RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Prr13Q9CQJ5 137 aa16.3■□□□□ 0.2
Ubp1-203ENSMUST00000116492 Igkv3-1A0A075B5P1 119 aa16.3■□□□□ 0.2
Ubp1-203ENSMUST00000116492 2010109I03RikQ9CQ11 111 aa16.3■□□□□ 0.2
Ubp1-203ENSMUST00000116492 Igkv8-24A0A140T8P5 121 aa16.29■□□□□ 0.2
Ubp1-203ENSMUST00000116492 Itpr2Q9Z329 2701 aa16.29■□□□□ 0.2
Ubp1-203ENSMUST00000116492 EnhoQ8K1D8 76 aa16.28■□□□□ 0.2
Ubp1-203ENSMUST00000116492 Tenm1Q9WTS4 2731 aa16.27■□□□□ 0.2
Ubp1-203ENSMUST00000116492 Gm11213A0A1B0GR83 88 aa16.27■□□□□ 0.19
Ubp1-203ENSMUST00000116492 Phxr5P08399 672 aa16.27■□□□□ 0.19
Ubp1-203ENSMUST00000116492 MifP34884 115 aaKnown RBP16.27■□□□□ 0.19
Ubp1-203ENSMUST00000116492 Cox7bP56393 80 aa16.26■□□□□ 0.19
Ubp1-203ENSMUST00000116492 Gm10518F6UQQ9 182 aa16.24■□□□□ 0.19
Ubp1-203ENSMUST00000116492 Igkv8-16A0A0G2JDG9 121 aa16.24■□□□□ 0.19
Ubp1-203ENSMUST00000116492 Gm10845Q3UNY9 185 aa16.24■□□□□ 0.19
Ubp1-203ENSMUST00000116492 Igkv8-34A0A0G2JDU0 121 aa16.22■□□□□ 0.19
Ubp1-203ENSMUST00000116492 1810062G17RikG3X8Y2 129 aa16.22■□□□□ 0.19
Ubp1-203ENSMUST00000116492 CnbpP53996 178 aaKnown RBP16.22■□□□□ 0.19
Ubp1-203ENSMUST00000116492 Snhg11Q4G0K9 87 aa16.22■□□□□ 0.19
Ubp1-203ENSMUST00000116492 Rpl39lQ9CQD0 51 aa16.22■□□□□ 0.19
Ubp1-203ENSMUST00000116492 Reg3dQ9QUS9 175 aa16.19■□□□□ 0.18
Ubp1-203ENSMUST00000116492 E130208F15RikQ3UPV3 143 aa16.18■□□□□ 0.18
Ubp1-203ENSMUST00000116492 Wfdc12Q9JHY3 85 aa16.18■□□□□ 0.18
Ubp1-203ENSMUST00000116492 PolqQ8CGS6 2544 aa16.17■□□□□ 0.18
Ubp1-203ENSMUST00000116492 Ifitm6A0A1B0GS75 124 aa16.16■□□□□ 0.18
Ubp1-203ENSMUST00000116492 Hbb-b2P02089 147 aa16.15■□□□□ 0.18
Ubp1-203ENSMUST00000116492 Ube2d4D3YUH6 135 aa16.15■□□□□ 0.18
Ubp1-203ENSMUST00000116492 Gm17509Q9CZ61 145 aa16.15■□□□□ 0.18
Ubp1-203ENSMUST00000116492 Notch2O35516 2470 aa16.14■□□□□ 0.17
Ubp1-203ENSMUST00000116492 Gm28539A0A087WSL9 92 aa16.13■□□□□ 0.17
Ubp1-203ENSMUST00000116492 Gm7102J3QQ10 178 aa16.12■□□□□ 0.17
Ubp1-203ENSMUST00000116492 Klk12B2RVZ0 247 aa16.11■□□□□ 0.17
Ubp1-203ENSMUST00000116492 Kmt2aP55200 3966 aa16.1■□□□□ 0.17
Ubp1-203ENSMUST00000116492 Ighv13-2A0A0A6YWN3 119 aa16.1■□□□□ 0.17
Ubp1-203ENSMUST00000116492 Igkv4-92A0A0B4J1I2 117 aa16.1■□□□□ 0.17
Ubp1-203ENSMUST00000116492 9430015G10RikA2ASP7 199 aa16.1■□□□□ 0.17
Ubp1-203ENSMUST00000116492 Gm9805F6YK59 57 aa16.1■□□□□ 0.17
Ubp1-203ENSMUST00000116492 Reg3bP35230 175 aa16.1■□□□□ 0.17
Ubp1-203ENSMUST00000116492 Cox7b2Q9D2H1 82 aa16.1■□□□□ 0.17
Ubp1-203ENSMUST00000116492 AY074887Q8R5F9 132 aa16.09■□□□□ 0.17
Ubp1-203ENSMUST00000116492 Mrpl52Q9D0Y8 121 aa16.09■□□□□ 0.17
Ubp1-203ENSMUST00000116492 Ighv10-1A0A0B4J1J6 119 aa16.08■□□□□ 0.16
Ubp1-203ENSMUST00000116492 AtrQ9JKK8 2635 aa16.08■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Rpl18aP62717 176 aaKnown RBP16.07■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Gm7138L7N2C3 230 aa16.06■□□□□ 0.16
Ubp1-203ENSMUST00000116492 BB014433Q8C5R5 389 aa16.06■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Gm3238W4VSP7 230 aa16.06■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Gm10770F7D043 238 aa16.06■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Gm10320E9PW43 113 aa16.05■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Igkv2-109A0A075B5K6 120 aa16.04■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Ighv10-3A0A075B5T6 119 aa16.04■□□□□ 0.16
Ubp1-203ENSMUST00000116492 4930519P11RikQ9CUJ8 166 aa16.04■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Gm16181B0V2H2 73 aa16.04■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Gm10735Q3US96 136 aa16.04■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Ufsp1Q9CZP0 217 aa16.04■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Gm5617Q91VN2 117 aa16.03■□□□□ 0.16
Ubp1-203ENSMUST00000116492 AplnQ9R0R4 77 aa16.03■□□□□ 0.16
Ubp1-203ENSMUST00000116492 Igkv4-58A0A0G2JGI6 119 aa16.02■□□□□ 0.16
Ubp1-203ENSMUST00000116492 A730009L09RikA0A1B0GS82 72 aa16.01■□□□□ 0.15
Ubp1-203ENSMUST00000116492 6430550D23RikE9Q1X6 194 aa16■□□□□ 0.15
Ubp1-203ENSMUST00000116492 Q9DAA7 145 aa16■□□□□ 0.15
Ubp1-203ENSMUST00000116492 Defa20Q45VN2 95 aa15.99■□□□□ 0.15
Ubp1-203ENSMUST00000116492 Ntn5Q3UQ22 452 aa15.98■□□□□ 0.15
Ubp1-203ENSMUST00000116492 Igkv8-26A0A075B5N5 123 aa15.97■□□□□ 0.15
Ubp1-203ENSMUST00000116492 Sprr4Q8CGN8 76 aa15.96■□□□□ 0.15
Ubp1-203ENSMUST00000116492 Stab1Q8R4Y4 2571 aa15.96■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Trav14-1A0A0G2JF94 121 aa15.95■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Scgb1b2O35176 93 aa15.95■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Camk2n2Q78WH7 79 aa15.95■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Gm17577J3QNF7 156 aa15.94■□□□□ 0.14
Ubp1-203ENSMUST00000116492 A0A286YCN5 57 aa15.94■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Inafm2A0A1L1STD6 152 aa15.93■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Igf1P05017 153 aa15.93■□□□□ 0.14
Ubp1-203ENSMUST00000116492 BC048502Q80Y74 154 aa15.93■□□□□ 0.14
Ubp1-203ENSMUST00000116492 2310034G01RikA0A286YDL3 209 aa15.92■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Smim20D3Z7Q2 69 aa15.92■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Dnah3Q8BW94 4083 aa15.92■□□□□ 0.14
Ubp1-203ENSMUST00000116492 E130218I03RikA0A0U1RNU5 63 aa15.92■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Msrb1Q9JLC3 116 aa15.92■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Fn1P11276 2477 aaKnown RBP15.91■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Defa2P28309 93 aa15.91■□□□□ 0.14
Ubp1-203ENSMUST00000116492 SmcpP15265 143 aa15.91■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Cdk2ap2Q9CPY4 127 aa15.91■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Igkv8-27A0A0G2JF28 120 aa15.9■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Igkv8-30A0A140T8M3 121 aa15.9■□□□□ 0.14
Ubp1-203ENSMUST00000116492 PkigO70139 76 aa15.9■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Defa1P11477 93 aa15.9■□□□□ 0.14
Ubp1-203ENSMUST00000116492 Ormdl1Q921I0 153 aa15.89■□□□□ 0.13
Ubp1-203ENSMUST00000116492 Igkv1-88A0A140T8N1 120 aa15.88■□□□□ 0.13
Ubp1-203ENSMUST00000116492 Srrm2Q8BTI8 2703 aaKnown RBP15.88■□□□□ 0.13
Ubp1-203ENSMUST00000116492 ApcQ61315 2845 aa15.88■□□□□ 0.13
Ubp1-203ENSMUST00000116492 9530053A07RikE9PVG8 2581 aa15.88■□□□□ 0.13
Ubp1-203ENSMUST00000116492 Gm36176A0A1W2P8D5 158 aa15.88■□□□□ 0.13
Ubp1-203ENSMUST00000116492 Tmem254aP0DN89 123 aa15.88■□□□□ 0.13
Ubp1-203ENSMUST00000116492 Tmem254bP0DN90 123 aa15.88■□□□□ 0.13
Ubp1-203ENSMUST00000116492 Tmem254cP0DN91 123 aa15.88■□□□□ 0.13
Ubp1-203ENSMUST00000116492 Hivep1Q03172 2688 aa15.87■□□□□ 0.13
Ubp1-203ENSMUST00000116492 Hist1h4aP62806 103 aaKnown RBP15.87■□□□□ 0.13
Ubp1-203ENSMUST00000116492 Wfdc17Q5SSJ1 76 aa15.87■□□□□ 0.13
Ubp1-203ENSMUST00000116492 Elof1P60003 83 aa15.86■□□□□ 0.13
Ubp1-203ENSMUST00000116492 9530003J23RikQ8BM26 151 aa15.86■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms