RNA–Protein interactions for RNA: ENSMUST00000115658.5

Pcdha11-201, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-201ENSMUST00000115658 Ighv13-2A0A0A6YWN3 119 aa10.37□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Igkv1-88A0A140T8N1 120 aa10.37□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Tcte2E9PY37 120 aa10.37□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 9130230L23RikQ8CC80 163 aa10.37□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Gm10577Q3UDV9 132 aa10.37□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Atox1O08997 68 aaKnown RBP10.37□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Tfpi2O35536 230 aa10.37□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Rps28P62858 69 aaKnown RBP10.36□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Ighv3-3A0A0A6YWL2 116 aa10.36□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 H2al1aQ5M8Q2 105 aa10.36□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Dscaml1Q4VA61 2053 aa10.36□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Gm37389A0A0A6YW05 95 aa10.36□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Sec61gP60060 68 aa10.36□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Ube2bP63147 152 aa10.36□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 H2al1eQ810S6 105 aa10.36□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Eml6Q5SQM0 1958 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Ighv1-66A0A075B5X5 117 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Igkv8-34A0A0G2JDU0 121 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Med12A2AGH6 2190 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Cfap46E9Q2C0 2641 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Usf3B2RUQ2 2221 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Cacna1hO88427 2365 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Fer1l4A3KGK3 1992 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Gm15557A6PWY0 234 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Map6d1Q14BB9 191 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Q9CX25 107 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Qrich2A0A140LIY9 2337 aa10.35□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Ighv10-1A0A0B4J1J6 119 aa10.34□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Gm17577J3QNF7 156 aa10.34□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Ndufs5Q99LY9 106 aa10.34□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 SnurfQ9WU12 71 aa10.34□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 H2al1kJ3QP08 105 aa10.34□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Adamts20P59511 1906 aa10.33□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Fgfbp3Q1HCM0 245 aa10.33□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 P84751 237 aa10.33□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Trav9n-4A0A075B631 113 aa10.32□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 4930524J08RikQ9CUJ5 163 aa10.32□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Gm10322F7D7I4 111 aa10.32□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Ighv1-72P01751 139 aa10.32□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Ndufb1P0DN34 57 aa10.32□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 PrcdQ00LT2 53 aa10.32□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Cox7b2Q9D2H1 82 aa10.32□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Ighv1-62-1A0A075B5U3 116 aa10.31□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 1700011M02RikB1AX35 88 aa10.31□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Igkv8-18A0A0B4J1J3 123 aa10.31□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Defb45Q3V490 66 aa10.31□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 UqcrqQ9CQ69 82 aa10.3□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 9430015G10RikA2ASP7 199 aa10.3□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 SbsponQ3UPR9 264 aa10.3□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Cnot1Q6ZQ08 2375 aaKnown RBP10.3□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Gm26566Q8CAC1 153 aa10.3□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Myo7bQ99MZ6 2113 aa10.29□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Mapk1ip1lQ8BH93 242 aa10.29□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Tns1E9Q0S6 1888 aaKnown RBP10.29□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Ube2aQ9Z255 152 aa10.28□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Gm9805F6YK59 57 aa10.28□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 P01643 108 aa10.28□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Gm10735Q3US96 136 aa10.28□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Dkk4Q8VEJ3 221 aa10.28□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Asxl3Q8C4A5 2259 aa10.28□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Trbv13-2A0A140T8N6 113 aa10.28□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Rpl28P41105 137 aaKnown RBP10.27□□□□□ -0.76
Pcdha11-201ENSMUST00000115658 Rtl10D3YWW5 146 aa10.27□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Gm21994F6T2D2 329 aa10.27□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Ncor1Q60974 2453 aa10.27□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Camk2n2Q78WH7 79 aa10.27□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Pcnx3Q8VI59 2028 aa10.27□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Gm10647E9Q8X0 124 aa10.27□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 PoleQ9WVF7 2283 aa10.27□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Tanc2A2A690 1994 aa10.26□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Wfdc11A2A5H7 82 aa10.26□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Gm6899Q3USS0 134 aa10.26□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Gm17521F6QAC8 156 aa10.26□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 4930518I15RikQ3V2W7 57 aa10.26□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Frem1Q684R7 2191 aa10.26□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Gm37988J3QM41 62 aa10.26□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 P01755 137 aa10.25□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 BaalcQ8VHV1 145 aa10.25□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Sdk1Q3UH53 2193 aa10.25□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 TroQ6DIC6 2087 aa10.25□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Gm5153P01627 120 aa10.25□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Jmjd1cQ69ZK6 2350 aa10.24□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Igkv4-92A0A0B4J1I2 117 aa10.24□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 2010109I03RikQ9CQ11 111 aa10.24□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Pla2g2dQ9WVF6 144 aa10.24□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Edn3P48299 214 aa10.23□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Defb26Q30KN7 186 aa10.23□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 9530003J23RikQ8BM26 151 aa10.23□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Ighv2-3A0A075B696 115 aa10.23□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Gm10401E9Q3K6 71 aa10.23□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Gphb5Q812B2 130 aa10.23□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Gm11011D3Z3L9 86 aa10.22□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 A830005F24RikQ8BRT5 167 aa10.22□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 H2al1mQ9DAD9 105 aa10.22□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Cox7bP56393 80 aa10.21□□□□□ -0.77
Pcdha11-201ENSMUST00000115658 Fam19a1Q7TPG8 133 aa10.21□□□□□ -0.78
Pcdha11-201ENSMUST00000115658 4930546C10RikE9Q4Y3 121 aa10.2□□□□□ -0.78
Pcdha11-201ENSMUST00000115658 Spint4Q9D263 159 aa10.2□□□□□ -0.78
Pcdha11-201ENSMUST00000115658 Klk11Q9QYN3 276 aa10.2□□□□□ -0.78
Pcdha11-201ENSMUST00000115658 Cd164Q9R0L9 197 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 104.5 ms