RNA–Protein interactions for RNA: ENSMUST00000049074.12

Ptprf-201, Transcript of Receptor-type tyrosine-protein phosphatase F, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ptprf, Length 7,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptprf-201ENSMUST00000049074 Gm6899Q3USS0 134 aa12.34□□□□□ -0.43
Ptprf-201ENSMUST00000049074 AI606181Q8C7B9 129 aa12.34□□□□□ -0.43
Ptprf-201ENSMUST00000049074 Gm10322F7D7I4 111 aa12.32□□□□□ -0.44
Ptprf-201ENSMUST00000049074 NpwA0A1L1STR8 176 aa12.32□□□□□ -0.44
Ptprf-201ENSMUST00000049074 A730009L09RikA0A1B0GS82 72 aa12.31□□□□□ -0.44
Ptprf-201ENSMUST00000049074 Zfand2aQ9JII7 171 aa12.31□□□□□ -0.44
Ptprf-201ENSMUST00000049074 Q9DAA7 145 aa12.31□□□□□ -0.44
Ptprf-201ENSMUST00000049074 Gm28230A0A0A0MQ91 144 aa12.3□□□□□ -0.44
Ptprf-201ENSMUST00000049074 Gm5142Q8C5X9 133 aa12.3□□□□□ -0.44
Ptprf-201ENSMUST00000049074 Rtl10D3YWW5 146 aa12.29□□□□□ -0.44
Ptprf-201ENSMUST00000049074 Gm10577Q3UDV9 132 aa12.28□□□□□ -0.44
Ptprf-201ENSMUST00000049074 P01819 144 aa12.27□□□□□ -0.44
Ptprf-201ENSMUST00000049074 Gm16181B0V2H2 73 aa12.27□□□□□ -0.44
Ptprf-201ENSMUST00000049074 PpdpfQ9CR37 115 aa12.26□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Odf3l2Q3TZ65 277 aa12.26□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Gpr15lA0A0B4J1N3 78 aa12.26□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Spaca4Q80ZQ0 127 aa12.24□□□□□ -0.45
Ptprf-201ENSMUST00000049074 2310009B15RikA0A0A6YWI4 143 aa12.23□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Phf5aP83870 110 aaKnown RBP12.23□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Defb45Q3V490 66 aa12.23□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Sprr2jO70561 109 aa12.23□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Atp5eP56382 52 aa12.23□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Tmem213Q08EA8 116 aa12.23□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Cd164Q9R0L9 197 aa12.22□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Znf414Q9DCK4 299 aa12.22□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Krtap27-1E9PX37 202 aa12.21□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Defb37Q7TMD2 62 aa12.21□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Jbts17Q8CE72 3214 aa12.21□□□□□ -0.45
Ptprf-201ENSMUST00000049074 Defb50Q6TU36 73 aa12.21□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Gm9573F7C950 1606 aa12.21□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Unc79Q0KK59 2596 aa12.2□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Prol1E9PYQ4 312 aa12.2□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Gm3233E9Q2H5 230 aa12.2□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Abca12E9Q876 2595 aa12.19□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Reg3aO09037 175 aa12.19□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Gm5153P01627 120 aa12.18□□□□□ -0.46
Ptprf-201ENSMUST00000049074 4930432M17RikQ3V0W9 174 aa12.18□□□□□ -0.46
Ptprf-201ENSMUST00000049074 UtrnE9Q6R7 3430 aa12.18□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Hcfc1Q61191 2045 aaKnown RBP12.17□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Ighv2-5A0A0A6YY69 116 aa12.17□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Gm5617Q91VN2 117 aa12.17□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Gm10570F6VB42 170 aa12.16□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Q9DAB9 146 aa12.16□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Golgb1E9PVZ8 3238 aa12.16□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Rpl37aP61514 92 aa12.15□□□□□ -0.46
Ptprf-201ENSMUST00000049074 Smim1P0C8K7 78 aa12.14□□□□□ -0.47
Ptprf-201ENSMUST00000049074 1700018G05RikA0A1B0GSI2 66 aa12.14□□□□□ -0.47
Ptprf-201ENSMUST00000049074 Snhg11Q4G0K9 87 aa12.13□□□□□ -0.47
Ptprf-201ENSMUST00000049074 Usp24B1AY13 2617 aaKnown RBP12.12□□□□□ -0.47
Ptprf-201ENSMUST00000049074 UqcrqQ9CQ69 82 aa12.12□□□□□ -0.47
Ptprf-201ENSMUST00000049074 4930524J08RikQ9CUJ5 163 aa12.11□□□□□ -0.47
Ptprf-201ENSMUST00000049074 Gm10999F6Q4M4 69 aa12.1□□□□□ -0.47
Ptprf-201ENSMUST00000049074 Gm10837Q3UTT8 145 aa12.1□□□□□ -0.47
Ptprf-201ENSMUST00000049074 2310034G01RikA0A286YDL3 209 aa12.1□□□□□ -0.47
Ptprf-201ENSMUST00000049074 E130208F15RikQ3UPV3 143 aa12.09□□□□□ -0.47
Ptprf-201ENSMUST00000049074 Fam19a3Q7TPG6 132 aa12.09□□□□□ -0.47
Ptprf-201ENSMUST00000049074 Ankrd17Q99NH0 2603 aaKnown RBP12.09□□□□□ -0.47
Ptprf-201ENSMUST00000049074 FlnbQ80X90 2602 aaKnown RBP12.08□□□□□ -0.48
Ptprf-201ENSMUST00000049074 BtcQ05928 177 aa12.07□□□□□ -0.48
Ptprf-201ENSMUST00000049074 Ankrd11E9Q4F7 2643 aa12.07□□□□□ -0.48
Ptprf-201ENSMUST00000049074 Igkv8-27A0A0G2JF28 120 aa12.06□□□□□ -0.48
Ptprf-201ENSMUST00000049074 Defb1P56386 69 aa12.06□□□□□ -0.48
Ptprf-201ENSMUST00000049074 Gm21886J3QJU9 214 aa12.05□□□□□ -0.48
Ptprf-201ENSMUST00000049074 Bean1Q9EQG5 255 aa12.05□□□□□ -0.48
Ptprf-201ENSMUST00000049074 Ep400Q8CHI8 3072 aaKnown RBP12.05□□□□□ -0.48
Ptprf-201ENSMUST00000049074 CnfnQ6PCW6 111 aa12.04□□□□□ -0.48
Ptprf-201ENSMUST00000049074 Gm10845Q3UNY9 185 aa12.03□□□□□ -0.48
Ptprf-201ENSMUST00000049074 Chchd10Q7TNL9 138 aa12.02□□□□□ -0.49
Ptprf-201ENSMUST00000049074 Myo18bE9PV66 2605 aa12□□□□□ -0.49
Ptprf-201ENSMUST00000049074 Cdip1Q9DB75 208 aa11.99□□□□□ -0.49
Ptprf-201ENSMUST00000049074 Pou2af1Q64693 256 aa11.98□□□□□ -0.49
Ptprf-201ENSMUST00000049074 Mrpl34Q99N91 92 aa11.98□□□□□ -0.49
Ptprf-201ENSMUST00000049074 Cox6a2P43023 97 aa11.97□□□□□ -0.49
Ptprf-201ENSMUST00000049074 FasnP19096 2504 aaKnown RBP11.97□□□□□ -0.49
Ptprf-201ENSMUST00000049074 Gm10549Q3URY4 149 aa11.97□□□□□ -0.49
Ptprf-201ENSMUST00000049074 Gm11627A6PWP4 55 aa11.97□□□□□ -0.49
Ptprf-201ENSMUST00000049074 OxtP35454 125 aa11.97□□□□□ -0.49
Ptprf-201ENSMUST00000049074 Sox16Q62247 57 aa11.97□□□□□ -0.49
Ptprf-201ENSMUST00000049074 B430305J03RikQ8BQQ8 176 aa11.96□□□□□ -0.5
Ptprf-201ENSMUST00000049074 A930002H24RikQ8C8Y3 163 aa11.94□□□□□ -0.5
Ptprf-201ENSMUST00000049074 Msrb1Q9JLC3 116 aa11.94□□□□□ -0.5
Ptprf-201ENSMUST00000049074 Fam168bQ80XQ8 194 aa11.94□□□□□ -0.5
Ptprf-201ENSMUST00000049074 AtrQ9JKK8 2635 aa11.94□□□□□ -0.5
Ptprf-201ENSMUST00000049074 Dmac1Q9CQ00 111 aa11.93□□□□□ -0.5
Ptprf-201ENSMUST00000049074 Znf580Q9DB38 172 aa11.93□□□□□ -0.5
Ptprf-201ENSMUST00000049074 AplnQ9R0R4 77 aa11.92□□□□□ -0.5
Ptprf-201ENSMUST00000049074 CenpwQ3URR0 86 aa11.91□□□□□ -0.5
Ptprf-201ENSMUST00000049074 Gm12216A0A1W2P827 62 aa11.91□□□□□ -0.5
Ptprf-201ENSMUST00000049074 Gm17689B3GLJ4 109 aa11.9□□□□□ -0.5
Ptprf-201ENSMUST00000049074 Dmbt1Q60997 2085 aa11.9□□□□□ -0.5
Ptprf-201ENSMUST00000049074 Zfp292Q9Z2U2 2698 aa11.9□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Prune2Q52KR3 3084 aa11.89□□□□□ -0.51
Ptprf-201ENSMUST00000049074 CrygaP04345 174 aa11.89□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Q8BGJ3 129 aa11.89□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Gm7137J3QMW1 236 aa11.88□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Gm43218A0A0G2JGT0 114 aa11.86□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Gm7138L7N2C3 230 aa11.86□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Gm3238W4VSP7 230 aa11.86□□□□□ -0.51
Ptprf-201ENSMUST00000049074 Ypel4Q65Z93 127 aa11.86□□□□□ -0.51
Ptprf-201ENSMUST00000049074 6430550D23RikE9Q1X6 194 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms