RNA–Protein interactions for RNA: ENSMUST00000169900.7

Scn9a-207, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 7,497 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-207ENSMUST00000169900 Col27a1Q5QNQ9 1845 aa3.59□□□□□ -1.83
Scn9a-207ENSMUST00000169900 Ankrd17Q99NH0 2603 aaKnown RBP3.59□□□□□ -1.83
Scn9a-207ENSMUST00000169900 Fam19a3Q7TPG6 132 aa3.59□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Sostdc1Q9CQN4 206 aa3.59□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Ifitm6A0A1B0GS75 124 aa3.58□□□□□ -1.84
Scn9a-207ENSMUST00000169900 1700011M02RikB1AX35 88 aa3.58□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Rtl10D3YWW5 146 aa3.58□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Nbeal1E9PYP2 2688 aa3.58□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Setd2E9Q5F9 2537 aa3.58□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Phxr5P08399 672 aa3.58□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Gm10197F6QEY5 67 aa3.58□□□□□ -1.84
Scn9a-207ENSMUST00000169900 HrnrQ8VHD8 2496 aa3.57□□□□□ -1.84
Scn9a-207ENSMUST00000169900 4930432M17RikQ3V0W9 174 aa3.57□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Q9DAB9 146 aa3.57□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Zfhx4Q9JJN2 3550 aa3.57□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Znf414Q9DCK4 299 aa3.57□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Map1aQ9QYR6 2776 aa3.57□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Gm10577Q3UDV9 132 aa3.57□□□□□ -1.84
Scn9a-207ENSMUST00000169900 CnfnQ6PCW6 111 aa3.57□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Ranbp2Q9ERU9 3053 aaKnown RBP3.56□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Odf3l2Q3TZ65 277 aa3.56□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Spink7Q6IE32 76 aa3.56□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Gm16223Q8CBM3 117 aa3.56□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Gm26661M0QWV4 156 aa3.56□□□□□ -1.84
Scn9a-207ENSMUST00000169900 OxtP35454 125 aa3.56□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Gm19935A0A1B0GSF9 52 aa3.56□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Gm3250E9Q1M3 230 aa3.56□□□□□ -1.84
Scn9a-207ENSMUST00000169900 B430305J03RikQ8BQQ8 176 aa3.56□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Gm9903Q8C9Y8 129 aa3.55□□□□□ -1.84
Scn9a-207ENSMUST00000169900 A930002H24RikQ8C8Y3 163 aa3.55□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Smim1P0C8K7 78 aa3.55□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Gm9195A0A140LHT4 2805 aa3.55□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Utp20Q5XG71 2788 aaKnown RBP3.54□□□□□ -1.84
Scn9a-207ENSMUST00000169900 SpegQ62407 3262 aa3.54□□□□□ -1.84
Scn9a-207ENSMUST00000169900 6430550D23RikE9Q1X6 194 aa3.54□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Zfand2aQ9JII7 171 aa3.54□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Sprr2jO70561 109 aa3.53□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Cdip1Q9DB75 208 aa3.53□□□□□ -1.84
Scn9a-207ENSMUST00000169900 CriptO70333 101 aa3.53□□□□□ -1.84
Scn9a-207ENSMUST00000169900 AI606181Q8C7B9 129 aa3.53□□□□□ -1.84
Scn9a-207ENSMUST00000169900 Q9DAA7 145 aa3.53□□□□□ -1.84
Scn9a-207ENSMUST00000169900 E130208F15RikQ3UPV3 143 aa3.53□□□□□ -1.84
Scn9a-207ENSMUST00000169900 FlnbQ80X90 2602 aaKnown RBP3.53□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Prrc2cQ3TLH4 2846 aaKnown RBP3.52□□□□□ -1.85
Scn9a-207ENSMUST00000169900 4930524J08RikQ9CUJ5 163 aa3.52□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gm10642Q3TWM1 71 aa3.52□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Hectd1Q69ZR2 2618 aaKnown RBP3.52□□□□□ -1.85
Scn9a-207ENSMUST00000169900 NbeaQ9EPN1 2936 aa3.52□□□□□ -1.85
Scn9a-207ENSMUST00000169900 FasnP19096 2504 aaKnown RBP3.52□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Reg3aO09037 175 aa3.52□□□□□ -1.85
Scn9a-207ENSMUST00000169900 BptfA2A654 3036 aaKnown RBP3.51□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gm5142Q8C5X9 133 aa3.51□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gm10135F6TEE5 83 aa3.51□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Spink13Q3UTS8 97 aa3.51□□□□□ -1.85
Scn9a-207ENSMUST00000169900 AW011738F6S7Q2 159 aa3.51□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Rpl37aP61514 92 aa3.51□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gm27235Q3UW50 83 aa3.51□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gm11627A6PWP4 55 aa3.5□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Ypel4Q65Z93 127 aa3.5□□□□□ -1.85
Scn9a-207ENSMUST00000169900 UqcrqQ9CQ69 82 aa3.5□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Itpr3P70227 2670 aa3.5□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Trank1Q8BV79 2999 aa3.5□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Muc2Q80Z19 2680 aa3.5□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gm17689B3GLJ4 109 aa3.5□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Spaca4Q80ZQ0 127 aa3.5□□□□□ -1.85
Scn9a-207ENSMUST00000169900 4930507D05RikQ8C9C9 103 aa3.5□□□□□ -1.85
Scn9a-207ENSMUST00000169900 CrygaP04345 174 aa3.49□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gm28230A0A0A0MQ91 144 aa3.49□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Cd164Q9R0L9 197 aa3.49□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Snhg11Q4G0K9 87 aa3.49□□□□□ -1.85
Scn9a-207ENSMUST00000169900 A530084C06RikQ3UTW2 186 aa3.48□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Myo15aQ9QZZ4 3511 aa3.48□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gpr15lA0A0B4J1N3 78 aa3.48□□□□□ -1.85
Scn9a-207ENSMUST00000169900 1700018G05RikA0A1B0GSI2 66 aa3.48□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gm10837Q3UTT8 145 aa3.48□□□□□ -1.85
Scn9a-207ENSMUST00000169900 AtrQ9JKK8 2635 aa3.48□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gm10845Q3UNY9 185 aa3.47□□□□□ -1.85
Scn9a-207ENSMUST00000169900 2310034G01RikA0A286YDL3 209 aa3.47□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Abca12E9Q876 2595 aa3.47□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gm10160F6Y577 67 aa3.47□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Gm10549Q3URY4 149 aa3.47□□□□□ -1.85
Scn9a-207ENSMUST00000169900 Phf5aP83870 110 aaKnown RBP3.47□□□□□ -1.85
Scn9a-207ENSMUST00000169900 4930518I15RikQ3V2W7 57 aa3.46□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Cdc42se1Q8BHL7 80 aa3.46□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Akap13E9Q394 2776 aa3.46□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Bahcc1Q3UHR0 2643 aa3.45□□□□□ -1.86
Scn9a-207ENSMUST00000169900 RelnQ60841 3461 aa3.45□□□□□ -1.86
Scn9a-207ENSMUST00000169900 SpenQ62504 3644 aaKnown RBP3.45□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Gm21886J3QJU9 214 aa3.45□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Crip3Q6Q6R3 243 aa3.44□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Psors1c2Q80ZC9 134 aa3.44□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Dmac1Q9CQ00 111 aa3.44□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Ash1lQ99MY8 2958 aa3.44□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Mrpl34Q99N91 92 aa3.43□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Stab1Q8R4Y4 2571 aa3.43□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Myo18bE9PV66 2605 aa3.42□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Dchs1E9PVD3 3291 aa3.42□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Nsd1O88491 2588 aaKnown RBP3.42□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Cep192E9Q4Y4 2514 aaKnown RBP3.42□□□□□ -1.86
Scn9a-207ENSMUST00000169900 Gm5617Q91VN2 117 aa3.42□□□□□ -1.86
Retrieved 100 of 22,080 RNA–protein pairs in 89.6 ms