RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Gm37013Q8K491 104 aa8.05□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Zcchc13Q9D548 170 aa8.04□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Gm19935A0A1B0GSF9 52 aa8.04□□□□□ -1.12
Rnf4-201ENSMUST00000030992 C130032M10RikQ8C888 123 aa8.04□□□□□ -1.12
Rnf4-201ENSMUST00000030992 TgO08710 2766 aa8.03□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Gm10401E9Q3K6 71 aa8.03□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Fras1Q80T14 4010 aa8.03□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Dnah11E9Q7N9 4488 aa8.03□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Tenm2Q9WTS5 2764 aa8.03□□□□□ -1.12
Rnf4-201ENSMUST00000030992 Rps28P62858 69 aaKnown RBP8.02□□□□□ -1.13
Rnf4-201ENSMUST00000030992 B230307C23RikQ8BLB2 64 aa8.02□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Dnah9B1AR51 4484 aa8.02□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Igkv3-4A0A140T8Q4 119 aa8.02□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Ube2bP63147 152 aa8.02□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Mrpl34Q99N91 92 aa8.02□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Gm17349F7BGH6 99 aa8.01□□□□□ -1.13
Rnf4-201ENSMUST00000030992 SycnQ8VCK7 134 aa8.01□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Gm10837Q3UTT8 145 aa8□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Gm12353A2AGJ4 60 aa8□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Gm10139O88245 57 aa8□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Gm44790A0A0N4SV91 103 aa7.99□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Muc6Q80T03 2850 aa7.99□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Gm17521F6QAC8 156 aa7.98□□□□□ -1.13
Rnf4-201ENSMUST00000030992 BikO70337 150 aa7.98□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Defa27F2Z403 93 aa7.98□□□□□ -1.13
Rnf4-201ENSMUST00000030992 Igsf10Q3V1M1 2594 aa7.97□□□□□ -1.13
Rnf4-201ENSMUST00000030992 1700018G05RikA0A1B0GSI2 66 aa7.96□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Prr15lQ8JZM2 100 aa7.96□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Odf3bQ5M8M2 238 aa7.96□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Igkv8-19A0A0G2JFN8 121 aa7.95□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Gm4707V9GXN5 68 aa7.95□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Q8BT88 171 aa7.94□□□□□ -1.14
Rnf4-201ENSMUST00000030992 UqcrqQ9CQ69 82 aa7.94□□□□□ -1.14
Rnf4-201ENSMUST00000030992 PrkdcP97313 4128 aa7.94□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Phf5aP83870 110 aaKnown RBP7.93□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Defa28D3Z1V9 94 aa7.92□□□□□ -1.14
Rnf4-201ENSMUST00000030992 AI606181Q8C7B9 129 aa7.92□□□□□ -1.14
Rnf4-201ENSMUST00000030992 PlecQ9QXS1 4691 aaKnown RBP7.91□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Stab2Q8R4U0 2559 aa7.9□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Igkv3-10A0A0G2JGN0 119 aa7.9□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Wfdc10Q3V2J9 124 aa7.9□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Wfdc13Q5DQQ6 81 aa7.9□□□□□ -1.14
Rnf4-201ENSMUST00000030992 Chchd10Q7TNL9 138 aa7.9□□□□□ -1.15
Rnf4-201ENSMUST00000030992 Gm21886J3QJU9 214 aa7.89□□□□□ -1.15
Rnf4-201ENSMUST00000030992 Nupr2Q497P3 102 aa7.89□□□□□ -1.15
Rnf4-201ENSMUST00000030992 Samd13D3YUG0 102 aa7.88□□□□□ -1.15
Rnf4-201ENSMUST00000030992 Defb9Q8R2I6 67 aa7.88□□□□□ -1.15
Rnf4-201ENSMUST00000030992 SnurfQ9WU12 71 aa7.87□□□□□ -1.15
Rnf4-201ENSMUST00000030992 Gm28230A0A0A0MQ91 144 aa7.86□□□□□ -1.15
Rnf4-201ENSMUST00000030992 Spink8Q09TK9 105 aa7.86□□□□□ -1.15
Rnf4-201ENSMUST00000030992 6030445D17RikE9Q8F9 148 aa7.86□□□□□ -1.15
Rnf4-201ENSMUST00000030992 Gm10065F6TJM2 114 aa7.85□□□□□ -1.15
Rnf4-201ENSMUST00000030992 1700012A03RikQ9DAF1 130 aa7.85□□□□□ -1.15
Rnf4-201ENSMUST00000030992 Ube2aQ9Z255 152 aa7.85□□□□□ -1.15
Rnf4-201ENSMUST00000030992 Igkv3-7A0A0G2JE31 119 aa7.84□□□□□ -1.15
Rnf4-201ENSMUST00000030992 Gm10570F6VB42 170 aa7.84□□□□□ -1.15
Rnf4-201ENSMUST00000030992 Gm9918Q8BUR5 174 aa7.83□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Plac8Q9JI48 112 aa7.83□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Krtap29-1A2A5X4 342 aa7.82□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Serp1Q9Z1W5 66 aa7.82□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Smlr1J3QMJ4 66 aa7.82□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Gm27235Q3UW50 83 aa7.81□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Reg3aO09037 175 aa7.81□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Brk1Q91VR8 75 aa7.81□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Q8K1L6 76 aa7.81□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Gm9507D3Z5T3 223 aa7.8□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Pet100P0DJE0 76 aa7.79□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Coa6Q8BGD8 79 aa7.78□□□□□ -1.16
Rnf4-201ENSMUST00000030992 Gm20604F8WIA3 75 aa7.77□□□□□ -1.17
Rnf4-201ENSMUST00000030992 Spint4Q9D263 159 aa7.77□□□□□ -1.17
Rnf4-201ENSMUST00000030992 H2al1aQ5M8Q2 105 aa7.77□□□□□ -1.17
Rnf4-201ENSMUST00000030992 Gm2310J3QNJ2 377 aa7.76□□□□□ -1.17
Rnf4-201ENSMUST00000030992 Dnah7cA0A087WR13 4024 aa7.75□□□□□ -1.17
Rnf4-201ENSMUST00000030992 Igkv3-5A0A140T8M6 119 aa7.75□□□□□ -1.17
Rnf4-201ENSMUST00000030992 Gm10642Q3TWM1 71 aa7.75□□□□□ -1.17
Rnf4-201ENSMUST00000030992 HrnrQ8VHD8 2496 aa7.74□□□□□ -1.17
Rnf4-201ENSMUST00000030992 A0A286YE49 62 aa7.74□□□□□ -1.17
Rnf4-201ENSMUST00000030992 Rpl37aP61514 92 aa7.74□□□□□ -1.17
Rnf4-201ENSMUST00000030992 Pkd1l1Q8R526 2615 aa7.72□□□□□ -1.17
Rnf4-201ENSMUST00000030992 FasnP19096 2504 aaKnown RBP7.72□□□□□ -1.17
Rnf4-201ENSMUST00000030992 Dnah7aE9Q0T8 4024 aa7.71□□□□□ -1.17
Rnf4-201ENSMUST00000030992 NbdyA0A0N4SUI7 68 aa7.7□□□□□ -1.18
Rnf4-201ENSMUST00000030992 Atox1O08997 68 aaKnown RBP7.69□□□□□ -1.18
Rnf4-201ENSMUST00000030992 Dnah5Q8VHE6 4621 aa7.69□□□□□ -1.18
Rnf4-201ENSMUST00000030992 2310050C09RikG5E8Z3 280 aa7.67□□□□□ -1.18
Rnf4-201ENSMUST00000030992 A530084C06RikQ3UTW2 186 aa7.67□□□□□ -1.18
Rnf4-201ENSMUST00000030992 Dph3Q8K0W9 82 aa7.67□□□□□ -1.18
Rnf4-201ENSMUST00000030992 1700074P13RikQ9D9G7 251 aa7.66□□□□□ -1.18
Rnf4-201ENSMUST00000030992 Cdc42se1Q8BHL7 80 aa7.65□□□□□ -1.18
Rnf4-201ENSMUST00000030992 Cypt14J3QPF7 87 aa7.65□□□□□ -1.18
Rnf4-201ENSMUST00000030992 Tnp2P11378 117 aa7.65□□□□□ -1.18
Rnf4-201ENSMUST00000030992 Coa5Q99M07 74 aa7.65□□□□□ -1.18
Rnf4-201ENSMUST00000030992 Hectd4E9Q2E4 4418 aa7.65□□□□□ -1.19
Rnf4-201ENSMUST00000030992 Adm2Q7TNK8 150 aa7.65□□□□□ -1.19
Rnf4-201ENSMUST00000030992 Defb11Q8R2I7 77 aa7.65□□□□□ -1.19
Rnf4-201ENSMUST00000030992 Gpr15lA0A0B4J1N3 78 aa7.64□□□□□ -1.19
Rnf4-201ENSMUST00000030992 Defb12Q8K4N3 78 aa7.64□□□□□ -1.19
Rnf4-201ENSMUST00000030992 Znf706Q9D115 76 aaKnown RBP7.63□□□□□ -1.19
Rnf4-201ENSMUST00000030992 Vps13dB1ART2 4390 aa7.62□□□□□ -1.19
Rnf4-201ENSMUST00000030992 Gm28374F6SG70 93 aa7.61□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 87.1 ms