUST00000026665 Sec61bQ9CQS8 96 aaKnown RBP11.2□□□□□ -0.62
Cbx4-201ENSMUST00000026665 Gm2696A0A1W2P709 240 aa11.11□□□□□ -0.63
Cbx4-201ENSMUST00000026665 Tenm1Q9WTS4 2731 aa10.94□□□□□ -0.66
Cbx4-201ENSMUST00000026665 Gm20537G3UYK7 97 aa10.92□□□□□ -0.66
Cbx4-201ENSMUST00000026665 Svep1A2AVA0 3567 aa10.91□□□□□ -0.66
Cbx4-201ENSMUST00000026665 Ndufaf8A2AMZ4 74 aa10.88□□□□□ -0.67
Cbx4-201ENSMUST00000026665 2310079G19RikQ9D6L6 185 aa10.84□□□□□ -0.67
Cbx4-201ENSMUST00000026665 Muc4Q8JZM8 3443 aa10.81□□□□□ -0.68
Cbx4-201ENSMUST00000026665 A930033H14RikG5E8X6 103 aa10.81□□□□□ -0.68
Cbx4-201ENSMUST00000026665 Fbn1Q61554 2873 aaKnown RBP10.79□□□□□ -0.68
Cbx4-201ENSMUST00000026665 Cmya5Q70KF4 3739 aa10.79□□□□□ -0.68
Cbx4-201ENSMUST00000026665 Gm5965D3Z724 196 aa10.78□□□□□ -0.68
Cbx4-201ENSMUST00000026665 Tenm2Q9WTS5 2764 aa10.65□□□□□ -0.7
Cbx4-201ENSMUST00000026665 VwfQ8CIZ8 2813 aa10.64□□□□□ -0.71
Cbx4-201ENSMUST00000026665 Gm21887J3QQ04 176 aa10.58□□□□□ -0.72
Cbx4-201ENSMUST00000026665 Gm40193A0A1B0GT39 78 aa10.47□□□□□ -0.73
Cbx4-201ENSMUST00000026665 Gm9112A2AI92 75 aa10.46□□□□□ -0.74
Cbx4-201ENSMUST00000026665 2310057N15RikQ9D6T8 200 aa10.43□□□□□ -0.74
Cbx4-201ENSMUST00000026665 B930094E09RikQ8C4T2 136 aa10.43□□□□□ -0.74
Cbx4-201ENSMUST00000026665 Megf8P60882 2789 aa10.39□□□□□ -0.75
Cbx4-201ENSMUST00000026665 Col7a1Q63870 2944 aa10.38□□□□□ -0.75
Cbx4-201ENSMUST00000026665 Ank2Q8C8R3 3898 aa10.35□□□□□ -0.75
Cbx4-201ENSMUST00000026665 Csmd2V9GX34 3611 aa10.34□□□□□ -0.75
Cbx4-201ENSMUST00000026665 Gm17416Q30KP4 66 aa10.28□□□□□ -0.76
Cbx4-201ENSMUST00000026665 Tnp1P10856 55 aa10.23□□□□□ -0.77
Cbx4-201ENSMUST00000026665 Gm9736A0A1W2P7N1 277 aa10.2□□□□□ -0.78
Cbx4-201ENSMUST00000026665 Muc6Q80T03 2850 aa10.16□□□□□ -0.78
Cbx4-201ENSMUST00000026665 Gm11939A2A592 99 aa10.14□□□□□ -0.79
Cbx4-201ENSMUST00000026665 2210017I01RikA0A0A6YVV1 95 aa10.13□□□□□ -0.79
Cbx4-201ENSMUST00000026665 Gm9918Q8BUR5 174 aa10.07□□□□□ -0.8
Cbx4-201ENSMUST00000026665 Krtap3-2Q9D638 99 aa10.03□□□□□ -0.8
Cbx4-201ENSMUST00000026665 Krtap3-3Q9D7P0 99 aa10.03□□□□□ -0.8
Cbx4-201ENSMUST00000026665 CubnQ9JLB4 3623 aa9.97□□□□□ -0.81
Cbx4-201ENSMUST00000026665 Prm2P07978 107 aa9.92□□□□□ -0.82
Cbx4-201ENSMUST00000026665 Gm17402F6Z0L5 76 aa9.91□□□□□ -0.82
Cbx4-201ENSMUST00000026665 LystP97412 3788 aa9.9□□□□□ -0.82
Cbx4-201ENSMUST00000026665 Dnah14A0A140LIJ4 4489 aa9.78□□□□□ -0.84
Cbx4-201ENSMUST00000026665 Krtap19-5O08632 62 aa9.7□□□□□ -0.86
Cbx4-201ENSMUST00000026665 Krtap3-1A2A591 98 aa9.66□□□□□ -0.86
Cbx4-201ENSMUST00000026665 Krtap13-1Q8K198 168 aa9.64□□□□□ -0.87
Cbx4-201ENSMUST00000026665 Xirp2Q4U4S6 3784 aa9.6□□□□□ -0.87
Cbx4-201ENSMUST00000026665 Gm10318A0A1W2P728 225 aa9.54□□□□□ -0.88
Cbx4-201ENSMUST00000026665 BsnO88737 3942 aa9.53□□□□□ -0.88
Cbx4-201ENSMUST00000026665 Huwe1Q7TMY8 4377 aaKnown RBP9.46□□□□□ -0.9
Cbx4-201ENSMUST00000026665 Gm19668J3QMD1 248 aa9.43□□□□□ -0.9
Cbx4-201ENSMUST00000026665 Dnah10D3YYQ8 4591 aa9.39□□□□□ -0.91
Cbx4-201ENSMUST00000026665 Hspg2Q05793 3707 aaKnown RBP9.38□□□□□ -0.91
Cbx4-201ENSMUST00000026665 Crct1Q6PAI5 102 aa9.32□□□□□ -0.92
Cbx4-201ENSMUST00000026665 Dnah17Q69Z23 4481 aa9.28□□□□□ -0.92
Cbx4-201ENSMUST00000026665 Csmd3Q80T79 3707 aa9.28□□□□□ -0.92
Cbx4-201ENSMUST00000026665 Dnah5Q8VHE6 4621 aa9.21□□□□□ -0.94
Cbx4-201ENSMUST00000026665 PlecQ9QXS1 4691 aaKnown RBP9.12□□□□□ -0.95
Cbx4-201ENSMUST00000026665 Vps13dB1ART2 4390 aa9.1□□□□□ -0.95
Cbx4-201ENSMUST00000026665 4933428G20RikQ9D3X4 101 aa9.09□□□□□ -0.95
Cbx4-201ENSMUST00000026665 Dnah7bL7N1Y0 4068 aa9.05□□□□□ -0.96
Cbx4-201ENSMUST00000026665 Stard9Q80TF6 4561 aa9.05□□□□□ -0.96
Cbx4-201ENSMUST00000026665 Dnah11E9Q7N9 4488 aa9.04□□□□□ -0.96
Cbx4-201ENSMUST00000026665 Krtap7-1Q9D3I6 87 aa9.01□□□□□ -0.97
Cbx4-201ENSMUST00000026665 Dnah9B1AR51 4484 aa8.96□□□□□ -0.97
Cbx4-201ENSMUST00000026665 Sprr2a3Q4KL71 83 aa8.92□□□□□ -0.98
Cbx4-201ENSMUST00000026665 Sprr2a1Q9CQK8 83 aa8.92□□□□□ -0.98
Cbx4-201ENSMUST00000026665 Krtap1-5A2A590 122 aa8.91□□□□□ -0.98
Cbx4-201ENSMUST00000026665 Dync2h1Q45VK7 4306 aa8.8□□□□□ -1
Cbx4-201ENSMUST00000026665 TnxbO35452 4006 aa8.79□□□□□ -1
Cbx4-201ENSMUST00000026665 Gm19402J3QJV4 266 aa8.7□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms