RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Usmg5Q78IK2 58 aa6.75□□□□□ -1.33
Col28a1-201ENSMUST00000115537 OtosQ8R448 89 aa6.75□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Tmem14cQ9CQN6 114 aa6.75□□□□□ -1.33
Col28a1-201ENSMUST00000115537 AcanQ61282 2132 aaKnown RBP6.75□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Pygo1Q9D0P5 417 aa6.75□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Dchs2A0A0A6YW72 3346 aa6.75□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Nsd1O88491 2588 aaKnown RBP6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Igkv4-91A0A075B5L2 119 aa6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Gm17455G3UW87 128 aa6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Edn2P22389 175 aa6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Tex26Q0VB26 296 aa6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Znf740Q6NZQ6 180 aa6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 4930447F04RikA2AFR2 126 aa6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Samd13D3YUG0 102 aa6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 PmvkQ9D1G2 192 aa6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Q9D8Q6 235 aa6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 BlcapP62951 87 aa6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Gm5464Q3UY29 175 aa6.74□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ighv1-55A0A075B5W6 117 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ighv1-77A0A0G2JGS9 117 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Cops9Q3U898 57 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Kiaa1549Q68FD9 1940 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Gm15217A2CG07 155 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 MalO09198 153 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Psmb8P28063 276 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Gatd1Q8BFQ8 220 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Csdc2Q91YQ3 154 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ankrd39Q9D2X0 183 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ighv1-62-3P01754 117 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Gm10735Q3US96 136 aa6.73□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Mrps12O35680 139 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 SrarpQ3ULG3 163 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Prr3Q811B5 190 aaKnown RBP6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 E130116L18RikQ8BMV6 101 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Gm17732E9Q5I2 61 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Defa27F2Z403 93 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ebi3O35228 228 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Trav6-4A0A075B6B4 115 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Trbv13-1A0A0B4J1P8 112 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Gm2564F6Z9S8 108 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Ccl19O70460 108 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Rpl39P62892 51 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Znf575Q3TXZ1 239 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Srsf2Q62093 221 aaKnown RBP6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 A530064D06RikQ8BNV8 229 aa6.72□□□□□ -1.33
Col28a1-201ENSMUST00000115537 Gm9936Q8C864 160 aa6.71□□□□□ -1.33
Col28a1-201ENSMUST00000115537 4930415O20RikQ8CDT5 131 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Fam24aQ8CF27 98 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Igkv4-90A0A075B5L3 117 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 B230307C23RikQ8BLB2 64 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 GalmQ8K157 342 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 3110018I06RikQ9CXS0 120 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Igsf10Q3V1M1 2594 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Celsr1O35161 3034 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Celsr3Q91ZI0 3301 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gm5941Q497P9 117 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Nbl1Q61477 178 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Fam216aQ9DB54 251 aa6.71□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Stab1Q8R4Y4 2571 aa6.7□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Ighv1-9A0A0A6YW37 117 aa6.7□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Q4KKZ1 196 aa6.7□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gm16223Q8CBM3 117 aa6.7□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Mrpl52Q9D0Y8 121 aa6.7□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Fam216bQ8CC14 138 aa6.7□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Tep1P97499 2629 aa6.7□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gm10135F6TEE5 83 aa6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Egr2P08152 470 aa6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Ang4Q3TMQ6 144 aa6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 CnfnQ6PCW6 111 aa6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Crip2Q9DCT8 208 aaKnown RBP6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Col6a5A6H584 2640 aa6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Mpv17l2Q8VIK2 200 aa6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Prrc2cQ3TLH4 2846 aaKnown RBP6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gata1P17679 413 aa6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Defb45Q3V490 66 aa6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Apoc4Q61268 124 aa6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Mrpl35Q9CQL6 188 aa6.69□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gm5629P06327 117 aa6.68□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Pet100P0DJE0 76 aa6.68□□□□□ -1.34
Col28a1-201ENSMUST00000115537 LeprotO89013 131 aa6.68□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Igf1P05017 153 aa6.68□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Rmi2Q3UPE3 149 aa6.68□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Ighv3-8A0A075B5T0 131 aa6.68□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Igkv20-101-2A0A0G2JDU3 113 aa6.68□□□□□ -1.34
Col28a1-201ENSMUST00000115537 9230109A22RikQ8BHE6 111 aa6.68□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Zc2hc1bQ9D534 172 aa6.68□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Tmem243B2RVB9 118 aa6.68□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Obox8V9GWY9 217 aa6.68□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gm29666A0A087WQ99 126 aa6.67□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gm3618D3Z4P5 127 aa6.67□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gm7102J3QQ10 178 aa6.67□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gm2916Q9D9B9 127 aa6.67□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gm20730A0A075B5J6 119 aa6.67□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Dchs1E9PVD3 3291 aa6.66□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gm9958Q8C9U4 106 aa6.66□□□□□ -1.34
Col28a1-201ENSMUST00000115537 HampQ9EQ21 83 aa6.66□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Ighv3-1A0A075B5S6 116 aa6.66□□□□□ -1.34
Col28a1-201ENSMUST00000115537 NpwA0A1L1STR8 176 aa6.66□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Gm7075D3Z497 112 aa6.66□□□□□ -1.34
Col28a1-201ENSMUST00000115537 Glrp1E9Q9S8 174 aa6.66□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms