RNA–Protein interactions for RNA: ENSMUST00000029812.13

Nfkb1-201, Transcript of Nuclear factor NF-kappa-B p105 subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nfkb1, Length 4,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1-201ENSMUST00000029812 Igkv4-79A0A075B5L8 119 aa11.24□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Trav14d-3-dv8A0A075B619 120 aa11.24□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 1700056E22RikF7CNM6 234 aa11.24□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Ighv1-11A0A0A6YWI9 117 aa11.24□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Gm10518F6UQQ9 182 aa11.23□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Gm10251J3QPM5 127 aa11.23□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Ighv1-66A0A075B5X5 117 aa11.23□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Defa27F2Z403 93 aa11.23□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 BB014433Q8C5R5 389 aa11.23□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Igkv1-122A0A140T8M9 119 aa11.23□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Gm10226O88253 85 aa11.22□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Gm9747Q810H1 104 aa11.22□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Fam222aQ6PGH4 453 aa11.22□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Polr2kQ63871 58 aa11.21□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 GfyJ3KML8 504 aa11.21□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Pglyrp1O88593 182 aa11.21□□□□□ -0.61
Nfkb1-201ENSMUST00000029812 Samd13D3YUG0 102 aa11.21□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Sfta2E9PXB6 77 aa11.21□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Lyrm9Q3UN90 78 aa11.21□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Q9D8Q6 235 aa11.21□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Ighv1-85A0A075B5Y6 117 aa11.2□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Gm17472A0A075B683 117 aa11.2□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Ighv8-5A0A0A6YY60 119 aa11.2□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 2010109I03RikQ9CQ11 111 aa11.2□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Ubl5Q9EPV8 73 aa11.2□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Usp24B1AY13 2617 aaKnown RBP11.2□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Gm10490F6VBM2 120 aa11.2□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 P01729 129 aa11.2□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Fhl2O70433 279 aa11.19□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Ly6hQ9WUC3 139 aa11.19□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Igkv1-88A0A140T8N1 120 aa11.19□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Smim1P0C8K7 78 aa11.19□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Cd99Q8VCN6 175 aa11.19□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Igkv4-78A0A0A6YYE5 119 aa11.19□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 AtrQ9JKK8 2635 aa11.18□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 AngP21570 145 aa11.18□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Higd2aQ9CQJ1 106 aa11.17□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Adgrg4B7ZCC9 3073 aa11.17□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 P01823 113 aa11.16□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Notch1Q01705 2531 aa11.16□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Tmem243B2RVB9 118 aa11.16□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Col27a1Q5QNQ9 1845 aa11.16□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Ighv3-3A0A0A6YWL2 116 aa11.15□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Dph3Q8K0W9 82 aa11.15□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 1700010B08RikQ9DAI7 102 aa11.15□□□□□ -0.62
Nfkb1-201ENSMUST00000029812 Gphb5Q812B2 130 aa11.15□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Fn1P11276 2477 aaKnown RBP11.14□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Wdr38Q9D994 303 aa11.14□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Hectd1Q69ZR2 2618 aaKnown RBP11.14□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Spink13Q3UTS8 97 aa11.14□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Cyyr1Q8VIH7 165 aa11.14□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 FasnP19096 2504 aaKnown RBP11.14□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Smim20D3Z7Q2 69 aa11.14□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 4930535I16RikQ9CUI2 172 aa11.14□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Trav4d-3A0A075B625 110 aa11.13□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Trav11A0A0B4J1J9 114 aa11.13□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Tm2d2Q8R0I4 213 aa11.13□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Spry2Q9QXV8 315 aa11.13□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Klk11Q9QYN3 276 aa11.13□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Ighv8-12A0A0G2JDE1 119 aa11.11□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Akap13E9Q394 2776 aa11.11□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 A0A286YCN5 57 aa11.11□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 A0A286YE02 88 aa11.11□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Cfc1P97766 202 aa11.11□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 9430069I07RikQ9CX21 111 aa11.1□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Naa38Q9D2U5 125 aa11.1□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Ighv1-62-1A0A075B5U3 116 aa11.09□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 B230217C12RikE9Q3Z1 139 aa11.09□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Psmb8P28063 276 aa11.09□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 Igf1P05017 153 aa11.09□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 CnfnQ6PCW6 111 aa11.09□□□□□ -0.63
Nfkb1-201ENSMUST00000029812 CdsnQ7TPC1 561 aa11.08□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 RelnQ60841 3461 aa11.08□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Rpl18aP62717 176 aaKnown RBP11.08□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 ColqO35348 457 aa11.07□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Ppp1r32Q148A4 427 aa11.07□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 BC048502Q80Y74 154 aa11.07□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Trav9n-4A0A075B631 113 aa11.06□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Ly6c2P0CW03 131 aa11.06□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Prr9Q8BV84 116 aa11.06□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 P01755 137 aa11.06□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Rpl32P62911 135 aaKnown RBP11.06□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Wfdc12Q9JHY3 85 aa11.06□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 DmdP11531 3678 aa11.06□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Defb12Q8K4N3 78 aa11.06□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Ubr5Q80TP3 2792 aa11.06□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Reg3bP35230 175 aa11.05□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Rpl39lQ9CQD0 51 aa11.05□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 FlnaQ8BTM8 2647 aaKnown RBP11.05□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Trav4-3A0A0B4J1K1 110 aa11.05□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Fxyd5P97808 178 aa11.05□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 ScxQ64124 207 aa11.04□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Ighv2-6-8A0A0A6YWY9 116 aa11.04□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Gm10647E9Q8X0 124 aa11.03□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Crip2Q9DCT8 208 aaKnown RBP11.03□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Ube2d1P61080 147 aaKnown RBP11.03□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 A930009A15RikG3UYI6 118 aa11.03□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 CrygdP04342 174 aa11.03□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Gm2916Q9D9B9 127 aa11.03□□□□□ -0.64
Nfkb1-201ENSMUST00000029812 Camk2n2Q78WH7 79 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 86.8 ms