RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Gm10645Q3UPY1 145 aa5.3□□□□□ -1.56
Chm-202ENSMUST00000113388 Ufsp1Q9CZP0 217 aa5.3□□□□□ -1.56
Chm-202ENSMUST00000113388 Ifitm1Q9D103 106 aa5.3□□□□□ -1.56
Chm-202ENSMUST00000113388 Trav9-4A0A0B4J1K2 113 aa5.3□□□□□ -1.56
Chm-202ENSMUST00000113388 Klk9Q32M27 251 aa5.3□□□□□ -1.56
Chm-202ENSMUST00000113388 9930022D16RikQ8BG27 128 aa5.3□□□□□ -1.56
Chm-202ENSMUST00000113388 AI606181Q8C7B9 129 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Prr15lQ8JZM2 100 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 4930524J08RikQ9CUJ5 163 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 OtogO55225 2910 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Gm17660B9UIU9 90 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Ighv3-6P18531 116 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Igkv4-57-1A0A075B5M4 119 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Igkv14-100A0A0G2JG36 117 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Gm10401E9Q3K6 71 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Gm9970F6ZED4 185 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Obox2E9PXV9 151 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Gm3250E9Q1M3 230 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Lyzl4Q9D925 145 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Nf1Q04690 2841 aa5.29□□□□□ -1.56
Chm-202ENSMUST00000113388 Rnf5O35445 180 aa5.28□□□□□ -1.56
Chm-202ENSMUST00000113388 P01748 117 aa5.28□□□□□ -1.56
Chm-202ENSMUST00000113388 Igkv4-57A0A0A6YYE7 117 aa5.28□□□□□ -1.56
Chm-202ENSMUST00000113388 Igkv4-68A0A0B4J1I7 117 aa5.28□□□□□ -1.56
Chm-202ENSMUST00000113388 Ndufb1P0DN34 57 aa5.28□□□□□ -1.56
Chm-202ENSMUST00000113388 Gm10384Q3UQ87 92 aa5.28□□□□□ -1.56
Chm-202ENSMUST00000113388 Gm16223Q8CBM3 117 aa5.28□□□□□ -1.56
Chm-202ENSMUST00000113388 Znf575Q3TXZ1 239 aa5.28□□□□□ -1.56
Chm-202ENSMUST00000113388 Rpl39lQ9CQD0 51 aa5.28□□□□□ -1.56
Chm-202ENSMUST00000113388 Muc4Q8JZM8 3443 aa5.28□□□□□ -1.56
Chm-202ENSMUST00000113388 PolqQ8CGS6 2544 aa5.27□□□□□ -1.57
Chm-202ENSMUST00000113388 BC067074F6RXI4 2391 aa5.27□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm9513B3GLJ6 99 aa5.27□□□□□ -1.57
Chm-202ENSMUST00000113388 GfyJ3KML8 504 aa5.27□□□□□ -1.57
Chm-202ENSMUST00000113388 Ighv1-62-1A0A075B5U3 116 aa5.27□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm36368A0A1D5RLK8 91 aa5.27□□□□□ -1.57
Chm-202ENSMUST00000113388 Gp9O88186 177 aa5.27□□□□□ -1.57
Chm-202ENSMUST00000113388 Znf706Q9D115 76 aaKnown RBP5.27□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm20708H3BKF4 155 aa5.26□□□□□ -1.57
Chm-202ENSMUST00000113388 Hivep1Q03172 2688 aa5.26□□□□□ -1.57
Chm-202ENSMUST00000113388 Ighv1-11A0A0A6YWI9 117 aa5.26□□□□□ -1.57
Chm-202ENSMUST00000113388 FcorP0DJI6 106 aa5.26□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm15557A6PWY0 234 aa5.26□□□□□ -1.57
Chm-202ENSMUST00000113388 Fam19a3Q7TPG6 132 aa5.26□□□□□ -1.57
Chm-202ENSMUST00000113388 Cdc42se1Q8BHL7 80 aa5.26□□□□□ -1.57
Chm-202ENSMUST00000113388 A930002H24RikQ8C8Y3 163 aa5.26□□□□□ -1.57
Chm-202ENSMUST00000113388 Spink1P09036 80 aa5.25□□□□□ -1.57
Chm-202ENSMUST00000113388 Pde6gP09174 87 aa5.25□□□□□ -1.57
Chm-202ENSMUST00000113388 OdaphJ3QNT8 126 aa5.25□□□□□ -1.57
Chm-202ENSMUST00000113388 Chd9Q8BYH8 2885 aa5.25□□□□□ -1.57
Chm-202ENSMUST00000113388 Igkv20-101-2A0A0G2JDU3 113 aa5.25□□□□□ -1.57
Chm-202ENSMUST00000113388 Igkv3-10A0A0G2JGN0 119 aa5.25□□□□□ -1.57
Chm-202ENSMUST00000113388 Reg3aO09037 175 aa5.25□□□□□ -1.57
Chm-202ENSMUST00000113388 Nav3Q80TN7 2359 aa5.25□□□□□ -1.57
Chm-202ENSMUST00000113388 Ighv1-81A0A075B5Y4 117 aa5.25□□□□□ -1.57
Chm-202ENSMUST00000113388 Igkv4-54A0A0G2JES9 117 aa5.25□□□□□ -1.57
Chm-202ENSMUST00000113388 Prrc2cQ3TLH4 2846 aaKnown RBP5.24□□□□□ -1.57
Chm-202ENSMUST00000113388 Trav13-1A0A075B644 110 aa5.24□□□□□ -1.57
Chm-202ENSMUST00000113388 Rtl10D3YWW5 146 aa5.24□□□□□ -1.57
Chm-202ENSMUST00000113388 Prok1Q14A28 105 aa5.24□□□□□ -1.57
Chm-202ENSMUST00000113388 CnfnQ6PCW6 111 aa5.24□□□□□ -1.57
Chm-202ENSMUST00000113388 A830005F24RikQ8BRT5 167 aa5.24□□□□□ -1.57
Chm-202ENSMUST00000113388 Pdzd2E9Q1M1 2796 aa5.24□□□□□ -1.57
Chm-202ENSMUST00000113388 2310034G01RikA0A286YDL3 209 aa5.24□□□□□ -1.57
Chm-202ENSMUST00000113388 C530025M09RikF6RGA8 229 aa5.24□□□□□ -1.57
Chm-202ENSMUST00000113388 Ighv12-3A0A075B5T1 117 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Klk12B2RVZ0 247 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm10518F6UQQ9 182 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm37988J3QM41 62 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Sorl1O88307 2215 aaKnown RBP5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Znf239P24399 201 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Spink6Q8BT20 105 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 B230359F08RikA0A0B4J1K3 109 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Ighv1-72P01751 139 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 4930470P17RikQ9D542 155 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Igkv4-61A0A0G2JH00 117 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm17727E9Q4V7 109 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Coa6Q8BGD8 79 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm12689Q8BQU9 117 aa5.23□□□□□ -1.57
Chm-202ENSMUST00000113388 Igkv4-69A0A0B4J1I6 116 aa5.22□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm7075D3Z497 112 aa5.22□□□□□ -1.57
Chm-202ENSMUST00000113388 Igsf10Q3V1M1 2594 aa5.22□□□□□ -1.57
Chm-202ENSMUST00000113388 CnbpP53996 178 aaKnown RBP5.22□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm5941Q497P9 117 aa5.22□□□□□ -1.57
Chm-202ENSMUST00000113388 Arhgap32Q811P8 2089 aa5.22□□□□□ -1.57
Chm-202ENSMUST00000113388 Igkv4-72A0A0B4J1I4 117 aa5.22□□□□□ -1.57
Chm-202ENSMUST00000113388 Igkv4-59A0A0B4J1I8 117 aa5.22□□□□□ -1.57
Chm-202ENSMUST00000113388 Sostdc1Q9CQN4 206 aa5.22□□□□□ -1.57
Chm-202ENSMUST00000113388 Tenm3Q9WTS6 2715 aa5.22□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm9958Q8C9U4 106 aa5.22□□□□□ -1.57
Chm-202ENSMUST00000113388 Col6a5A6H584 2640 aa5.21□□□□□ -1.57
Chm-202ENSMUST00000113388 Igkv8-26A0A075B5N5 123 aa5.21□□□□□ -1.57
Chm-202ENSMUST00000113388 Igkv4-74A0A0B4J1I3 119 aa5.21□□□□□ -1.57
Chm-202ENSMUST00000113388 Gm20499D3Z4G5 72 aa5.21□□□□□ -1.58
Chm-202ENSMUST00000113388 P01738 130 aa5.21□□□□□ -1.58
Chm-202ENSMUST00000113388 Cox6b1P56391 86 aaKnown RBP5.21□□□□□ -1.58
Chm-202ENSMUST00000113388 Fhl1P97447 280 aaKnown RBP5.21□□□□□ -1.58
Chm-202ENSMUST00000113388 1700042G07RikB1AUF7 90 aa5.21□□□□□ -1.58
Chm-202ENSMUST00000113388 Reg3dQ9QUS9 175 aa5.2□□□□□ -1.58
Chm-202ENSMUST00000113388 P01643 108 aa5.2□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms