RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Foxi1Q922I5 372 aa7.11□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Ighv2-6A0A075B6A7 116 aa7.1□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Sdhaf1Q3U276 118 aa7.1□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 PemtQ61907 199 aa7.1□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Spag11Q8K4N2 71 aa7.1□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 MtorQ9JLN9 2549 aa7.1□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 P01753 117 aa7.1□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Gm3618D3Z4P5 127 aa7.09□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 1500011B03RikQ3TTH7 73 aa7.09□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Gm2916Q9D9B9 127 aa7.09□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 1520401A03RikA0A0J9YVH6 598 aa7.09□□□□□ -1.27
Sh3rf1-202ENSMUST00000209611 Ighv8-8A0A0A6YXQ0 119 aa7.08□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Ighv1-63A0A075B5X2 117 aa7.08□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Trbv16A0A0B4J1H3 115 aa7.08□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 4930564D02RikQ9D4S4 103 aa7.08□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Prrc2aQ7TSC1 2158 aaKnown RBP7.08□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Igkv4-62A0A0G2JDW9 117 aa7.08□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Gm26661M0QWV4 156 aa7.08□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 FlncQ8VHX6 2726 aaKnown RBP7.08□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 P01811 117 aa7.07□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 CrygdP04342 174 aa7.07□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Tcl1b4P56844 120 aa7.07□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 4930470P17RikQ9D542 155 aa7.07□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Snai3Q9QY31 287 aa7.07□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Hbb-b2P02089 147 aa7.07□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Cox7cP17665 63 aa7.07□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Ovol2Q8CIV7 274 aa7.07□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Prr13Q9CQJ5 137 aa7.07□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 C1qcQ02105 246 aa7.06□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Plac1Q9JI83 173 aa7.06□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Myo18bE9PV66 2605 aa7.06□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Gm3443F7CCV5 94 aa7.06□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Ndufc2Q9CQ54 120 aa7.06□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Epg5Q80TA9 2572 aa7.06□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Gcn1E9PVA8 2671 aaKnown RBP7.06□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 SbsponQ3UPR9 264 aa7.06□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Gm815Q3UWS2 115 aa7.06□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Cep192E9Q4Y4 2514 aaKnown RBP7.06□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Mast4Q811L6 2618 aa7.05□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Gm9767G3X930 207 aa7.05□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 CenpwQ3URR0 86 aa7.05□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Trbv13-1A0A0B4J1P8 112 aa7.05□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Ss18Q62280 418 aa7.05□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Fam19a5Q91WE9 132 aa7.05□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 FlnaQ8BTM8 2647 aaKnown RBP7.05□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Ighv1-66A0A075B5X5 117 aa7.05□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Atp5eP56382 52 aa7.05□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Gm17359A0A0G2JEB7 487 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 P01738 130 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Tmem258P61166 79 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Olfr313Q5NC55 308 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Gm16223Q8CBM3 117 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Naa38Q9D2U5 125 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 OtogO55225 2910 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Vsig4F6TUL9 280 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Zfp462B1AWL2 2495 aaKnown RBP7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Hbb-bsA8DUK4 147 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 P01794 123 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Hbb-b1P02088 147 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Lyrm9Q3UN90 78 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Smim26Q3V460 107 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Klf13Q9JJZ6 289 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Ank2Q8C8R3 3898 aa7.04□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 FlnbQ80X90 2602 aaKnown RBP7.03□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Trdv5A0A075B661 115 aa7.03□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 P01843 105 aa7.03□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Egr2P08152 470 aa7.03□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 SpinklQ8CEK3 90 aa7.03□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Pou2af1Q64693 256 aa7.03□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 2310009B15RikA0A0A6YWI4 143 aa7.02□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Phpt1Q9DAK9 124 aa7.02□□□□□ -1.28
Sh3rf1-202ENSMUST00000209611 Pglyrp1O88593 182 aa7.02□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 9430069I07RikQ9CX21 111 aa7.02□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Trav9n-2A0A0G2JDP3 113 aa7.02□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Fam110dQ80X91 271 aa7.02□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Q9DAQ5 155 aa7.02□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Hivep3A2A884 2348 aa7.01□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Gemin7Q9CWY4 129 aa7.01□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Tmem263Q9DAM7 115 aa7.01□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Phlda3Q9WV95 125 aa7.01□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Dad1P61804 113 aa7.01□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Defb47Q30KN1 79 aa7.01□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Lyzl4Q9D925 145 aa7.01□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Crlf1Q9JM58 425 aa7.01□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Igf1P05017 153 aa7.01□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Tmem213Q08EA8 116 aa7.01□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Cox17P56394 63 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Spink8Q09TK9 105 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Q99M08 65 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Wdr38Q9D994 303 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Ndufs7Q9DC70 224 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Higd1aQ9JLR9 95 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Trav14-1A0A0G2JF94 121 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Gm5629P06327 117 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Rnf152Q8BG47 203 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Gm10490F6VBM2 120 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Ly6c2P0CW03 131 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Setd2E9Q5F9 2537 aa7□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 P0C913 63 aa6.99□□□□□ -1.29
Sh3rf1-202ENSMUST00000209611 Gata1P17679 413 aa6.99□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms