RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 P01823 113 aa11.67□□□□□ -0.54
Ubr3-201ENSMUST00000055758 SycnQ8VCK7 134 aa11.67□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Gm20538F6Z9R1 75 aa11.67□□□□□ -0.54
Ubr3-201ENSMUST00000055758 2310009B15RikA0A0A6YWI4 143 aa11.66□□□□□ -0.54
Ubr3-201ENSMUST00000055758 TshbP12656 138 aa11.66□□□□□ -0.54
Ubr3-201ENSMUST00000055758 P01755 137 aa11.66□□□□□ -0.54
Ubr3-201ENSMUST00000055758 E030018B13RikJ3QMS9 113 aa11.65□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Smim1P0C8K7 78 aa11.65□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Cox8cA6H666 72 aa11.65□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Ly6gP35461 111 aa11.65□□□□□ -0.54
Ubr3-201ENSMUST00000055758 Wfdc17Q5SSJ1 76 aa11.64□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Zfp462B1AWL2 2495 aaKnown RBP11.64□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Ighv2-9-1A0A075B697 116 aa11.64□□□□□ -0.55
Ubr3-201ENSMUST00000055758 CdsnQ7TPC1 561 aa11.64□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Col5a1O88207 1838 aa11.64□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Znf239P24399 201 aa11.64□□□□□ -0.55
Ubr3-201ENSMUST00000055758 RetnlbQ99P86 105 aa11.64□□□□□ -0.55
Ubr3-201ENSMUST00000055758 SnurfQ9WU12 71 aa11.64□□□□□ -0.55
Ubr3-201ENSMUST00000055758 AplnQ9R0R4 77 aa11.64□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Gm21748Q3UE70 102 aa11.62□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Ighv2-6-8A0A0A6YWY9 116 aa11.61□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Jbts17Q8CE72 3214 aa11.61□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Gm5153P01627 120 aa11.61□□□□□ -0.55
Ubr3-201ENSMUST00000055758 P01659 112 aa11.61□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Spint4Q9D263 159 aa11.61□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Ighv2-9A0A075B5Q5 116 aa11.6□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Gm4707V9GXN5 68 aa11.6□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Defb45Q3V490 66 aa11.6□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Sprr3O09116 238 aa11.59□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Cyyr1Q8VIH7 165 aa11.59□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Ighv1-5A0A0A6YWG2 117 aa11.58□□□□□ -0.55
Ubr3-201ENSMUST00000055758 Rpl28P41105 137 aaKnown RBP11.58□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Pla2g1bQ9Z0Y2 146 aa11.58□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Ly6c2P0CW03 131 aa11.57□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Q9CX25 107 aa11.57□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Spry4Q9WTP2 300 aa11.56□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Sptbn4E9PX29 2561 aa11.56□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Ighv2-3A0A075B696 115 aa11.55□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Cd164Q9R0L9 197 aa11.55□□□□□ -0.56
Ubr3-201ENSMUST00000055758 1700011M02RikB1AX35 88 aa11.55□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Hivep2Q3UHF7 2430 aa11.55□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Sostdc1Q9CQN4 206 aa11.55□□□□□ -0.56
Ubr3-201ENSMUST00000055758 NrgnP60761 78 aa11.55□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Ifitm6A0A1B0GS75 124 aa11.54□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Adm2Q7TNK8 150 aa11.54□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Nsun4C4P6S0 806 aaKnown RBP11.54□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Gm10577Q3UDV9 132 aa11.54□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Ighv1-66A0A075B5X5 117 aa11.53□□□□□ -0.56
Ubr3-201ENSMUST00000055758 SrarpQ3ULG3 163 aa11.52□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Gm26566Q8CAC1 153 aa11.52□□□□□ -0.56
Ubr3-201ENSMUST00000055758 Fgfbp3Q1HCM0 245 aa11.52□□□□□ -0.57
Ubr3-201ENSMUST00000055758 E130114P18RikF6S0S7 154 aa11.52□□□□□ -0.57
Ubr3-201ENSMUST00000055758 4930519P11RikQ9CUJ8 166 aa11.52□□□□□ -0.57
Ubr3-201ENSMUST00000055758 PrlhG3UWC3 86 aa11.52□□□□□ -0.57
Ubr3-201ENSMUST00000055758 UqcrqQ9CQ69 82 aa11.52□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Chchd10Q7TNL9 138 aa11.51□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Ptpn13Q64512 2453 aa11.5□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Sprr2jO70561 109 aa11.5□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Ntn5Q3UQ22 452 aa11.49□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Pla2g2eQ9QUL3 142 aa11.49□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Wisp2Q9Z0G4 251 aa11.49□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Col4a5Q63ZW6 1691 aa11.49□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Gm10490F6VBM2 120 aa11.48□□□□□ -0.57
Ubr3-201ENSMUST00000055758 FshbQ60687 130 aa11.48□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Col4a6B1AVK5 1691 aa11.48□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Prol1E9PYQ4 312 aa11.47□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Gm20661K7N787 53 aa11.47□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Fhl2O70433 279 aa11.47□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Gpha2Q925Q5 128 aa11.46□□□□□ -0.57
Ubr3-201ENSMUST00000055758 Kmt2bO08550 2713 aa11.46□□□□□ -0.58
Ubr3-201ENSMUST00000055758 SrcapA0A087WQ44 3271 aa11.46□□□□□ -0.58
Ubr3-201ENSMUST00000055758 4930432M17RikQ3V0W9 174 aa11.46□□□□□ -0.58
Ubr3-201ENSMUST00000055758 4930524J08RikQ9CUJ5 163 aa11.46□□□□□ -0.58
Ubr3-201ENSMUST00000055758 1600014C23RikQ9DAX4 101 aa11.46□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Zfyve26Q5DU37 2529 aa11.45□□□□□ -0.58
Ubr3-201ENSMUST00000055758 E130116L18RikQ8BMV6 101 aa11.45□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Ighv1-59A0A0A6YXE0 117 aa11.45□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Znf414Q9DCK4 299 aa11.45□□□□□ -0.58
Ubr3-201ENSMUST00000055758 P06329 120 aa11.44□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Polr2kQ63871 58 aa11.44□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Igkv8-27A0A0G2JF28 120 aa11.44□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Defb39Q70KL3 74 aa11.43□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Lmo4P61969 165 aa11.43□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Gm5142Q8C5X9 133 aa11.43□□□□□ -0.58
Ubr3-201ENSMUST00000055758 BC025920Q3US60 128 aa11.42□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Gm10322F7D7I4 111 aa11.41□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Pla2g2dQ9WVF6 144 aa11.41□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Gm10135F6TEE5 83 aa11.4□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Rnase13Q5GAM7 153 aa11.4□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Cdc42se2Q8BGH7 84 aa11.4□□□□□ -0.58
Ubr3-201ENSMUST00000055758 Notch2O35516 2470 aa11.39□□□□□ -0.59
Ubr3-201ENSMUST00000055758 Defb1P56386 69 aa11.38□□□□□ -0.59
Ubr3-201ENSMUST00000055758 Spink13Q3UTS8 97 aa11.38□□□□□ -0.59
Ubr3-201ENSMUST00000055758 4930556J24RikQ9D4U7 146 aa11.37□□□□□ -0.59
Ubr3-201ENSMUST00000055758 SbsponQ3UPR9 264 aa11.36□□□□□ -0.59
Ubr3-201ENSMUST00000055758 Defb50Q6TU36 73 aa11.36□□□□□ -0.59
Ubr3-201ENSMUST00000055758 Ttc28Q80XJ3 2450 aa11.34□□□□□ -0.59
Ubr3-201ENSMUST00000055758 Gm10999F6Q4M4 69 aa11.34□□□□□ -0.59
Ubr3-201ENSMUST00000055758 Chchd7Q8K2Q5 85 aa11.33□□□□□ -0.6
Ubr3-201ENSMUST00000055758 Gm10226O88253 85 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 64.4 ms