RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Trav4-3A0A0B4J1K1 110 aa13.24□□□□□ -0.29
Trim47-202ENSMUST00000106441 Gm10735Q3US96 136 aa13.24□□□□□ -0.29
Trim47-202ENSMUST00000106441 B230217C12RikE9Q3Z1 139 aa13.23□□□□□ -0.29
Trim47-202ENSMUST00000106441 Ighv1-72P01751 139 aa13.23□□□□□ -0.29
Trim47-202ENSMUST00000106441 Trav4d-3A0A075B625 110 aa13.22□□□□□ -0.29
Trim47-202ENSMUST00000106441 Tex15F8VPN2 2785 aa13.22□□□□□ -0.29
Trim47-202ENSMUST00000106441 NipblQ6KCD5 2798 aaKnown RBP13.22□□□□□ -0.29
Trim47-202ENSMUST00000106441 Wdr38Q9D994 303 aa13.22□□□□□ -0.29
Trim47-202ENSMUST00000106441 Wfdc17Q5SSJ1 76 aa13.21□□□□□ -0.29
Trim47-202ENSMUST00000106441 Eif4ebp1Q60876 117 aa13.21□□□□□ -0.29
Trim47-202ENSMUST00000106441 Mzt1Q8BUR9 78 aa13.21□□□□□ -0.29
Trim47-202ENSMUST00000106441 Timm17bQ9Z0V7 172 aa13.21□□□□□ -0.29
Trim47-202ENSMUST00000106441 Trbv30A0A0B4J1P1 111 aa13.21□□□□□ -0.3
Trim47-202ENSMUST00000106441 Reg3gO09049 174 aa13.21□□□□□ -0.3
Trim47-202ENSMUST00000106441 Prelid3aQ8VE85 172 aa13.21□□□□□ -0.3
Trim47-202ENSMUST00000106441 Gm9887F6RFI0 207 aa13.2□□□□□ -0.3
Trim47-202ENSMUST00000106441 CenpwQ3URR0 86 aa13.2□□□□□ -0.3
Trim47-202ENSMUST00000106441 Gm904Q3V2L5 102 aa13.2□□□□□ -0.3
Trim47-202ENSMUST00000106441 Atp5g3P56384 141 aa13.2□□□□□ -0.3
Trim47-202ENSMUST00000106441 Cox6cQ9CPQ1 76 aa13.2□□□□□ -0.3
Trim47-202ENSMUST00000106441 Rbmy1bQ60990 380 aa13.19□□□□□ -0.3
Trim47-202ENSMUST00000106441 A830031A19RikQ8BNT5 113 aa13.19□□□□□ -0.3
Trim47-202ENSMUST00000106441 Stab1Q8R4Y4 2571 aa13.19□□□□□ -0.3
Trim47-202ENSMUST00000106441 Rnf152Q8BG47 203 aa13.18□□□□□ -0.3
Trim47-202ENSMUST00000106441 Klk1b4P00757 256 aa13.17□□□□□ -0.3
Trim47-202ENSMUST00000106441 P01786 117 aa13.17□□□□□ -0.3
Trim47-202ENSMUST00000106441 Spata3Q9D9T6 193 aa13.17□□□□□ -0.3
Trim47-202ENSMUST00000106441 PolqQ8CGS6 2544 aa13.17□□□□□ -0.3
Trim47-202ENSMUST00000106441 Trdv5A0A075B661 115 aa13.17□□□□□ -0.3
Trim47-202ENSMUST00000106441 SmcpP15265 143 aa13.16□□□□□ -0.3
Trim47-202ENSMUST00000106441 Gm9747Q810H1 104 aa13.16□□□□□ -0.3
Trim47-202ENSMUST00000106441 Gm17472A0A075B683 117 aa13.15□□□□□ -0.3
Trim47-202ENSMUST00000106441 Rmi2Q3UPE3 149 aa13.15□□□□□ -0.3
Trim47-202ENSMUST00000106441 Fam110dQ80X91 271 aa13.15□□□□□ -0.3
Trim47-202ENSMUST00000106441 Gm29423A0A087WRM1 55 aa13.15□□□□□ -0.3
Trim47-202ENSMUST00000106441 Smim20D3Z7Q2 69 aa13.15□□□□□ -0.3
Trim47-202ENSMUST00000106441 Gm10251J3QPM5 127 aa13.15□□□□□ -0.3
Trim47-202ENSMUST00000106441 4930470P17RikQ9D542 155 aa13.15□□□□□ -0.3
Trim47-202ENSMUST00000106441 Gm10767Q3TQP0 103 aa13.14□□□□□ -0.31
Trim47-202ENSMUST00000106441 Notch2O35516 2470 aa13.13□□□□□ -0.31
Trim47-202ENSMUST00000106441 Trav7-6A0A075B640 112 aa13.13□□□□□ -0.31
Trim47-202ENSMUST00000106441 Glrp1E9Q9S8 174 aa13.13□□□□□ -0.31
Trim47-202ENSMUST00000106441 Gm815Q3UWS2 115 aa13.13□□□□□ -0.31
Trim47-202ENSMUST00000106441 Tmem101Q91VP7 257 aa13.13□□□□□ -0.31
Trim47-202ENSMUST00000106441 Nbeal2Q6ZQA0 2742 aa13.13□□□□□ -0.31
Trim47-202ENSMUST00000106441 Igkv4-91A0A075B5L2 119 aa13.13□□□□□ -0.31
Trim47-202ENSMUST00000106441 Foxc1Q61572 553 aa13.13□□□□□ -0.31
Trim47-202ENSMUST00000106441 HampQ9EQ21 83 aa13.13□□□□□ -0.31
Trim47-202ENSMUST00000106441 Col6a5A6H584 2640 aa13.12□□□□□ -0.31
Trim47-202ENSMUST00000106441 Igkv4-78A0A0A6YYE5 119 aa13.12□□□□□ -0.31
Trim47-202ENSMUST00000106441 P01738 130 aa13.12□□□□□ -0.31
Trim47-202ENSMUST00000106441 AngP21570 145 aa13.12□□□□□ -0.31
Trim47-202ENSMUST00000106441 Ighv1-61P01749 117 aa13.11□□□□□ -0.31
Trim47-202ENSMUST00000106441 Q99M08 65 aa13.11□□□□□ -0.31
Trim47-202ENSMUST00000106441 Gm20730A0A075B5J6 119 aa13.11□□□□□ -0.31
Trim47-202ENSMUST00000106441 Zc2hc1bQ9D534 172 aa13.11□□□□□ -0.31
Trim47-202ENSMUST00000106441 Tenm1Q9WTS4 2731 aa13.1□□□□□ -0.31
Trim47-202ENSMUST00000106441 PkigO70139 76 aa13.1□□□□□ -0.31
Trim47-202ENSMUST00000106441 CirbpP60824 172 aaKnown RBP13.1□□□□□ -0.31
Trim47-202ENSMUST00000106441 4930415O20RikQ8CDT5 131 aa13.1□□□□□ -0.31
Trim47-202ENSMUST00000106441 Trav9n-2A0A0G2JDP3 113 aa13.08□□□□□ -0.31
Trim47-202ENSMUST00000106441 1700010B08RikQ9DAI7 102 aa13.08□□□□□ -0.31
Trim47-202ENSMUST00000106441 Trav13d-1A0A075B606 110 aa13.07□□□□□ -0.32
Trim47-202ENSMUST00000106441 Gm3443F7CCV5 94 aa13.07□□□□□ -0.32
Trim47-202ENSMUST00000106441 Igsf10Q3V1M1 2594 aa13.07□□□□□ -0.32
Trim47-202ENSMUST00000106441 Znf414Q9DCK4 299 aa13.07□□□□□ -0.32
Trim47-202ENSMUST00000106441 Fgf23Q9EPC2 251 aa13.07□□□□□ -0.32
Trim47-202ENSMUST00000106441 Smim10l1A0A087WNQ7 89 aa13.05□□□□□ -0.32
Trim47-202ENSMUST00000106441 Ly6c2P0CW03 131 aa13.05□□□□□ -0.32
Trim47-202ENSMUST00000106441 Cops9Q3U898 57 aa13.05□□□□□ -0.32
Trim47-202ENSMUST00000106441 Fxyd5P97808 178 aa13.04□□□□□ -0.32
Trim47-202ENSMUST00000106441 4930432M17RikQ3V0W9 174 aa13.04□□□□□ -0.32
Trim47-202ENSMUST00000106441 Rpl36aP83882 106 aaKnown RBP13.02□□□□□ -0.33
Trim47-202ENSMUST00000106441 Ss18l2Q9D174 77 aa13.02□□□□□ -0.33
Trim47-202ENSMUST00000106441 Gm36176A0A1W2P8D5 158 aa13.01□□□□□ -0.33
Trim47-202ENSMUST00000106441 P01823 113 aa13.01□□□□□ -0.33
Trim47-202ENSMUST00000106441 Ndufa3Q9CQ91 84 aa13.01□□□□□ -0.33
Trim47-202ENSMUST00000106441 SpinklQ8CEK3 90 aa13□□□□□ -0.33
Trim47-202ENSMUST00000106441 Trav3-4A0A075B654 114 aa13□□□□□ -0.33
Trim47-202ENSMUST00000106441 Phpt1Q9DAK9 124 aa12.99□□□□□ -0.33
Trim47-202ENSMUST00000106441 Hspg2Q05793 3707 aaKnown RBP12.99□□□□□ -0.33
Trim47-202ENSMUST00000106441 Apoc4Q61268 124 aa12.98□□□□□ -0.33
Trim47-202ENSMUST00000106441 Eif4ebp3Q80VV3 101 aa12.98□□□□□ -0.33
Trim47-202ENSMUST00000106441 Igkv4-79A0A075B5L8 119 aa12.97□□□□□ -0.33
Trim47-202ENSMUST00000106441 Ighv1-62-1A0A075B5U3 116 aa12.97□□□□□ -0.33
Trim47-202ENSMUST00000106441 Gm10542F6XDR3 90 aa12.97□□□□□ -0.33
Trim47-202ENSMUST00000106441 Gm9922Q8C3P1 144 aa12.97□□□□□ -0.33
Trim47-202ENSMUST00000106441 Cd164l2Q9D6W7 172 aa12.97□□□□□ -0.33
Trim47-202ENSMUST00000106441 Dmbt1Q60997 2085 aa12.97□□□□□ -0.33
Trim47-202ENSMUST00000106441 Gm7075D3Z497 112 aa12.97□□□□□ -0.33
Trim47-202ENSMUST00000106441 Gm10577Q3UDV9 132 aa12.97□□□□□ -0.33
Trim47-202ENSMUST00000106441 Defb42Q8BVB5 75 aa12.97□□□□□ -0.33
Trim47-202ENSMUST00000106441 Gm11020F6ZGD5 61 aa12.96□□□□□ -0.34
Trim47-202ENSMUST00000106441 Atp5g1Q9CR84 136 aa12.96□□□□□ -0.34
Trim47-202ENSMUST00000106441 9430069I07RikQ9CX21 111 aa12.96□□□□□ -0.34
Trim47-202ENSMUST00000106441 TeppQ6IMH0 216 aa12.95□□□□□ -0.34
Trim47-202ENSMUST00000106441 Cdc42se2Q8BGH7 84 aa12.95□□□□□ -0.34
Trim47-202ENSMUST00000106441 Shisa2Q8QZV2 295 aa12.94□□□□□ -0.34
Trim47-202ENSMUST00000106441 Ly6hQ9WUC3 139 aa12.94□□□□□ -0.34
Trim47-202ENSMUST00000106441 Srrm2Q8BTI8 2703 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms