RNA–Protein interactions for RNA: ENSMUST00000107473.2

Rara-202, Transcript of Retinoic acid receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Rara, Length 3,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rara-202ENSMUST00000107473 Cox7bP56393 80 aa11.1□□□□□ -0.63
Rara-202ENSMUST00000107473 B230307C23RikQ8BLB2 64 aa11.09□□□□□ -0.63
Rara-202ENSMUST00000107473 AY074887Q8R5F9 132 aa11.09□□□□□ -0.63
Rara-202ENSMUST00000107473 Cox7b2Q9D2H1 82 aa11.09□□□□□ -0.63
Rara-202ENSMUST00000107473 2310034G01RikA0A286YDL3 209 aa11.08□□□□□ -0.64
Rara-202ENSMUST00000107473 Ormdl1Q921I0 153 aa11.08□□□□□ -0.64
Rara-202ENSMUST00000107473 Tmem254aP0DN89 123 aa11.08□□□□□ -0.64
Rara-202ENSMUST00000107473 Tmem254bP0DN90 123 aa11.08□□□□□ -0.64
Rara-202ENSMUST00000107473 Tmem254cP0DN91 123 aa11.08□□□□□ -0.64
Rara-202ENSMUST00000107473 Ighv8-13A0A075B5Y0 101 aa11.07□□□□□ -0.64
Rara-202ENSMUST00000107473 Gm11213A0A1B0GR83 88 aa11.07□□□□□ -0.64
Rara-202ENSMUST00000107473 Cdk2ap2Q9CPY4 127 aa11.07□□□□□ -0.64
Rara-202ENSMUST00000107473 Fam19a3Q7TPG6 132 aa11.07□□□□□ -0.64
Rara-202ENSMUST00000107473 9530003J23RikQ8BM26 151 aa11.07□□□□□ -0.64
Rara-202ENSMUST00000107473 Znf414Q9DCK4 299 aa11.06□□□□□ -0.64
Rara-202ENSMUST00000107473 Ubl5Q9EPV8 73 aa11.06□□□□□ -0.64
Rara-202ENSMUST00000107473 Ighv10-3A0A075B5T6 119 aa11.05□□□□□ -0.64
Rara-202ENSMUST00000107473 SmcpP15265 143 aa11.04□□□□□ -0.64
Rara-202ENSMUST00000107473 Cmc4Q61908 68 aa11.04□□□□□ -0.64
Rara-202ENSMUST00000107473 Fam168bQ80XQ8 194 aa11.04□□□□□ -0.64
Rara-202ENSMUST00000107473 CnbpP53996 178 aaKnown RBP11.04□□□□□ -0.64
Rara-202ENSMUST00000107473 Klk9Q32M27 251 aa11.04□□□□□ -0.64
Rara-202ENSMUST00000107473 P01819 144 aa11.03□□□□□ -0.64
Rara-202ENSMUST00000107473 Muc6Q80T03 2850 aa11.03□□□□□ -0.64
Rara-202ENSMUST00000107473 Ighv2-9A0A075B5Q5 116 aa11.03□□□□□ -0.64
Rara-202ENSMUST00000107473 Sfta2E9PXB6 77 aa11.03□□□□□ -0.64
Rara-202ENSMUST00000107473 Dnah14A0A140LIJ4 4489 aa11.03□□□□□ -0.64
Rara-202ENSMUST00000107473 Ighv10-1A0A0B4J1J6 119 aa11.03□□□□□ -0.64
Rara-202ENSMUST00000107473 Igkv4-92A0A0B4J1I2 117 aa11.01□□□□□ -0.65
Rara-202ENSMUST00000107473 Gm17509Q9CZ61 145 aa11□□□□□ -0.65
Rara-202ENSMUST00000107473 E130114P18RikF6S0S7 154 aa11□□□□□ -0.65
Rara-202ENSMUST00000107473 BikO70337 150 aa11□□□□□ -0.65
Rara-202ENSMUST00000107473 Defa28D3Z1V9 94 aa10.99□□□□□ -0.65
Rara-202ENSMUST00000107473 FasnP19096 2504 aaKnown RBP10.99□□□□□ -0.65
Rara-202ENSMUST00000107473 9430015G10RikA2ASP7 199 aa10.99□□□□□ -0.65
Rara-202ENSMUST00000107473 Gm10770F7D043 238 aa10.98□□□□□ -0.65
Rara-202ENSMUST00000107473 Scgb1b2O35176 93 aa10.98□□□□□ -0.65
Rara-202ENSMUST00000107473 Tenm2Q9WTS5 2764 aa10.98□□□□□ -0.65
Rara-202ENSMUST00000107473 AplnQ9R0R4 77 aa10.98□□□□□ -0.65
Rara-202ENSMUST00000107473 Rbm3O89086 153 aaKnown RBP10.97□□□□□ -0.65
Rara-202ENSMUST00000107473 Phxr5P08399 672 aa10.97□□□□□ -0.65
Rara-202ENSMUST00000107473 Tcl1b3P56842 122 aa10.97□□□□□ -0.65
Rara-202ENSMUST00000107473 Defb40Q70KL2 73 aa10.97□□□□□ -0.65
Rara-202ENSMUST00000107473 Gm16485Q8C4B7 115 aa10.97□□□□□ -0.65
Rara-202ENSMUST00000107473 A730071L15RikQ8C4X0 137 aa10.96□□□□□ -0.65
Rara-202ENSMUST00000107473 Serp2Q6TAW2 65 aa10.96□□□□□ -0.66
Rara-202ENSMUST00000107473 A330070K13RikQ8CA53 115 aa10.96□□□□□ -0.66
Rara-202ENSMUST00000107473 Mrpl52Q9D0Y8 121 aa10.96□□□□□ -0.66
Rara-202ENSMUST00000107473 Igkv8-28A0A0G2JE47 121 aa10.95□□□□□ -0.66
Rara-202ENSMUST00000107473 Sprr4Q8CGN8 76 aa10.95□□□□□ -0.66
Rara-202ENSMUST00000107473 Csdc2Q91YQ3 154 aa10.95□□□□□ -0.66
Rara-202ENSMUST00000107473 Fam19a5Q91WE9 132 aa10.94□□□□□ -0.66
Rara-202ENSMUST00000107473 Igkv3-2A0A075B5P0 119 aa10.94□□□□□ -0.66
Rara-202ENSMUST00000107473 Kmt2aP55200 3966 aa10.93□□□□□ -0.66
Rara-202ENSMUST00000107473 A830005F24RikQ8BRT5 167 aa10.92□□□□□ -0.66
Rara-202ENSMUST00000107473 Trav14-1A0A0G2JF94 121 aa10.92□□□□□ -0.66
Rara-202ENSMUST00000107473 Ntn5Q3UQ22 452 aa10.92□□□□□ -0.66
Rara-202ENSMUST00000107473 Gm10308Q9CVR5 141 aa10.92□□□□□ -0.66
Rara-202ENSMUST00000107473 Igkv1-110A0A0B4J1I0 119 aa10.92□□□□□ -0.66
Rara-202ENSMUST00000107473 Inafm2A0A1L1STD6 152 aa10.92□□□□□ -0.66
Rara-202ENSMUST00000107473 Wfdc13Q5DQQ6 81 aa10.92□□□□□ -0.66
Rara-202ENSMUST00000107473 SnurfQ9WU12 71 aa10.91□□□□□ -0.66
Rara-202ENSMUST00000107473 Psors1c2Q80ZC9 134 aa10.9□□□□□ -0.67
Rara-202ENSMUST00000107473 Brk1Q91VR8 75 aa10.9□□□□□ -0.67
Rara-202ENSMUST00000107473 BC048502Q80Y74 154 aa10.89□□□□□ -0.67
Rara-202ENSMUST00000107473 Elof1P60003 83 aa10.89□□□□□ -0.67
Rara-202ENSMUST00000107473 Prr15lQ8JZM2 100 aa10.88□□□□□ -0.67
Rara-202ENSMUST00000107473 Defa27F2Z403 93 aa10.87□□□□□ -0.67
Rara-202ENSMUST00000107473 Pou2af1Q64693 256 aa10.87□□□□□ -0.67
Rara-202ENSMUST00000107473 Defb12Q8K4N3 78 aa10.87□□□□□ -0.67
Rara-202ENSMUST00000107473 Gm11011D3Z3L9 86 aa10.84□□□□□ -0.67
Rara-202ENSMUST00000107473 Gm20604F8WIA3 75 aa10.84□□□□□ -0.67
Rara-202ENSMUST00000107473 Tcl1b5P56845 121 aa10.83□□□□□ -0.68
Rara-202ENSMUST00000107473 Wfdc17Q5SSJ1 76 aa10.82□□□□□ -0.68
Rara-202ENSMUST00000107473 Vpreb2P13373 142 aa10.82□□□□□ -0.68
Rara-202ENSMUST00000107473 GhrhP16043 103 aa10.82□□□□□ -0.68
Rara-202ENSMUST00000107473 Gm5617Q91VN2 117 aa10.82□□□□□ -0.68
Rara-202ENSMUST00000107473 Dnah6E9Q0B6 4144 aa10.81□□□□□ -0.68
Rara-202ENSMUST00000107473 Ube2bP63147 152 aa10.81□□□□□ -0.68
Rara-202ENSMUST00000107473 P06320 134 aa10.79□□□□□ -0.68
Rara-202ENSMUST00000107473 Spink8Q09TK9 105 aa10.79□□□□□ -0.68
Rara-202ENSMUST00000107473 PscaP57096 123 aa10.79□□□□□ -0.68
Rara-202ENSMUST00000107473 6430550D23RikE9Q1X6 194 aa10.79□□□□□ -0.68
Rara-202ENSMUST00000107473 Dnah3Q8BW94 4083 aa10.78□□□□□ -0.68
Rara-202ENSMUST00000107473 C130032M10RikQ8C888 123 aa10.78□□□□□ -0.68
Rara-202ENSMUST00000107473 Igkv3-12A0A140T8P0 119 aa10.78□□□□□ -0.68
Rara-202ENSMUST00000107473 Gm17521F6QAC8 156 aa10.78□□□□□ -0.68
Rara-202ENSMUST00000107473 Gm44790A0A0N4SV91 103 aa10.77□□□□□ -0.69
Rara-202ENSMUST00000107473 Obox2E9PXV9 151 aa10.77□□□□□ -0.69
Rara-202ENSMUST00000107473 P84750 121 aa10.77□□□□□ -0.69
Rara-202ENSMUST00000107473 Gm37389A0A0A6YW05 95 aa10.75□□□□□ -0.69
Rara-202ENSMUST00000107473 Gm16181B0V2H2 73 aa10.75□□□□□ -0.69
Rara-202ENSMUST00000107473 1700018G05RikA0A1B0GSI2 66 aa10.75□□□□□ -0.69
Rara-202ENSMUST00000107473 Smlr1J3QMJ4 66 aa10.75□□□□□ -0.69
Rara-202ENSMUST00000107473 Cox6a2P43023 97 aa10.73□□□□□ -0.69
Rara-202ENSMUST00000107473 BaalcQ8VHV1 145 aa10.73□□□□□ -0.69
Rara-202ENSMUST00000107473 Ighv2-5A0A0A6YY69 116 aa10.71□□□□□ -0.69
Rara-202ENSMUST00000107473 Tmem258P61166 79 aa10.7□□□□□ -0.7
Rara-202ENSMUST00000107473 Vpreb1P13372 142 aa10.69□□□□□ -0.7
Rara-202ENSMUST00000107473 Vpreb3D3Z6J4 130 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 90.3 ms