RNA–Protein interactions for RNA: ENSMUST00000038421.7

Lsm1-201, Transcript of U6 snRNA-associated Sm-like protein LSm1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lsm1, Length 2,663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1-201ENSMUST00000038421 Coa6Q8BGD8 79 aa10.75□□□□□ -0.69
Lsm1-201ENSMUST00000038421 Defa28D3Z1V9 94 aa10.74□□□□□ -0.69
Lsm1-201ENSMUST00000038421 Hivep1Q03172 2688 aa10.73□□□□□ -0.69
Lsm1-201ENSMUST00000038421 1700018G05RikA0A1B0GSI2 66 aa10.73□□□□□ -0.69
Lsm1-201ENSMUST00000038421 Nsd1O88491 2588 aaKnown RBP10.71□□□□□ -0.69
Lsm1-201ENSMUST00000038421 Prol1E9PYQ4 312 aa10.71□□□□□ -0.7
Lsm1-201ENSMUST00000038421 Sslp1Q3UN54 99 aa10.69□□□□□ -0.7
Lsm1-201ENSMUST00000038421 Csmd3Q80T79 3707 aa10.69□□□□□ -0.7
Lsm1-201ENSMUST00000038421 H2al1bA0A087WP11 105 aa10.68□□□□□ -0.7
Lsm1-201ENSMUST00000038421 H2al1kJ3QP08 105 aa10.68□□□□□ -0.7
Lsm1-201ENSMUST00000038421 H2al1eQ810S6 105 aa10.68□□□□□ -0.7
Lsm1-201ENSMUST00000038421 Gm37013Q8K491 104 aa10.68□□□□□ -0.7
Lsm1-201ENSMUST00000038421 Spint4Q9D263 159 aa10.68□□□□□ -0.7
Lsm1-201ENSMUST00000038421 H2al1mQ9DAD9 105 aa10.68□□□□□ -0.7
Lsm1-201ENSMUST00000038421 HrnrQ8VHD8 2496 aa10.67□□□□□ -0.7
Lsm1-201ENSMUST00000038421 Gm12353A2AGJ4 60 aa10.67□□□□□ -0.7
Lsm1-201ENSMUST00000038421 Gm21886J3QJU9 214 aa10.67□□□□□ -0.7
Lsm1-201ENSMUST00000038421 Wfdc13Q5DQQ6 81 aa10.66□□□□□ -0.7
Lsm1-201ENSMUST00000038421 Dnah3Q8BW94 4083 aa10.66□□□□□ -0.7
Lsm1-201ENSMUST00000038421 Gm7137J3QMW1 236 aa10.65□□□□□ -0.7
Lsm1-201ENSMUST00000038421 Cdc42se1Q8BHL7 80 aa10.65□□□□□ -0.7
Lsm1-201ENSMUST00000038421 Gm10197F6QEY5 67 aa10.64□□□□□ -0.71
Lsm1-201ENSMUST00000038421 Dnah7bL7N1Y0 4068 aa10.64□□□□□ -0.71
Lsm1-201ENSMUST00000038421 Reg3aO09037 175 aa10.63□□□□□ -0.71
Lsm1-201ENSMUST00000038421 U90926O08546 118 aa10.62□□□□□ -0.71
Lsm1-201ENSMUST00000038421 Gm36176A0A1W2P8D5 158 aa10.62□□□□□ -0.71
Lsm1-201ENSMUST00000038421 TgO08710 2766 aa10.62□□□□□ -0.71
Lsm1-201ENSMUST00000038421 VwfQ8CIZ8 2813 aa10.62□□□□□ -0.71
Lsm1-201ENSMUST00000038421 Coa5Q99M07 74 aa10.6□□□□□ -0.71
Lsm1-201ENSMUST00000038421 Igkv3-10A0A0G2JGN0 119 aa10.59□□□□□ -0.71
Lsm1-201ENSMUST00000038421 Fam104aA2A6P4 185 aa10.59□□□□□ -0.71
Lsm1-201ENSMUST00000038421 Atox1O08997 68 aaKnown RBP10.59□□□□□ -0.71
Lsm1-201ENSMUST00000038421 Bean1Q9EQG5 255 aa10.58□□□□□ -0.72
Lsm1-201ENSMUST00000038421 AI606181Q8C7B9 129 aa10.57□□□□□ -0.72
Lsm1-201ENSMUST00000038421 Gm28230A0A0A0MQ91 144 aa10.56□□□□□ -0.72
Lsm1-201ENSMUST00000038421 A0A286YE49 62 aa10.56□□□□□ -0.72
Lsm1-201ENSMUST00000038421 Odf3bQ5M8M2 238 aa10.56□□□□□ -0.72
Lsm1-201ENSMUST00000038421 Dnah10D3YYQ8 4591 aa10.56□□□□□ -0.72
Lsm1-201ENSMUST00000038421 B9d2Q3UK10 175 aa10.56□□□□□ -0.72
Lsm1-201ENSMUST00000038421 Rpl37aP61514 92 aa10.55□□□□□ -0.72
Lsm1-201ENSMUST00000038421 1700074P13RikQ9D9G7 251 aa10.54□□□□□ -0.72
Lsm1-201ENSMUST00000038421 Zcchc13Q9D548 170 aa10.53□□□□□ -0.72
Lsm1-201ENSMUST00000038421 Dnah14A0A140LIJ4 4489 aa10.51□□□□□ -0.73
Lsm1-201ENSMUST00000038421 Fn1P11276 2477 aaKnown RBP10.5□□□□□ -0.73
Lsm1-201ENSMUST00000038421 SycnQ8VCK7 134 aa10.5□□□□□ -0.73
Lsm1-201ENSMUST00000038421 Gm10139O88245 57 aa10.49□□□□□ -0.73
Lsm1-201ENSMUST00000038421 Ube2aQ9Z255 152 aa10.49□□□□□ -0.73
Lsm1-201ENSMUST00000038421 Igkv3-7A0A0G2JE31 119 aa10.48□□□□□ -0.73
Lsm1-201ENSMUST00000038421 Dnah1E9Q8T7 4250 aa10.47□□□□□ -0.73
Lsm1-201ENSMUST00000038421 Chchd10Q7TNL9 138 aa10.46□□□□□ -0.74
Lsm1-201ENSMUST00000038421 Phf5aP83870 110 aaKnown RBP10.44□□□□□ -0.74
Lsm1-201ENSMUST00000038421 Gm10837Q3UTT8 145 aa10.41□□□□□ -0.74
Lsm1-201ENSMUST00000038421 Wfdc10Q3V2J9 124 aa10.41□□□□□ -0.74
Lsm1-201ENSMUST00000038421 9530053A07RikE9PVG8 2581 aa10.4□□□□□ -0.74
Lsm1-201ENSMUST00000038421 Dnah17Q69Z23 4481 aa10.4□□□□□ -0.74
Lsm1-201ENSMUST00000038421 Gm9508A0A1W2P7W0 230 aa10.4□□□□□ -0.75
Lsm1-201ENSMUST00000038421 Gm10267M0QWD8 85 aa10.39□□□□□ -0.75
Lsm1-201ENSMUST00000038421 2310061N02RikQ9D6S9 174 aa10.39□□□□□ -0.75
Lsm1-201ENSMUST00000038421 Chtf8P0CG14 533 aa10.38□□□□□ -0.75
Lsm1-201ENSMUST00000038421 Gm28374F6SG70 93 aa10.38□□□□□ -0.75
Lsm1-201ENSMUST00000038421 Wfdc17Q5SSJ1 76 aa10.37□□□□□ -0.75
Lsm1-201ENSMUST00000038421 Gm2310J3QNJ2 377 aa10.35□□□□□ -0.75
Lsm1-201ENSMUST00000038421 Dnah6E9Q0B6 4144 aa10.35□□□□□ -0.75
Lsm1-201ENSMUST00000038421 FasnP19096 2504 aaKnown RBP10.35□□□□□ -0.75
Lsm1-201ENSMUST00000038421 Megf8P60882 2789 aa10.35□□□□□ -0.75
Lsm1-201ENSMUST00000038421 Phxr4P15974 95 aa10.34□□□□□ -0.75
Lsm1-201ENSMUST00000038421 Gm20604F8WIA3 75 aa10.32□□□□□ -0.76
Lsm1-201ENSMUST00000038421 Igkv3-5A0A140T8M6 119 aa10.31□□□□□ -0.76
Lsm1-201ENSMUST00000038421 4933415A04RikQ9D443 101 aa10.3□□□□□ -0.76
Lsm1-201ENSMUST00000038421 Defb9Q8R2I6 67 aa10.3□□□□□ -0.76
Lsm1-201ENSMUST00000038421 Dnah11E9Q7N9 4488 aa10.29□□□□□ -0.76
Lsm1-201ENSMUST00000038421 Defb38Q7TNV7 63 aa10.28□□□□□ -0.76
Lsm1-201ENSMUST00000038421 Stab2Q8R4U0 2559 aa10.28□□□□□ -0.76
Lsm1-201ENSMUST00000038421 Tenm2Q9WTS5 2764 aa10.27□□□□□ -0.77
Lsm1-201ENSMUST00000038421 Muc6Q80T03 2850 aa10.26□□□□□ -0.77
Lsm1-201ENSMUST00000038421 Sox16Q62247 57 aa10.26□□□□□ -0.77
Lsm1-201ENSMUST00000038421 6030445D17RikE9Q8F9 148 aa10.25□□□□□ -0.77
Lsm1-201ENSMUST00000038421 1700012A03RikQ9DAF1 130 aa10.25□□□□□ -0.77
Lsm1-201ENSMUST00000038421 Dnah9B1AR51 4484 aa10.24□□□□□ -0.77
Lsm1-201ENSMUST00000038421 Gm10160F6Y577 67 aa10.22□□□□□ -0.77
Lsm1-201ENSMUST00000038421 Gm10642Q3TWM1 71 aa10.22□□□□□ -0.77
Lsm1-201ENSMUST00000038421 Gm27235Q3UW50 83 aa10.22□□□□□ -0.77
Lsm1-201ENSMUST00000038421 Nupr2Q497P3 102 aa10.22□□□□□ -0.77
Lsm1-201ENSMUST00000038421 Igsf10Q3V1M1 2594 aa10.19□□□□□ -0.78
Lsm1-201ENSMUST00000038421 AW011738F6S7Q2 159 aa10.18□□□□□ -0.78
Lsm1-201ENSMUST00000038421 Igkv3-3A0A140T8Q0 119 aa10.17□□□□□ -0.78
Lsm1-201ENSMUST00000038421 Plac8Q9JI48 112 aa10.16□□□□□ -0.78
Lsm1-201ENSMUST00000038421 Q8K1L6 76 aa10.15□□□□□ -0.78
Lsm1-201ENSMUST00000038421 Pkd1l1Q8R526 2615 aa10.11□□□□□ -0.79
Lsm1-201ENSMUST00000038421 Gm20661K7N787 53 aa10.11□□□□□ -0.79
Lsm1-201ENSMUST00000038421 Anapc11Q9CPX9 84 aa10.1□□□□□ -0.79
Lsm1-201ENSMUST00000038421 Defb10Q8R2I8 73 aa10.08□□□□□ -0.8
Lsm1-201ENSMUST00000038421 SptssbQ925E8 76 aa10.08□□□□□ -0.8
Lsm1-201ENSMUST00000038421 Huwe1Q7TMY8 4377 aaKnown RBP10.06□□□□□ -0.8
Lsm1-201ENSMUST00000038421 Gm10065F6TJM2 114 aa10.05□□□□□ -0.8
Lsm1-201ENSMUST00000038421 Gm17349F7BGH6 99 aa10.04□□□□□ -0.8
Lsm1-201ENSMUST00000038421 Dync2h1Q45VK7 4306 aa10.04□□□□□ -0.8
Lsm1-201ENSMUST00000038421 Spata3Q9D9T6 193 aa10.03□□□□□ -0.8
Lsm1-201ENSMUST00000038421 Adm2Q7TNK8 150 aa10.02□□□□□ -0.8
Lsm1-201ENSMUST00000038421 Krtap29-1A2A5X4 342 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 91.3 ms