RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 Ube2bP63147 152 aa14.05□□□□□ -0.16
Trim3-202ENSMUST00000106789 Nsd1O88491 2588 aaKnown RBP14.03□□□□□ -0.16
Trim3-202ENSMUST00000106789 Defa28D3Z1V9 94 aa14.03□□□□□ -0.16
Trim3-202ENSMUST00000106789 Coa6Q8BGD8 79 aa14.01□□□□□ -0.17
Trim3-202ENSMUST00000106789 1700018G05RikA0A1B0GSI2 66 aa14.01□□□□□ -0.17
Trim3-202ENSMUST00000106789 Sslp1Q3UN54 99 aa14□□□□□ -0.17
Trim3-202ENSMUST00000106789 Prol1E9PYQ4 312 aa13.99□□□□□ -0.17
Trim3-202ENSMUST00000106789 Dnah3Q8BW94 4083 aa13.99□□□□□ -0.17
Trim3-202ENSMUST00000106789 Dnah7bL7N1Y0 4068 aa13.94□□□□□ -0.18
Trim3-202ENSMUST00000106789 Gm7137J3QMW1 236 aa13.94□□□□□ -0.18
Trim3-202ENSMUST00000106789 HrnrQ8VHD8 2496 aa13.94□□□□□ -0.18
Trim3-202ENSMUST00000106789 Gm12353A2AGJ4 60 aa13.94□□□□□ -0.18
Trim3-202ENSMUST00000106789 VwfQ8CIZ8 2813 aa13.93□□□□□ -0.18
Trim3-202ENSMUST00000106789 Gm21886J3QJU9 214 aa13.93□□□□□ -0.18
Trim3-202ENSMUST00000106789 Wfdc13Q5DQQ6 81 aa13.93□□□□□ -0.18
Trim3-202ENSMUST00000106789 Gm37013Q8K491 104 aa13.92□□□□□ -0.18
Trim3-202ENSMUST00000106789 Spint4Q9D263 159 aa13.91□□□□□ -0.18
Trim3-202ENSMUST00000106789 TgO08710 2766 aa13.91□□□□□ -0.18
Trim3-202ENSMUST00000106789 H2al1bA0A087WP11 105 aa13.9□□□□□ -0.18
Trim3-202ENSMUST00000106789 Gm36176A0A1W2P8D5 158 aa13.9□□□□□ -0.18
Trim3-202ENSMUST00000106789 H2al1kJ3QP08 105 aa13.9□□□□□ -0.18
Trim3-202ENSMUST00000106789 H2al1eQ810S6 105 aa13.9□□□□□ -0.18
Trim3-202ENSMUST00000106789 H2al1mQ9DAD9 105 aa13.9□□□□□ -0.18
Trim3-202ENSMUST00000106789 U90926O08546 118 aa13.88□□□□□ -0.19
Trim3-202ENSMUST00000106789 Reg3aO09037 175 aa13.88□□□□□ -0.19
Trim3-202ENSMUST00000106789 Gm10197F6QEY5 67 aa13.87□□□□□ -0.19
Trim3-202ENSMUST00000106789 Cdc42se1Q8BHL7 80 aa13.87□□□□□ -0.19
Trim3-202ENSMUST00000106789 Csmd3Q80T79 3707 aa13.85□□□□□ -0.19
Trim3-202ENSMUST00000106789 Fam104aA2A6P4 185 aa13.83□□□□□ -0.2
Trim3-202ENSMUST00000106789 Dnah10D3YYQ8 4591 aa13.83□□□□□ -0.2
Trim3-202ENSMUST00000106789 Igkv3-10A0A0G2JGN0 119 aa13.82□□□□□ -0.2
Trim3-202ENSMUST00000106789 Coa5Q99M07 74 aa13.82□□□□□ -0.2
Trim3-202ENSMUST00000106789 Atox1O08997 68 aaKnown RBP13.82□□□□□ -0.2
Trim3-202ENSMUST00000106789 B9d2Q3UK10 175 aa13.81□□□□□ -0.2
Trim3-202ENSMUST00000106789 Fn1P11276 2477 aaKnown RBP13.79□□□□□ -0.2
Trim3-202ENSMUST00000106789 Gm28230A0A0A0MQ91 144 aa13.79□□□□□ -0.2
Trim3-202ENSMUST00000106789 A0A286YE49 62 aa13.78□□□□□ -0.2
Trim3-202ENSMUST00000106789 Odf3bQ5M8M2 238 aa13.78□□□□□ -0.2
Trim3-202ENSMUST00000106789 AI606181Q8C7B9 129 aa13.77□□□□□ -0.21
Trim3-202ENSMUST00000106789 Rpl37aP61514 92 aa13.77□□□□□ -0.21
Trim3-202ENSMUST00000106789 Bean1Q9EQG5 255 aa13.76□□□□□ -0.21
Trim3-202ENSMUST00000106789 1700074P13RikQ9D9G7 251 aa13.75□□□□□ -0.21
Trim3-202ENSMUST00000106789 Zcchc13Q9D548 170 aa13.74□□□□□ -0.21
Trim3-202ENSMUST00000106789 SycnQ8VCK7 134 aa13.73□□□□□ -0.21
Trim3-202ENSMUST00000106789 Dnah14A0A140LIJ4 4489 aa13.73□□□□□ -0.21
Trim3-202ENSMUST00000106789 Ube2aQ9Z255 152 aa13.71□□□□□ -0.22
Trim3-202ENSMUST00000106789 Dnah1E9Q8T7 4250 aa13.69□□□□□ -0.22
Trim3-202ENSMUST00000106789 Gm10139O88245 57 aa13.69□□□□□ -0.22
Trim3-202ENSMUST00000106789 Igkv3-7A0A0G2JE31 119 aa13.68□□□□□ -0.22
Trim3-202ENSMUST00000106789 9530053A07RikE9PVG8 2581 aa13.67□□□□□ -0.22
Trim3-202ENSMUST00000106789 Chchd10Q7TNL9 138 aa13.66□□□□□ -0.22
Trim3-202ENSMUST00000106789 Phf5aP83870 110 aaKnown RBP13.65□□□□□ -0.22
Trim3-202ENSMUST00000106789 Gm10837Q3UTT8 145 aa13.61□□□□□ -0.23
Trim3-202ENSMUST00000106789 Dnah17Q69Z23 4481 aa13.61□□□□□ -0.23
Trim3-202ENSMUST00000106789 Wfdc10Q3V2J9 124 aa13.6□□□□□ -0.23
Trim3-202ENSMUST00000106789 Dnah6E9Q0B6 4144 aa13.59□□□□□ -0.23
Trim3-202ENSMUST00000106789 Gm9508A0A1W2P7W0 230 aa13.59□□□□□ -0.23
Trim3-202ENSMUST00000106789 Wfdc17Q5SSJ1 76 aa13.59□□□□□ -0.23
Trim3-202ENSMUST00000106789 2310061N02RikQ9D6S9 174 aa13.57□□□□□ -0.24
Trim3-202ENSMUST00000106789 Megf8P60882 2789 aa13.55□□□□□ -0.24
Trim3-202ENSMUST00000106789 Gm10267M0QWD8 85 aa13.55□□□□□ -0.24
Trim3-202ENSMUST00000106789 FasnP19096 2504 aaKnown RBP13.54□□□□□ -0.24
Trim3-202ENSMUST00000106789 Chtf8P0CG14 533 aa13.54□□□□□ -0.24
Trim3-202ENSMUST00000106789 Stab2Q8R4U0 2559 aa13.52□□□□□ -0.25
Trim3-202ENSMUST00000106789 Gm2310J3QNJ2 377 aa13.49□□□□□ -0.25
Trim3-202ENSMUST00000106789 Igkv3-5A0A140T8M6 119 aa13.49□□□□□ -0.25
Trim3-202ENSMUST00000106789 Gm28374F6SG70 93 aa13.49□□□□□ -0.25
Trim3-202ENSMUST00000106789 Gm20604F8WIA3 75 aa13.49□□□□□ -0.25
Trim3-202ENSMUST00000106789 Muc6Q80T03 2850 aa13.48□□□□□ -0.25
Trim3-202ENSMUST00000106789 Phxr4P15974 95 aa13.47□□□□□ -0.25
Trim3-202ENSMUST00000106789 Defb9Q8R2I6 67 aa13.45□□□□□ -0.26
Trim3-202ENSMUST00000106789 Dnah11E9Q7N9 4488 aa13.44□□□□□ -0.26
Trim3-202ENSMUST00000106789 1700012A03RikQ9DAF1 130 aa13.42□□□□□ -0.26
Trim3-202ENSMUST00000106789 Defb38Q7TNV7 63 aa13.41□□□□□ -0.26
Trim3-202ENSMUST00000106789 4933415A04RikQ9D443 101 aa13.4□□□□□ -0.26
Trim3-202ENSMUST00000106789 6030445D17RikE9Q8F9 148 aa13.39□□□□□ -0.27
Trim3-202ENSMUST00000106789 Nupr2Q497P3 102 aa13.39□□□□□ -0.27
Trim3-202ENSMUST00000106789 Gm10642Q3TWM1 71 aa13.37□□□□□ -0.27
Trim3-202ENSMUST00000106789 Tenm2Q9WTS5 2764 aa13.37□□□□□ -0.27
Trim3-202ENSMUST00000106789 Gm27235Q3UW50 83 aa13.36□□□□□ -0.27
Trim3-202ENSMUST00000106789 Sox16Q62247 57 aa13.36□□□□□ -0.27
Trim3-202ENSMUST00000106789 Gm10160F6Y577 67 aa13.34□□□□□ -0.27
Trim3-202ENSMUST00000106789 Igsf10Q3V1M1 2594 aa13.33□□□□□ -0.27
Trim3-202ENSMUST00000106789 AW011738F6S7Q2 159 aa13.33□□□□□ -0.28
Trim3-202ENSMUST00000106789 Dnah9B1AR51 4484 aa13.32□□□□□ -0.28
Trim3-202ENSMUST00000106789 Plac8Q9JI48 112 aa13.28□□□□□ -0.28
Trim3-202ENSMUST00000106789 Pkd1l1Q8R526 2615 aa13.28□□□□□ -0.28
Trim3-202ENSMUST00000106789 Q8K1L6 76 aa13.27□□□□□ -0.28
Trim3-202ENSMUST00000106789 Igkv3-3A0A140T8Q0 119 aa13.27□□□□□ -0.29
Trim3-202ENSMUST00000106789 Defb10Q8R2I8 73 aa13.22□□□□□ -0.29
Trim3-202ENSMUST00000106789 Anapc11Q9CPX9 84 aa13.2□□□□□ -0.3
Trim3-202ENSMUST00000106789 Gm20661K7N787 53 aa13.18□□□□□ -0.3
Trim3-202ENSMUST00000106789 Spata3Q9D9T6 193 aa13.17□□□□□ -0.3
Trim3-202ENSMUST00000106789 Dync2h1Q45VK7 4306 aa13.16□□□□□ -0.3
Trim3-202ENSMUST00000106789 Gm17349F7BGH6 99 aa13.15□□□□□ -0.3
Trim3-202ENSMUST00000106789 Huwe1Q7TMY8 4377 aaKnown RBP13.15□□□□□ -0.3
Trim3-202ENSMUST00000106789 Gm10065F6TJM2 114 aa13.15□□□□□ -0.3
Trim3-202ENSMUST00000106789 SptssbQ925E8 76 aa13.14□□□□□ -0.31
Trim3-202ENSMUST00000106789 Adm2Q7TNK8 150 aa13.12□□□□□ -0.31
Trim3-202ENSMUST00000106789 Krtap29-1A2A5X4 342 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 79.5 ms