RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 Gm43218A0A0G2JGT0 114 aa5.81□□□□□ -1.48
Bdnf-202ENSMUST00000111042 BB014433Q8C5R5 389 aa5.81□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Igkv1-117A0A140T8M0 119 aa5.8□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Rpl28P41105 137 aaKnown RBP5.8□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Eif4ebp3Q80VV3 101 aa5.8□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Gm17577J3QNF7 156 aa5.8□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Gm10549Q3URY4 149 aa5.8□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Igkv1-122A0A140T8M9 119 aa5.8□□□□□ -1.48
Bdnf-202ENSMUST00000111042 TeppQ6IMH0 216 aa5.79□□□□□ -1.48
Bdnf-202ENSMUST00000111042 4930524J08RikQ9CUJ5 163 aa5.79□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Nsd1O88491 2588 aaKnown RBP5.79□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Ighv2-9-1A0A075B697 116 aa5.79□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Gm5142Q8C5X9 133 aa5.78□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Ubl5Q9EPV8 73 aa5.78□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Sfta2E9PXB6 77 aa5.78□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Gm20604F8WIA3 75 aa5.78□□□□□ -1.48
Bdnf-202ENSMUST00000111042 PkigO70139 76 aa5.78□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Tcl1b3P56842 122 aa5.78□□□□□ -1.48
Bdnf-202ENSMUST00000111042 Ighv8-11A0A075B5X4 119 aa5.77□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Gm9805F6YK59 57 aa5.77□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Svep1A2AVA0 3567 aa5.77□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Tenm3Q9WTS6 2715 aa5.76□□□□□ -1.49
Bdnf-202ENSMUST00000111042 9430015G10RikA2ASP7 199 aa5.76□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Igkv4-58A0A0G2JGI6 119 aa5.76□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Defa28D3Z1V9 94 aa5.76□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Ighv8-13A0A075B5Y0 101 aa5.76□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Atp5eP56382 52 aa5.75□□□□□ -1.49
Bdnf-202ENSMUST00000111042 4930535I16RikQ9CUI2 172 aa5.75□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Tmem213Q08EA8 116 aa5.75□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Klk9Q32M27 251 aa5.75□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Inafm2A0A1L1STD6 152 aa5.74□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Igf1P05017 153 aa5.74□□□□□ -1.49
Bdnf-202ENSMUST00000111042 A0A286YE02 88 aa5.74□□□□□ -1.49
Bdnf-202ENSMUST00000111042 4930556J24RikQ9D4U7 146 aa5.74□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Defa23Q5G866 93 aa5.74□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Gm5153P01627 120 aa5.73□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Ormdl1Q921I0 153 aa5.73□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Ube2d4D3YUH6 135 aa5.73□□□□□ -1.49
Bdnf-202ENSMUST00000111042 OtogO55225 2910 aa5.73□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Defb50Q6TU36 73 aa5.73□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Cox7bP56393 80 aa5.72□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Gm10845Q3UNY9 185 aa5.72□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Defa21Q8C1P2 93 aa5.72□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Ighv10-1A0A0B4J1J6 119 aa5.72□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Gm20726G3UX18 150 aa5.71□□□□□ -1.49
Bdnf-202ENSMUST00000111042 Tmem254aP0DN89 123 aa5.71□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Tmem254bP0DN90 123 aa5.71□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Tmem254cP0DN91 123 aa5.71□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Hivep1Q03172 2688 aa5.71□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Igkv8-26A0A075B5N5 123 aa5.71□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Ighv1-56A0A0A6YXG2 117 aa5.71□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Tcl1b5P56845 121 aa5.71□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Col6a5A6H584 2640 aa5.7□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Igkv4-92A0A0B4J1I2 117 aa5.7□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Gm10735Q3US96 136 aa5.7□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Fn1P11276 2477 aaKnown RBP5.7□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Gm2916Q9D9B9 127 aa5.7□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Rbm3O89086 153 aaKnown RBP5.69□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Ube2bP63147 152 aa5.69□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Psors1c2Q80ZC9 134 aa5.68□□□□□ -1.5
Bdnf-202ENSMUST00000111042 B230307C23RikQ8BLB2 64 aa5.68□□□□□ -1.5
Bdnf-202ENSMUST00000111042 EnhoQ8K1D8 76 aa5.68□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Ighv2-9A0A075B5Q5 116 aa5.68□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Krtap11-1E9Q2E9 183 aa5.68□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Snhg11Q4G0K9 87 aa5.68□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Gm17509Q9CZ61 145 aa5.68□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Trav14-1A0A0G2JF94 121 aa5.68□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Tmem243B2RVB9 118 aa5.68□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Krtap28-10A0A1Y7VP58 119 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Gm7138L7N2C3 230 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Gm3238W4VSP7 230 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Cmya5Q70KF4 3739 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Itpr2Q9Z329 2701 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Pdzd2E9Q1M1 2796 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 A730009L09RikA0A1B0GS82 72 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 9530003J23RikQ8BM26 151 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Defb10Q8R2I8 73 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Naa38Q9D2U5 125 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 ScxQ64124 207 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Gm16485Q8C4B7 115 aa5.67□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Tex15F8VPN2 2785 aa5.66□□□□□ -1.5
Bdnf-202ENSMUST00000111042 E130208F15RikQ3UPV3 143 aa5.66□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Fam19a1Q7TPG8 133 aa5.66□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Muc4Q8JZM8 3443 aa5.66□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Sprr1bQ62267 153 aa5.66□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Scgb1b2O35176 93 aa5.65□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Fam19a5Q91WE9 132 aa5.65□□□□□ -1.5
Bdnf-202ENSMUST00000111042 Nbeal2Q6ZQA0 2742 aa5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 Gm16181B0V2H2 73 aa5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 C530025M09RikF6RGA8 229 aa5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 Pde6gP09174 87 aa5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 FasnP19096 2504 aaKnown RBP5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 Gm37389A0A0A6YW05 95 aa5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 Smim20D3Z7Q2 69 aa5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 Obox2E9PXV9 151 aa5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 P01819 144 aa5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 A0A1Y7VLE6 161 aa5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 Samd13D3YUG0 102 aa5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 Cd164Q9R0L9 197 aa5.64□□□□□ -1.51
Bdnf-202ENSMUST00000111042 Defb37Q7TMD2 62 aa5.63□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms