RNA–Protein interactions for RNA: ENSMUST00000048635.12

Shf-201, Transcript of SH2 domain-containing adapter protein F, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shf, Length 1,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shf-201ENSMUST00000048635 Smim1P0C8K7 78 aa17.09■□□□□ 0.33
Shf-201ENSMUST00000048635 Ufsp1Q9CZP0 217 aa17.09■□□□□ 0.33
Shf-201ENSMUST00000048635 Igkv8-16A0A0G2JDG9 121 aa17.08■□□□□ 0.32
Shf-201ENSMUST00000048635 Defa10P50708 93 aa17.08■□□□□ 0.32
Shf-201ENSMUST00000048635 Cops9Q3U898 57 aa17.08■□□□□ 0.32
Shf-201ENSMUST00000048635 Vamp8O70404 101 aa17.07■□□□□ 0.32
Shf-201ENSMUST00000048635 Triap1Q9D8Z2 76 aa17.07■□□□□ 0.32
Shf-201ENSMUST00000048635 Timm17bQ9Z0V7 172 aa17.07■□□□□ 0.32
Shf-201ENSMUST00000048635 Ryr3A2AGL3 4863 aa17.07■□□□□ 0.32
Shf-201ENSMUST00000048635 Trav4d-3A0A075B625 110 aa17.06■□□□□ 0.32
Shf-201ENSMUST00000048635 SycnQ8VCK7 134 aa17.06■□□□□ 0.32
Shf-201ENSMUST00000048635 Gm26727M0QWT1 121 aa17.04■□□□□ 0.32
Shf-201ENSMUST00000048635 Tal2Q62282 108 aa17.04■□□□□ 0.32
Shf-201ENSMUST00000048635 Gm10065F6TJM2 114 aa17.03■□□□□ 0.32
Shf-201ENSMUST00000048635 Ryr2E9Q401 4966 aaKnown RBP17.02■□□□□ 0.32
Shf-201ENSMUST00000048635 1700011M02RikB1AX35 88 aa17.02■□□□□ 0.31
Shf-201ENSMUST00000048635 Gm10577Q3UDV9 132 aa17.01■□□□□ 0.31
Shf-201ENSMUST00000048635 Cited1P97769 203 aa16.99■□□□□ 0.31
Shf-201ENSMUST00000048635 Pou2af1Q64693 256 aa16.99■□□□□ 0.31
Shf-201ENSMUST00000048635 A0A286YCN5 57 aa16.98■□□□□ 0.31
Shf-201ENSMUST00000048635 Tcl1b3P56842 122 aa16.98■□□□□ 0.31
Shf-201ENSMUST00000048635 Gm10518F6UQQ9 182 aa16.97■□□□□ 0.31
Shf-201ENSMUST00000048635 Defb45Q3V490 66 aa16.97■□□□□ 0.31
Shf-201ENSMUST00000048635 Pfn2Q9JJV2 140 aa16.97■□□□□ 0.31
Shf-201ENSMUST00000048635 Trav13-2A0A075B649 110 aa16.96■□□□□ 0.3
Shf-201ENSMUST00000048635 Wfdc12Q9JHY3 85 aa16.96■□□□□ 0.3
Shf-201ENSMUST00000048635 S100a8P27005 89 aa16.95■□□□□ 0.3
Shf-201ENSMUST00000048635 Reg3dQ9QUS9 175 aa16.95■□□□□ 0.3
Shf-201ENSMUST00000048635 C920008G01RikA0A0B4J1N1 112 aa16.94■□□□□ 0.3
Shf-201ENSMUST00000048635 Ube2d4D3YUH6 135 aa16.93■□□□□ 0.3
Shf-201ENSMUST00000048635 MifP34884 115 aaKnown RBP16.93■□□□□ 0.3
Shf-201ENSMUST00000048635 Rpl24Q8BP67 157 aaKnown RBP16.93■□□□□ 0.3
Shf-201ENSMUST00000048635 Glrp1E9Q9S8 174 aa16.9■□□□□ 0.3
Shf-201ENSMUST00000048635 Ccl17F6R5P4 103 aa16.9■□□□□ 0.3
Shf-201ENSMUST00000048635 Ntn5Q3UQ22 452 aa16.9■□□□□ 0.3
Shf-201ENSMUST00000048635 Gm6793B2RXM2 351 aa16.89■□□□□ 0.29
Shf-201ENSMUST00000048635 Wfdc6bF6ULY1 148 aa16.89■□□□□ 0.29
Shf-201ENSMUST00000048635 Zcchc13Q9D548 170 aa16.89■□□□□ 0.29
Shf-201ENSMUST00000048635 Sostdc1Q9CQN4 206 aa16.88■□□□□ 0.29
Shf-201ENSMUST00000048635 Krtap29-1A2A5X4 342 aa16.87■□□□□ 0.29
Shf-201ENSMUST00000048635 Lage3Q9CR70 148 aa16.87■□□□□ 0.29
Shf-201ENSMUST00000048635 Dnah5Q8VHE6 4621 aa16.87■□□□□ 0.29
Shf-201ENSMUST00000048635 Plscr4P58196 326 aa16.87■□□□□ 0.29
Shf-201ENSMUST00000048635 Znf414Q9DCK4 299 aa16.87■□□□□ 0.29
Shf-201ENSMUST00000048635 Gm2696A0A1W2P709 240 aa16.86■□□□□ 0.29
Shf-201ENSMUST00000048635 Prol1E9PYQ4 312 aa16.85■□□□□ 0.29
Shf-201ENSMUST00000048635 Obox2E9PXV9 151 aa16.84■□□□□ 0.29
Shf-201ENSMUST00000048635 Gm11020F6ZGD5 61 aa16.84■□□□□ 0.29
Shf-201ENSMUST00000048635 Cox7bP56393 80 aa16.83■□□□□ 0.28
Shf-201ENSMUST00000048635 Cdk2ap2Q9CPY4 127 aa16.82■□□□□ 0.28
Shf-201ENSMUST00000048635 Gemin7Q9CWY4 129 aa16.82■□□□□ 0.28
Shf-201ENSMUST00000048635 Wdr38Q9D994 303 aa16.82■□□□□ 0.28
Shf-201ENSMUST00000048635 Dync1h1Q9JHU4 4644 aaKnown RBP16.82■□□□□ 0.28
Shf-201ENSMUST00000048635 Gpr15lA0A0B4J1N3 78 aa16.8■□□□□ 0.28
Shf-201ENSMUST00000048635 Lst1O08843 95 aa16.79■□□□□ 0.28
Shf-201ENSMUST00000048635 Pglyrp4Q0VB07 374 aa16.79■□□□□ 0.28
Shf-201ENSMUST00000048635 Defa23Q5G866 93 aa16.79■□□□□ 0.28
Shf-201ENSMUST00000048635 Fam19a1Q7TPG8 133 aa16.79■□□□□ 0.28
Shf-201ENSMUST00000048635 4930415O20RikQ8CDT5 131 aa16.79■□□□□ 0.28
Shf-201ENSMUST00000048635 Csdc2Q91YQ3 154 aa16.79■□□□□ 0.28
Shf-201ENSMUST00000048635 Try10Q792Z1 246 aaKnown RBP16.78■□□□□ 0.28
Shf-201ENSMUST00000048635 Slamf6Q9ET39 351 aa16.78■□□□□ 0.28
Shf-201ENSMUST00000048635 Igkv8-18A0A0B4J1J3 123 aa16.77■□□□□ 0.27
Shf-201ENSMUST00000048635 MalO09198 153 aa16.76■□□□□ 0.27
Shf-201ENSMUST00000048635 Krtap13O88375 197 aa16.76■□□□□ 0.27
Shf-201ENSMUST00000048635 Ighv1-62-2A0A0A6YXZ4 119 aa16.75■□□□□ 0.27
Shf-201ENSMUST00000048635 1600014C23RikQ9DAX4 101 aa16.75■□□□□ 0.27
Shf-201ENSMUST00000048635 Smim13E9Q942 88 aa16.74■□□□□ 0.27
Shf-201ENSMUST00000048635 Fam168bQ80XQ8 194 aa16.74■□□□□ 0.27
Shf-201ENSMUST00000048635 Fam19a5Q91WE9 132 aa16.74■□□□□ 0.27
Shf-201ENSMUST00000048635 Fam104aA2A6P4 185 aa16.73■□□□□ 0.27
Shf-201ENSMUST00000048635 Defa27F2Z403 93 aa16.73■□□□□ 0.27
Shf-201ENSMUST00000048635 Ighv2-2A0A075B5P8 116 aa16.72■□□□□ 0.27
Shf-201ENSMUST00000048635 Ighv2-5A0A0A6YY69 116 aa16.72■□□□□ 0.27
Shf-201ENSMUST00000048635 BC107364E9Q5A2 140 aa16.72■□□□□ 0.27
Shf-201ENSMUST00000048635 P01821 116 aa16.72■□□□□ 0.27
Shf-201ENSMUST00000048635 Fat1A0A1L1SQU7 4645 aa16.72■□□□□ 0.27
Shf-201ENSMUST00000048635 Rpl28P41105 137 aaKnown RBP16.71■□□□□ 0.27
Shf-201ENSMUST00000048635 Gm10549Q3URY4 149 aa16.7■□□□□ 0.26
Shf-201ENSMUST00000048635 Stard9Q80TF6 4561 aa16.7■□□□□ 0.26
Shf-201ENSMUST00000048635 Rpl18aP62717 176 aaKnown RBP16.7■□□□□ 0.26
Shf-201ENSMUST00000048635 Vmn1r197Q8R265 298 aa16.7■□□□□ 0.26
Shf-201ENSMUST00000048635 Igkv1-88A0A140T8N1 120 aa16.69■□□□□ 0.26
Shf-201ENSMUST00000048635 Tac4Q99N14 128 aa16.69■□□□□ 0.26
Shf-201ENSMUST00000048635 Defa20Q45VN2 95 aa16.68■□□□□ 0.26
Shf-201ENSMUST00000048635 P01819 144 aa16.67■□□□□ 0.26
Shf-201ENSMUST00000048635 Gm10845Q3UNY9 185 aa16.67■□□□□ 0.26
Shf-201ENSMUST00000048635 Gm11027G8JL69 66 aa16.66■□□□□ 0.26
Shf-201ENSMUST00000048635 Gm5153P01627 120 aa16.66■□□□□ 0.26
Shf-201ENSMUST00000048635 BC048502Q80Y74 154 aa16.65■□□□□ 0.26
Shf-201ENSMUST00000048635 Defb9Q8R2I6 67 aa16.65■□□□□ 0.26
Shf-201ENSMUST00000048635 Dmac1Q9CQ00 111 aa16.64■□□□□ 0.25
Shf-201ENSMUST00000048635 Smr3aQ61900 147 aa16.63■□□□□ 0.25
Shf-201ENSMUST00000048635 Rab37Q9JKM7 223 aa16.63■□□□□ 0.25
Shf-201ENSMUST00000048635 P84750 121 aa16.62■□□□□ 0.25
Shf-201ENSMUST00000048635 Defa22Q8C1N8 93 aa16.62■□□□□ 0.25
Shf-201ENSMUST00000048635 Ociad2Q9D8W7 154 aa16.61■□□□□ 0.25
Shf-201ENSMUST00000048635 Mrpl52Q9D0Y8 121 aa16.6■□□□□ 0.25
Shf-201ENSMUST00000048635 Ly6hQ9WUC3 139 aa16.59■□□□□ 0.25
Shf-201ENSMUST00000048635 Igkv1-117A0A140T8M0 119 aa16.58■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms