RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Igkv3-7A0A0G2JE31 119 aa11.23□□□□□ -0.61
Ccdc50-203ENSMUST00000100026 BC107364E9Q5A2 140 aa11.23□□□□□ -0.61
Ccdc50-203ENSMUST00000100026 Col4a4Q9QZR9 1682 aa11.23□□□□□ -0.61
Ccdc50-203ENSMUST00000100026 Smim20D3Z7Q2 69 aa11.22□□□□□ -0.61
Ccdc50-203ENSMUST00000100026 C1qcQ02105 246 aa11.22□□□□□ -0.61
Ccdc50-203ENSMUST00000100026 Gm44965A0A0N4SVR3 59 aa11.22□□□□□ -0.61
Ccdc50-203ENSMUST00000100026 Wfdc13Q5DQQ6 81 aa11.22□□□□□ -0.61
Ccdc50-203ENSMUST00000100026 FcorP0DJI6 106 aa11.21□□□□□ -0.61
Ccdc50-203ENSMUST00000100026 Rpl28P41105 137 aaKnown RBP11.21□□□□□ -0.61
Ccdc50-203ENSMUST00000100026 Ube2d2P62838 147 aa11.21□□□□□ -0.61
Ccdc50-203ENSMUST00000100026 P06320 134 aa11.21□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Wfdc12Q9JHY3 85 aa11.21□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Plxnb3Q9QY40 1902 aa11.21□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 CrygeQ03740 174 aa11.21□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 ScxQ64124 207 aa11.21□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Chchd7Q8K2Q5 85 aa11.21□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Defb40Q70KL2 73 aa11.2□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Fgfbp3Q1HCM0 245 aa11.2□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 A130051J06RikQ8CAU1 227 aa11.2□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Notch3Q61982 2318 aa11.19□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Ube2d4D3YUH6 135 aa11.19□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Triap1Q9D8Z2 76 aa11.19□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Adm2Q7TNK8 150 aa11.19□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Tmem254aP0DN89 123 aa11.19□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Tmem254bP0DN90 123 aa11.19□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Tmem254cP0DN91 123 aa11.19□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Defb42Q8BVB5 75 aa11.19□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Prrc2aQ7TSC1 2158 aaKnown RBP11.19□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Gm11011D3Z3L9 86 aa11.18□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Gpha2Q925Q5 128 aa11.18□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Wfdc6bF6ULY1 148 aa11.18□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 D730001G18RikA0A087WQU7 115 aa11.17□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Gm5629P06327 117 aa11.17□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Pcnx2Q5DU28 2122 aa11.17□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Mrpl52Q9D0Y8 121 aa11.17□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Dscaml1Q4VA61 2053 aa11.17□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Ighv1-72P01751 139 aa11.17□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Tnfrsf23Q9ER63 176 aa11.17□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 1700074P13RikQ9D9G7 251 aa11.16□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 TshbP12656 138 aa11.16□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Sorl1O88307 2215 aaKnown RBP11.16□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 P01755 137 aa11.15□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Ly6hQ9WUC3 139 aa11.15□□□□□ -0.62
Ccdc50-203ENSMUST00000100026 Ighv2-6-8A0A0A6YWY9 116 aa11.14□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Vpreb2P13373 142 aa11.14□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Znf239P24399 201 aa11.14□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 P84750 121 aa11.14□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Trbv13-2A0A140T8N6 113 aa11.13□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 P01659 112 aa11.13□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Gm9922Q8C3P1 144 aa11.13□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Gm10490F6VBM2 120 aa11.13□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 AcacbE9Q4Z2 2448 aa11.13□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Cd27P41272 250 aa11.13□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Rnf152Q8BG47 203 aa11.13□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Tanc2A2A690 1994 aa11.13□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Gm20604F8WIA3 75 aa11.12□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Dido1Q8C9B9 2256 aaKnown RBP11.12□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Gm12689Q8BQU9 117 aa11.12□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Ramp1Q9WTJ5 148 aa11.12□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Ndufb1P0DN34 57 aa11.11□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Ovol3D3YYM0 189 aa11.11□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Ighv1-66A0A075B5X5 117 aa11.11□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 BaalcQ8VHV1 145 aa11.11□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 NbasE9Q411 2356 aa11.1□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Gm9887F6RFI0 207 aa11.1□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 H2al1aQ5M8Q2 105 aa11.1□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 H2al1eQ810S6 105 aa11.1□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Gm5468Q8C3D3 155 aa11.1□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 C2cd3Q52KB6 2323 aa11.1□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Gm26602M0QWA4 95 aa11.1□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 4930535I16RikQ9CUI2 172 aa11.1□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Tet2Q4JK59 1912 aaKnown RBP11.09□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Igf1P05017 153 aa11.08□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 P0C913 63 aa11.08□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 SvipQ3UZP4 77 aa11.08□□□□□ -0.63
Ccdc50-203ENSMUST00000100026 Rnf185Q91YT2 192 aa11.08□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 Brwd1Q921C3 2304 aa11.08□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 EnhoQ8K1D8 76 aa11.08□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 PtprsB0V2N1 1907 aa11.08□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 Ndufs5Q99LY9 106 aa11.07□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 H2al1mQ9DAD9 105 aa11.07□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 H2al1bA0A087WP11 105 aa11.07□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 Ighv2-6A0A075B6A7 116 aa11.07□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 Gm3285A0A1W2P7U0 201 aa11.05□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 Ighv8-5A0A0A6YY60 119 aa11.05□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 Defb11Q8R2I7 77 aa11.05□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 Ndufc1Q9CQY9 76 aa11.05□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 1700056E22RikF7CNM6 234 aa11.04□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 A930009A15RikG3UYI6 118 aa11.04□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 OtoglF7A4A7 2325 aa11.04□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 Cd164l2Q9D6W7 172 aa11.04□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 TeppQ6IMH0 216 aa11.03□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 Pcnx3Q8VI59 2028 aa11.03□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 Arid1bE9Q4N7 2244 aa11.02□□□□□ -0.64
Ccdc50-203ENSMUST00000100026 4930564D02RikQ9D4S4 103 aa11.02□□□□□ -0.65
Ccdc50-203ENSMUST00000100026 Gm16223Q8CBM3 117 aa11.02□□□□□ -0.65
Ccdc50-203ENSMUST00000100026 Gm3443F7CCV5 94 aa11.01□□□□□ -0.65
Ccdc50-203ENSMUST00000100026 Gm16485Q8C4B7 115 aa11.01□□□□□ -0.65
Ccdc50-203ENSMUST00000100026 Tax1bp3Q9DBG9 124 aa11.01□□□□□ -0.65
Ccdc50-203ENSMUST00000100026 Atox1O08997 68 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms