RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 BatfO35284 125 aa9□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Trav3-4A0A075B654 114 aa9□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Gm5153P01627 120 aa9□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 4930524J08RikQ9CUJ5 163 aa9□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Znf414Q9DCK4 299 aa9□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Srrm2Q8BTI8 2703 aaKnown RBP8.99□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Igkv8-24A0A140T8P5 121 aa8.99□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Prh1P05142 261 aa8.99□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Tmem213Q08EA8 116 aa8.99□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 ApcQ61315 2845 aa8.98□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Trav13-1A0A075B644 110 aa8.97□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Defb10Q8R2I8 73 aa8.97□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Gm17509Q9CZ61 145 aa8.97□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 AplnQ9R0R4 77 aa8.97□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Dnah3Q8BW94 4083 aa8.97□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 PtprqP0C5E4 2300 aa8.97□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 CnbpP53996 178 aaKnown RBP8.97□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 TeppQ6IMH0 216 aa8.97□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Gm5142Q8C5X9 133 aa8.97□□□□□ -0.97
Pdlim5-208ENSMUST00000196220 Nsd1O88491 2588 aaKnown RBP8.96□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Igkv4-92A0A0B4J1I2 117 aa8.96□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 9430015G10RikA2ASP7 199 aa8.96□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Reg3bP35230 175 aa8.96□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Cox7b2Q9D2H1 82 aa8.96□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 AW011738F6S7Q2 159 aa8.95□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Defb29Q8BGW9 78 aa8.95□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Gm12057A0A087WR21 115 aa8.94□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Igkv8-16A0A0G2JDG9 121 aa8.94□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Gm10518F6UQQ9 182 aa8.94□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 5730596B20RikQ8BQ08 205 aa8.94□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Gm7138L7N2C3 230 aa8.94□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Gm10845Q3UNY9 185 aa8.94□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Gm3238W4VSP7 230 aa8.94□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Trav13-2A0A075B649 110 aa8.93□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Ube2d4D3YUH6 135 aa8.93□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Hbb-b2P02089 147 aa8.93□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 MifP34884 115 aaKnown RBP8.92□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Xcl1P47993 114 aa8.92□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Reg3dQ9QUS9 175 aa8.92□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Mrpl52Q9D0Y8 121 aa8.91□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Ighv13-2A0A0A6YWN3 119 aa8.91□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Igkv1-35A0A0G2JDE5 120 aa8.91□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Gm36176A0A1W2P8D5 158 aa8.9□□□□□ -0.98
Pdlim5-208ENSMUST00000196220 Ighv10-1A0A0B4J1J6 119 aa8.88□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 AY074887Q8R5F9 132 aa8.88□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Trav13n-2A0A0G2JF93 110 aa8.88□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Trav14-1A0A0G2JF94 121 aa8.88□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Gm10770F7D043 238 aa8.88□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Atp5eP56382 52 aa8.88□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Rpl39lQ9CQD0 51 aa8.88□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Notch1Q01705 2531 aa8.87□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Sprr4Q8CGN8 76 aa8.87□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Spata45Q9CVW4 97 aa8.87□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Col6a5A6H584 2640 aa8.87□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Gm9805F6YK59 57 aa8.86□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Ufsp1Q9CZP0 217 aa8.86□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Wfdc12Q9JHY3 85 aa8.86□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 1810062G17RikG3X8Y2 129 aa8.85□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Dnah17Q69Z23 4481 aa8.85□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Dnah6E9Q0B6 4144 aa8.85□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 A730009L09RikA0A1B0GS82 72 aa8.85□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Gm3618D3Z4P5 127 aa8.85□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Camk2n2Q78WH7 79 aa8.85□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Anapc13Q8R034 74 aa8.85□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Gm2916Q9D9B9 127 aa8.85□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Trav14d-3-dv8A0A075B619 120 aa8.84□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 BC048502Q80Y74 154 aa8.84□□□□□ -0.99
Pdlim5-208ENSMUST00000196220 Dnah10D3YYQ8 4591 aa8.83□□□□□ -1
Pdlim5-208ENSMUST00000196220 Gm17577J3QNF7 156 aa8.83□□□□□ -1
Pdlim5-208ENSMUST00000196220 Rpl18aP62717 176 aaKnown RBP8.83□□□□□ -1
Pdlim5-208ENSMUST00000196220 Ifitm6A0A1B0GS75 124 aa8.83□□□□□ -1
Pdlim5-208ENSMUST00000196220 Sslp1Q3UN54 99 aa8.83□□□□□ -1
Pdlim5-208ENSMUST00000196220 Dnah14A0A140LIJ4 4489 aa8.82□□□□□ -1
Pdlim5-208ENSMUST00000196220 Defa2P28309 93 aa8.82□□□□□ -1
Pdlim5-208ENSMUST00000196220 Cdk2ap2Q9CPY4 127 aa8.82□□□□□ -1
Pdlim5-208ENSMUST00000196220 Inafm2A0A1L1STD6 152 aa8.81□□□□□ -1
Pdlim5-208ENSMUST00000196220 MrapQ9D159 127 aa8.81□□□□□ -1
Pdlim5-208ENSMUST00000196220 Ighv10-3A0A075B5T6 119 aa8.8□□□□□ -1
Pdlim5-208ENSMUST00000196220 Gm16485Q8C4B7 115 aa8.8□□□□□ -1
Pdlim5-208ENSMUST00000196220 Klk12B2RVZ0 247 aa8.8□□□□□ -1
Pdlim5-208ENSMUST00000196220 B9d2Q3UK10 175 aa8.78□□□□□ -1
Pdlim5-208ENSMUST00000196220 2310034G01RikA0A286YDL3 209 aa8.77□□□□□ -1
Pdlim5-208ENSMUST00000196220 Gm11627A6PWP4 55 aa8.77□□□□□ -1
Pdlim5-208ENSMUST00000196220 Dnah1E9Q8T7 4250 aa8.77□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Igkv8-26A0A075B5N5 123 aa8.77□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Gm7276Q3TYW4 209 aa8.77□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 TnxbO35452 4006 aa8.76□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Gm10320E9PW43 113 aa8.76□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Gm7102J3QQ10 178 aa8.76□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Elof1P60003 83 aa8.76□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Sprr1aQ62266 144 aa8.75□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Igkv4-58A0A0G2JGI6 119 aa8.74□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Igkv2-109A0A075B5K6 120 aa8.74□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Gm7137J3QMW1 236 aa8.74□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Gm4707V9GXN5 68 aa8.74□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 A0A286YCN5 57 aa8.73□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Ntn5Q3UQ22 452 aa8.73□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Q9DAA7 145 aa8.73□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Msrb1Q9JLC3 116 aa8.73□□□□□ -1.01
Pdlim5-208ENSMUST00000196220 Igkv1-88A0A140T8N1 120 aa8.72□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 82.1 ms