RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Ighv1-11A0A0A6YWI9 117 aa6.87□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Mpv17l2Q8VIK2 200 aa6.87□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Lage3Q9CR70 148 aa6.87□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Lypd5Q9D7Z7 256 aa6.87□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 LeprotO89013 131 aa6.87□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Gm10735Q3US96 136 aa6.87□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Ighv8-12A0A0G2JDE1 119 aa6.86□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Prelid3aQ8VE85 172 aa6.86□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 CrygfQ9CXV3 174 aa6.86□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Trav4n-4A0A075B615 110 aa6.86□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Cox7a1P56392 80 aa6.85□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Ighv2-6-8A0A0A6YWY9 116 aa6.85□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Gm42674D3YUT9 64 aa6.85□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Eif4ebp1Q60876 117 aa6.85□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Gm3233E9Q2H5 230 aa6.85□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 A830031A19RikQ8BNT5 113 aa6.85□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Gm17472A0A075B683 117 aa6.84□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 H2al1kJ3QP08 105 aa6.84□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Ighv1-5A0A0A6YWG2 117 aa6.84□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Gm10295Q8CCF3 114 aa6.84□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 1700074P13RikQ9D9G7 251 aa6.84□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Gm44965A0A0N4SVR3 59 aa6.84□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Lect2O88803 151 aa6.84□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 Atp5g1Q9CR84 136 aa6.84□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 SnurfQ9WU12 71 aa6.84□□□□□ -1.31
Sh3rf1-202ENSMUST00000209611 C920008G01RikA0A0B4J1N1 112 aa6.83□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Tomm7Q9D173 55 aa6.83□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Ntn5Q3UQ22 452 aa6.83□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Igkv4-78A0A0A6YYE5 119 aa6.83□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Gm19935A0A1B0GSF9 52 aa6.83□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Lamtor3O88653 124 aa6.83□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Nf1Q04690 2841 aa6.83□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 CrygeQ03740 174 aa6.82□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 BC048502Q80Y74 154 aa6.82□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Tenm3Q9WTS6 2715 aa6.82□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Ube2d3P61079 147 aa6.82□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Ube2d2P62838 147 aa6.82□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 4930518I15RikQ3V2W7 57 aa6.82□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Vmo1Q5SXG7 201 aa6.82□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Cfap126Q6P8X9 189 aa6.82□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Spink13Q3UTS8 97 aa6.81□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Serp2Q6TAW2 65 aa6.81□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 4930415O20RikQ8CDT5 131 aa6.81□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Ighv8-5A0A0A6YY60 119 aa6.81□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Ubl5Q9EPV8 73 aa6.81□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Smim1P0C8K7 78 aa6.81□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 AtrQ9JKK8 2635 aa6.81□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Pfn2Q9JJV2 140 aa6.81□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Ppp1r32Q148A4 427 aa6.8□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Gm10322F7D7I4 111 aa6.8□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Spry2Q9QXV8 315 aa6.8□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 CicQ924A2 2510 aa6.8□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Spink4O35679 86 aa6.8□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Pla2g1bQ9Z0Y2 146 aa6.8□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 NipblQ6KCD5 2798 aaKnown RBP6.8□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 H2al1mQ9DAD9 105 aa6.79□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Pdzd2E9Q1M1 2796 aa6.79□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Dmbt1Q60997 2085 aa6.79□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Trav11A0A0B4J1J9 114 aa6.79□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Ighv13-2A0A0A6YWN3 119 aa6.79□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Sh2d1aO88890 126 aa6.79□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Gm10542F6XDR3 90 aa6.79□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Triap1Q9D8Z2 76 aa6.79□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Gm20730A0A075B5J6 119 aa6.78□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 SrarpQ3ULG3 163 aa6.78□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 4930442H23RikQ9D5G7 103 aa6.78□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Trav13d-1A0A075B606 110 aa6.78□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Ndufs5Q99LY9 106 aa6.78□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Igkv1-99F6XWB2 120 aa6.78□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Gm9747Q810H1 104 aa6.78□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Defb10Q8R2I8 73 aa6.78□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 3110070M22RikQ9DAQ7 118 aa6.78□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Hspg2Q05793 3707 aaKnown RBP6.78□□□□□ -1.32
Sh3rf1-202ENSMUST00000209611 Prp2P05143 317 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Rpl18aP62717 176 aaKnown RBP6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Defb29Q8BGW9 78 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Cd164Q9R0L9 197 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Inafm2A0A1L1STD6 152 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 P01745 121 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Ighv1-72P01751 139 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Ube2d1P61080 147 aaKnown RBP6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Rmi2Q3UPE3 149 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Gm9887F6RFI0 207 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Tmem254aP0DN89 123 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Tmem254bP0DN90 123 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Tmem254cP0DN91 123 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 PrcdQ00LT2 53 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Ighv1-59A0A0A6YXE0 117 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 E130114P18RikF6S0S7 154 aa6.77□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Higd2aQ9CQJ1 106 aa6.76□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Sslp1Q3UN54 99 aa6.76□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Chd9Q8BYH8 2885 aa6.76□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Shisa2Q8QZV2 295 aa6.76□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Igkv4-79A0A075B5L8 119 aa6.76□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 H2al1bA0A087WP11 105 aa6.75□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Cdc42se2Q8BGH7 84 aa6.75□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Dph3Q8K0W9 82 aa6.75□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Igkv4-72A0A0B4J1I4 117 aa6.75□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 Gpha2Q925Q5 128 aa6.75□□□□□ -1.33
Sh3rf1-202ENSMUST00000209611 D730001G18RikA0A087WQU7 115 aa6.75□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms