RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Cdc42se2Q8BGH7 84 aa13.35□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Chd9Q8BYH8 2885 aa13.34□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Klk12B2RVZ0 247 aa13.34□□□□□ -0.27
Ubp1-201ENSMUST00000009885 PrlhG3UWC3 86 aa13.34□□□□□ -0.27
Ubp1-201ENSMUST00000009885 MifP34884 115 aaKnown RBP13.34□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Cep192E9Q4Y4 2514 aaKnown RBP13.33□□□□□ -0.28
Ubp1-201ENSMUST00000009885 7530416G11RikJ3QJX6 159 aa13.32□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Ucn2Q99ML8 113 aa13.32□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Tmem254aP0DN89 123 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Tmem254bP0DN90 123 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Tmem254cP0DN91 123 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 SmcpP15265 143 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Rpl39lQ9CQD0 51 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Krtap26-1Q9D7N2 215 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Serp2Q6TAW2 65 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Rpl28P41105 137 aaKnown RBP13.3□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Myo18bE9PV66 2605 aa13.3□□□□□ -0.28
Ubp1-201ENSMUST00000009885 GhrhP16043 103 aa13.3□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Vmo1Q5SXG7 201 aa13.29□□□□□ -0.28
Ubp1-201ENSMUST00000009885 E130218I03RikA0A0U1RNU5 63 aa13.29□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Defa27F2Z403 93 aa13.29□□□□□ -0.28
Ubp1-201ENSMUST00000009885 EnhoQ8K1D8 76 aa13.29□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Lelp1Q9DAE3 120 aa13.29□□□□□ -0.28
Ubp1-201ENSMUST00000009885 GfyJ3KML8 504 aa13.28□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Tmem86bQ497J1 226 aa13.28□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Chd6A3KFM7 2711 aa13.28□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Plac8l1Q08EJ0 177 aa13.28□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Ubl5Q9EPV8 73 aa13.27□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Pla2g2cP48076 150 aa13.27□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Igkv1-99F6XWB2 120 aa13.27□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Klk11Q9QYN3 276 aa13.27□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Bri3P28662 125 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Gm10549Q3URY4 149 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Gm9925F6T2U3 160 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 2010109I03RikQ9CQ11 111 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 4930546C10RikE9Q4Y3 121 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Ppp1r32Q148A4 427 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 BikO70337 150 aa13.25□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Lamtor3O88653 124 aa13.24□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Fam19a1Q7TPG8 133 aa13.23□□□□□ -0.29
Ubp1-201ENSMUST00000009885 A830031A19RikQ8BNT5 113 aa13.23□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Zfp462B1AWL2 2495 aaKnown RBP13.22□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Igkv8-16A0A0G2JDG9 121 aa13.22□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Tmem258P61166 79 aa13.21□□□□□ -0.3
Ubp1-201ENSMUST00000009885 LrbaQ9ESE1 2856 aa13.2□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Gm5142Q8C5X9 133 aa13.2□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Utp20Q5XG71 2788 aaKnown RBP13.2□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Gm3443F7CCV5 94 aa13.2□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Tfpi2O35536 230 aa13.2□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Ormdl1Q921I0 153 aa13.18□□□□□ -0.3
Ubp1-201ENSMUST00000009885 FlncQ8VHX6 2726 aaKnown RBP13.18□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Q8R092 253 aa13.18□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Reg3dQ9QUS9 175 aa13.17□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Defb26Q30KN7 186 aa13.17□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Mrpl55Q9CZ83 127 aa13.16□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Gm10518F6UQQ9 182 aa13.16□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Pip4p1Q3TWL2 284 aa13.16□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Gm9913Q8BQQ2 135 aa13.16□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Fam19a5Q91WE9 132 aa13.15□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Tmem223Q9CQE2 199 aaKnown RBP13.15□□□□□ -0.3
Ubp1-201ENSMUST00000009885 CrygdP04342 174 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Gm10845Q3UNY9 185 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Trbv13-2A0A140T8N6 113 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Igkv8-24A0A140T8P5 121 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Cystm1Q8K353 104 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Defb42Q8BVB5 75 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Wfdc12Q9JHY3 85 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Igkv4-58A0A0G2JGI6 119 aa13.13□□□□□ -0.31
Ubp1-201ENSMUST00000009885 4930519P11RikQ9CUJ8 166 aa13.13□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Tm2d2Q8R0I4 213 aa13.12□□□□□ -0.31
Ubp1-201ENSMUST00000009885 SnurfQ9WU12 71 aa13.12□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Rnase1P00683 149 aa13.12□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Leap2Q91V13 76 aa13.12□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Zfand2aQ9JII7 171 aa13.12□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Nf1Q04690 2841 aa13.11□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Ifitm6A0A1B0GS75 124 aa13.11□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Gm19935A0A1B0GSF9 52 aa13.1□□□□□ -0.31
Ubp1-201ENSMUST00000009885 CrygaP04345 174 aa13.1□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Igkv8-18A0A0B4J1J3 123 aa13.1□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Itpr3P70227 2670 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Ighv1-56A0A0A6YXG2 117 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Epg5Q80TA9 2572 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Celsr2Q9R0M0 2920 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Inafm2A0A1L1STD6 152 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Rbm3O89086 153 aaKnown RBP13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Pet100P0DJE0 76 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 1810062G17RikG3X8Y2 129 aa13.07□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Defa28D3Z1V9 94 aa13.06□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Ube2d4D3YUH6 135 aa13.06□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Pla2g1bQ9Z0Y2 146 aa13.05□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Vpreb1P13372 142 aa13.05□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Rps28P62858 69 aaKnown RBP13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Mrpl52Q9D0Y8 121 aa13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Q9DAA7 145 aa13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Igkv4-61A0A0G2JH00 117 aa13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 PrcdQ00LT2 53 aa13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 TrrapQ80YV3 2565 aaKnown RBP13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Ighv13-2A0A0A6YWN3 119 aa13.03□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Gm8439G3UWA7 96 aa13.03□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Defb50Q6TU36 73 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 96.1 ms