RNA–Protein interactions for RNA: ENSMUST00000005218.14

Cd44-201, Transcript of CD44 antigen, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Cd44, Length 5,614 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-201ENSMUST00000005218 Tex15F8VPN2 2785 aa3.96□□□□□ -1.78
Cd44-201ENSMUST00000005218 Col6a5A6H584 2640 aa3.95□□□□□ -1.78
Cd44-201ENSMUST00000005218 Igfn1Q3KNY0 2849 aa3.95□□□□□ -1.78
Cd44-201ENSMUST00000005218 FlncQ8VHX6 2726 aaKnown RBP3.94□□□□□ -1.78
Cd44-201ENSMUST00000005218 Celsr2Q9R0M0 2920 aa3.94□□□□□ -1.78
Cd44-201ENSMUST00000005218 Gm5767A0A0J9YTU8 78 aa3.93□□□□□ -1.78
Cd44-201ENSMUST00000005218 1700042G07RikB1AUF7 90 aa3.91□□□□□ -1.78
Cd44-201ENSMUST00000005218 Chd9Q8BYH8 2885 aa3.91□□□□□ -1.78
Cd44-201ENSMUST00000005218 ApcQ61315 2845 aa3.91□□□□□ -1.78
Cd44-201ENSMUST00000005218 Gm6217A0A1Y7VJK9 128 aa3.91□□□□□ -1.78
Cd44-201ENSMUST00000005218 Gm2696A0A1W2P709 240 aa3.9□□□□□ -1.78
Cd44-201ENSMUST00000005218 Smg1Q8BKX6 3658 aaKnown RBP3.9□□□□□ -1.79
Cd44-201ENSMUST00000005218 TgO08710 2766 aa3.89□□□□□ -1.79
Cd44-201ENSMUST00000005218 SpenQ62504 3644 aaKnown RBP3.89□□□□□ -1.79
Cd44-201ENSMUST00000005218 Rpl37Q9D823 97 aa3.89□□□□□ -1.79
Cd44-201ENSMUST00000005218 Gm20538F6Z9R1 75 aa3.88□□□□□ -1.79
Cd44-201ENSMUST00000005218 Tnp2P11378 117 aa3.88□□□□□ -1.79
Cd44-201ENSMUST00000005218 Romo1P60603 79 aa3.88□□□□□ -1.79
Cd44-201ENSMUST00000005218 LrbaQ9ESE1 2856 aa3.87□□□□□ -1.79
Cd44-201ENSMUST00000005218 Gm884A2A9H6 3643 aa3.86□□□□□ -1.79
Cd44-201ENSMUST00000005218 Tenm3Q9WTS6 2715 aa3.86□□□□□ -1.79
Cd44-201ENSMUST00000005218 Camk2n1Q6QWF9 78 aa3.86□□□□□ -1.79
Cd44-201ENSMUST00000005218 Fam229aB2KGE5 128 aa3.85□□□□□ -1.79
Cd44-201ENSMUST00000005218 Lama5Q61001 3718 aa3.85□□□□□ -1.79
Cd44-201ENSMUST00000005218 Srrm2Q8BTI8 2703 aaKnown RBP3.85□□□□□ -1.79
Cd44-201ENSMUST00000005218 Muc5acE9QAQ8 3455 aa3.85□□□□□ -1.79
Cd44-201ENSMUST00000005218 Gm10382Q3V0T5 144 aa3.84□□□□□ -1.79
Cd44-201ENSMUST00000005218 Nf1Q04690 2841 aa3.83□□□□□ -1.8
Cd44-201ENSMUST00000005218 Pdzd2E9Q1M1 2796 aa3.83□□□□□ -1.8
Cd44-201ENSMUST00000005218 Sec61bQ9CQS8 96 aaKnown RBP3.82□□□□□ -1.8
Cd44-201ENSMUST00000005218 Zfhx4Q9JJN2 3550 aa3.81□□□□□ -1.8
Cd44-201ENSMUST00000005218 BC029722A0A0N4SW31 51 aa3.81□□□□□ -1.8
Cd44-201ENSMUST00000005218 Tenm4Q3UHK6 2771 aa3.8□□□□□ -1.8
Cd44-201ENSMUST00000005218 D6Ertd527eA0A0N4SWI3 464 aa3.79□□□□□ -1.8
Cd44-201ENSMUST00000005218 Cox6b2Q80ZN9 88 aa3.79□□□□□ -1.8
Cd44-201ENSMUST00000005218 FcgbpE9Q0B5 2583 aa3.79□□□□□ -1.8
Cd44-201ENSMUST00000005218 Gm19426M0QWC7 77 aa3.78□□□□□ -1.8
Cd44-201ENSMUST00000005218 Helz2E9QAM5 2947 aaKnown RBP3.77□□□□□ -1.81
Cd44-201ENSMUST00000005218 Rps29P62274 56 aa3.77□□□□□ -1.81
Cd44-201ENSMUST00000005218 A0A1Y7VJH8 109 aa3.72□□□□□ -1.81
Cd44-201ENSMUST00000005218 Gm5965D3Z724 196 aa3.72□□□□□ -1.81
Cd44-201ENSMUST00000005218 Svep1A2AVA0 3567 aa3.72□□□□□ -1.81
Cd44-201ENSMUST00000005218 Cmya5Q70KF4 3739 aa3.71□□□□□ -1.82
Cd44-201ENSMUST00000005218 OtogO55225 2910 aa3.7□□□□□ -1.82
Cd44-201ENSMUST00000005218 2310057N15RikQ9D6T8 200 aa3.67□□□□□ -1.82
Cd44-201ENSMUST00000005218 Krtap28-10A0A1Y7VP58 119 aa3.67□□□□□ -1.82
Cd44-201ENSMUST00000005218 Gm20537G3UYK7 97 aa3.63□□□□□ -1.83
Cd44-201ENSMUST00000005218 Ndufaf8A2AMZ4 74 aa3.6□□□□□ -1.83
Cd44-201ENSMUST00000005218 Gm21887J3QQ04 176 aa3.59□□□□□ -1.83
Cd44-201ENSMUST00000005218 A030005K14RikA0A1Y7VNY1 122 aa3.59□□□□□ -1.83
Cd44-201ENSMUST00000005218 Gm9736A0A1W2P7N1 277 aa3.58□□□□□ -1.84
Cd44-201ENSMUST00000005218 2310079G19RikQ9D6L6 185 aa3.58□□□□□ -1.84
Cd44-201ENSMUST00000005218 Krtap28-13A0A087WQP5 138 aa3.57□□□□□ -1.84
Cd44-201ENSMUST00000005218 Tenm1Q9WTS4 2731 aa3.56□□□□□ -1.84
Cd44-201ENSMUST00000005218 Tenm2Q9WTS5 2764 aa3.56□□□□□ -1.84
Cd44-201ENSMUST00000005218 A930033H14RikG5E8X6 103 aa3.56□□□□□ -1.84
Cd44-201ENSMUST00000005218 Muc4Q8JZM8 3443 aa3.56□□□□□ -1.84
Cd44-201ENSMUST00000005218 Fbn1Q61554 2873 aaKnown RBP3.55□□□□□ -1.84
Cd44-201ENSMUST00000005218 Csmd2V9GX34 3611 aa3.55□□□□□ -1.84
Cd44-201ENSMUST00000005218 Ank2Q8C8R3 3898 aa3.54□□□□□ -1.84
Cd44-201ENSMUST00000005218 VwfQ8CIZ8 2813 aa3.5□□□□□ -1.85
Cd44-201ENSMUST00000005218 A0A1Y7VJ07 166 aa3.5□□□□□ -1.85
Cd44-201ENSMUST00000005218 B930094E09RikQ8C4T2 136 aa3.48□□□□□ -1.85
Cd44-201ENSMUST00000005218 Gm9918Q8BUR5 174 aa3.46□□□□□ -1.86
Cd44-201ENSMUST00000005218 Tnp1P10856 55 aa3.43□□□□□ -1.86
Cd44-201ENSMUST00000005218 Gm7544A0A1Y7VJ58 118 aa3.43□□□□□ -1.86
Cd44-201ENSMUST00000005218 Gm10318A0A1W2P728 225 aa3.42□□□□□ -1.86
Cd44-201ENSMUST00000005218 LystP97412 3788 aa3.41□□□□□ -1.86
Cd44-201ENSMUST00000005218 Gm40193A0A1B0GT39 78 aa3.41□□□□□ -1.86
Cd44-201ENSMUST00000005218 Gm9112A2AI92 75 aa3.41□□□□□ -1.86
Cd44-201ENSMUST00000005218 Gm17416Q30KP4 66 aa3.4□□□□□ -1.87
Cd44-201ENSMUST00000005218 Col7a1Q63870 2944 aa3.39□□□□□ -1.87
Cd44-201ENSMUST00000005218 A030005L19RikA0A1Y7VIU2 113 aa3.38□□□□□ -1.87
Cd44-201ENSMUST00000005218 Gm11939A2A592 99 aa3.38□□□□□ -1.87
Cd44-201ENSMUST00000005218 Megf8P60882 2789 aa3.37□□□□□ -1.87
Cd44-201ENSMUST00000005218 2210017I01RikA0A0A6YVV1 95 aa3.36□□□□□ -1.87
Cd44-201ENSMUST00000005218 Dnah14A0A140LIJ4 4489 aa3.35□□□□□ -1.87
Cd44-201ENSMUST00000005218 CubnQ9JLB4 3623 aa3.34□□□□□ -1.87
Cd44-201ENSMUST00000005218 Krtap19-5O08632 62 aa3.33□□□□□ -1.88
Cd44-201ENSMUST00000005218 Crct1Q6PAI5 102 aa3.31□□□□□ -1.88
Cd44-201ENSMUST00000005218 Krtap3-2Q9D638 99 aa3.3□□□□□ -1.88
Cd44-201ENSMUST00000005218 Krtap3-3Q9D7P0 99 aa3.3□□□□□ -1.88
Cd44-201ENSMUST00000005218 Huwe1Q7TMY8 4377 aaKnown RBP3.29□□□□□ -1.88
Cd44-201ENSMUST00000005218 Xirp2Q4U4S6 3784 aa3.29□□□□□ -1.88
Cd44-201ENSMUST00000005218 BsnO88737 3942 aa3.27□□□□□ -1.89
Cd44-201ENSMUST00000005218 Muc6Q80T03 2850 aa3.27□□□□□ -1.89
Cd44-201ENSMUST00000005218 Krtap13-1Q8K198 168 aa3.26□□□□□ -1.89
Cd44-201ENSMUST00000005218 Hspg2Q05793 3707 aaKnown RBP3.26□□□□□ -1.89
Cd44-201ENSMUST00000005218 Prm2P07978 107 aa3.25□□□□□ -1.89
Cd44-201ENSMUST00000005218 Gm17402F6Z0L5 76 aa3.24□□□□□ -1.89
Cd44-201ENSMUST00000005218 Dnah10D3YYQ8 4591 aa3.24□□□□□ -1.89
Cd44-201ENSMUST00000005218 Csmd3Q80T79 3707 aa3.23□□□□□ -1.89
Cd44-201ENSMUST00000005218 Krtap3-1A2A591 98 aa3.23□□□□□ -1.89
Cd44-201ENSMUST00000005218 Gm19668J3QMD1 248 aa3.19□□□□□ -1.9
Cd44-201ENSMUST00000005218 A030014E15RikA0A1Y7VJV2 120 aa3.17□□□□□ -1.9
Cd44-201ENSMUST00000005218 Dnah5Q8VHE6 4621 aa3.16□□□□□ -1.9
Cd44-201ENSMUST00000005218 Dnah17Q69Z23 4481 aa3.15□□□□□ -1.9
Cd44-201ENSMUST00000005218 Dnah11E9Q7N9 4488 aa3.12□□□□□ -1.91
Cd44-201ENSMUST00000005218 Dnah7bL7N1Y0 4068 aa3.1□□□□□ -1.91
Cd44-201ENSMUST00000005218 PlecQ9QXS1 4691 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms