RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Akap6E9Q9K8 2307 aa17.57■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Esp4A8R0T8 117 aa17.57■□□□□ 0.4
Ubp1-203ENSMUST00000116492 B230217C12RikE9Q3Z1 139 aa17.57■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Rnf152Q8BG47 203 aa17.57■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Rbmxl2Q9DAE2 385 aaKnown RBP17.57■□□□□ 0.4
Ubp1-203ENSMUST00000116492 PerpQ9JK95 193 aa17.57■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Srp14P16254 110 aaKnown RBP17.56■□□□□ 0.4
Ubp1-203ENSMUST00000116492 AngP21570 145 aa17.56■□□□□ 0.4
Ubp1-203ENSMUST00000116492 A530064D06RikQ8BNV8 229 aa17.56■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Ndufs7Q9DC70 224 aa17.56■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Gm45753A0A1C7CYU8 86 aa17.56■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Gm42674D3YUT9 64 aa17.56■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Trav7d-3Q5R1I1 112 aa17.56■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Fam110dQ80X91 271 aa17.55■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Arid1bE9Q4N7 2244 aa17.55■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Fgfbp3Q1HCM0 245 aa17.54■□□□□ 0.4
Ubp1-203ENSMUST00000116492 SrarpQ3ULG3 163 aa17.54■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Smim10l1A0A087WNQ7 89 aa17.54■□□□□ 0.4
Ubp1-203ENSMUST00000116492 March3Q8BRX9 218 aa17.54■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Avpi1Q9D7H4 142 aa17.54■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Gm9242J3QNY1 357 aa17.53■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Gm21370Q3T9V6 190 aa17.53■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Ankrd17Q99NH0 2603 aaKnown RBP17.53■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Trav7-2Q5R1I3 112 aa17.53■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Cysltr1Q99JA4 352 aa17.53■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Zfyve26Q5DU37 2529 aa17.52■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Ankrd39Q9D2X0 183 aa17.52■□□□□ 0.4
Ubp1-203ENSMUST00000116492 BC067074F6RXI4 2391 aa17.52■□□□□ 0.4
Ubp1-203ENSMUST00000116492 Defa37K9J724 93 aa17.51■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Defa5P28312 93 aa17.51■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Bahcc1Q3UHR0 2643 aa17.51■□□□□ 0.39
Ubp1-203ENSMUST00000116492 LeprotO89013 131 aa17.51■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Nav3Q80TN7 2359 aa17.51■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Ighv2-6-8A0A0A6YWY9 116 aa17.5■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Gata1P17679 413 aa17.49■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Mpv17l2Q8VIK2 200 aa17.49■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Atp5lQ9CPQ8 103 aa17.49■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Gm28044L7N1X0 119 aa17.48■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Gm815Q3UWS2 115 aa17.48■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Fam19a4Q7TPG5 135 aa17.48■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Dmrt3Q80WT2 476 aa17.48■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Gm45717A0A1B0GT68 152 aa17.48■□□□□ 0.39
Ubp1-203ENSMUST00000116492 OdaphJ3QNT8 126 aa17.48■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Ube2d1P61080 147 aaKnown RBP17.48■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Ccl25O35903 144 aa17.47■□□□□ 0.39
Ubp1-203ENSMUST00000116492 P01738 130 aa17.47■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Gtf2h5Q8K2X8 71 aa17.47■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Ociad2Q9D8W7 154 aa17.47■□□□□ 0.39
Ubp1-203ENSMUST00000116492 HampQ9EQ21 83 aa17.47■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Gemin7Q9CWY4 129 aa17.47■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Cby1Q9D1C2 127 aa17.46■□□□□ 0.39
Ubp1-203ENSMUST00000116492 Triap1Q9D8Z2 76 aa17.45■□□□□ 0.38
Ubp1-203ENSMUST00000116492 P01741 114 aa17.45■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Q99M08 65 aa17.45■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Ankrd11E9Q4F7 2643 aa17.45■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Ank2Q8C8R3 3898 aa17.44■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Gm6812B1AXU1 112 aa17.44■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Gm7075D3Z497 112 aa17.44■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Srsf9Q9D0B0 222 aaKnown RBP17.44■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Defb26Q30KN7 186 aa17.44■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Cox11Q6P8I6 275 aa17.44■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Tmem263Q9DAM7 115 aa17.44■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Pgpep1Q9ESW8 209 aa17.44■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Gm26920S4R2A5 56 aa17.44■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Tcrg-C1A0A075B5Z0 172 aa17.42■□□□□ 0.38
Ubp1-203ENSMUST00000116492 3110070M22RikQ9DAQ7 118 aa17.42■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Trav9n-2A0A0G2JDP3 113 aa17.42■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Fam240bJ3QMB3 78 aa17.42■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Try10Q792Z1 246 aaKnown RBP17.42■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Slamf6Q9ET39 351 aa17.42■□□□□ 0.38
Ubp1-203ENSMUST00000116492 LbhQ9CX60 105 aa17.41■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Crip2Q9DCT8 208 aaKnown RBP17.41■□□□□ 0.38
Ubp1-203ENSMUST00000116492 PolP10400 120 aa17.41■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Mrpl35Q9CQL6 188 aa17.41■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Mapk1ip1lQ8BH93 242 aa17.4■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Ighv1-11A0A0A6YWI9 117 aa17.39■□□□□ 0.38
Ubp1-203ENSMUST00000116492 Gata3P23772 443 aa17.39■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Spink13Q3UTS8 97 aa17.39■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Igkv4-91A0A075B5L2 119 aa17.38■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Tac4Q99N14 128 aa17.38■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Eif4ebp1Q60876 117 aa17.38■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Cfap126Q6P8X9 189 aa17.38■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Ighv8-5A0A0A6YY60 119 aa17.37■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Fxyd5P97808 178 aa17.37■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Gm10322F7D7I4 111 aa17.36■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Defb42Q8BVB5 75 aa17.36■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Gm9922Q8C3P1 144 aa17.36■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Tspan13Q9D8C2 204 aa17.36■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Ighv1-72P01751 139 aa17.36■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Gatd1Q8BFQ8 220 aa17.36■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Rpl24Q8BP67 157 aaKnown RBP17.36■□□□□ 0.37
Ubp1-203ENSMUST00000116492 HilpdaQ9JLS0 64 aa17.36■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Chd6A3KFM7 2711 aa17.36■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Gm17472A0A075B683 117 aa17.35■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Hint1P70349 126 aaKnown RBP17.35■□□□□ 0.37
Ubp1-203ENSMUST00000116492 BsnO88737 3942 aa17.35■□□□□ 0.37
Ubp1-203ENSMUST00000116492 BC106179Q8C9L1 186 aa17.35■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Phlda3Q9WV95 125 aa17.35■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Esp24A8R0V6 68 aa17.34■□□□□ 0.37
Ubp1-203ENSMUST00000116492 Lypd5Q9D7Z7 256 aa17.34■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms