RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Zfp462B1AWL2 2495 aaKnown RBP13.64□□□□□ -0.23
Trim47-202ENSMUST00000106441 Srp14P16254 110 aaKnown RBP13.64□□□□□ -0.23
Trim47-202ENSMUST00000106441 Tspan13Q9D8C2 204 aa13.64□□□□□ -0.23
Trim47-202ENSMUST00000106441 Ighv1-50A0A075B5W1 117 aa13.63□□□□□ -0.23
Trim47-202ENSMUST00000106441 Igkv4-74A0A0B4J1I3 119 aa13.63□□□□□ -0.23
Trim47-202ENSMUST00000106441 Gm6812B1AXU1 112 aa13.63□□□□□ -0.23
Trim47-202ENSMUST00000106441 CicQ924A2 2510 aa13.63□□□□□ -0.23
Trim47-202ENSMUST00000106441 Scgb1b24B1B0N6 92 aa13.62□□□□□ -0.23
Trim47-202ENSMUST00000106441 Gm21370Q3T9V6 190 aa13.62□□□□□ -0.23
Trim47-202ENSMUST00000106441 Ss18Q62280 418 aa13.62□□□□□ -0.23
Trim47-202ENSMUST00000106441 Srsf9Q9D0B0 222 aaKnown RBP13.62□□□□□ -0.23
Trim47-202ENSMUST00000106441 Q9D8Q6 235 aa13.62□□□□□ -0.23
Trim47-202ENSMUST00000106441 Arhgap32Q811P8 2089 aa13.62□□□□□ -0.23
Trim47-202ENSMUST00000106441 P01747 120 aa13.62□□□□□ -0.23
Trim47-202ENSMUST00000106441 P06328 117 aa13.62□□□□□ -0.23
Trim47-202ENSMUST00000106441 PolP10400 120 aa13.62□□□□□ -0.23
Trim47-202ENSMUST00000106441 Anapc13Q8R034 74 aa13.62□□□□□ -0.23
Trim47-202ENSMUST00000106441 Tac4Q99N14 128 aa13.62□□□□□ -0.23
Trim47-202ENSMUST00000106441 Egr2P08152 470 aa13.61□□□□□ -0.23
Trim47-202ENSMUST00000106441 1500011B03RikQ3TTH7 73 aa13.61□□□□□ -0.23
Trim47-202ENSMUST00000106441 Polr2kQ63871 58 aa13.61□□□□□ -0.23
Trim47-202ENSMUST00000106441 Foxi1Q922I5 372 aa13.61□□□□□ -0.23
Trim47-202ENSMUST00000106441 Setd2E9Q5F9 2537 aa13.6□□□□□ -0.23
Trim47-202ENSMUST00000106441 Igfn1Q3KNY0 2849 aa13.6□□□□□ -0.23
Trim47-202ENSMUST00000106441 Bri3P28662 125 aa13.6□□□□□ -0.23
Trim47-202ENSMUST00000106441 Klk5Q9D140 293 aa13.6□□□□□ -0.23
Trim47-202ENSMUST00000106441 BC025920Q3US60 128 aa13.59□□□□□ -0.23
Trim47-202ENSMUST00000106441 Ndufb4Q9CQC7 129 aa13.59□□□□□ -0.23
Trim47-202ENSMUST00000106441 Rs1Q9Z1L4 224 aa13.59□□□□□ -0.23
Trim47-202ENSMUST00000106441 Trbv16A0A0B4J1H3 115 aa13.59□□□□□ -0.23
Trim47-202ENSMUST00000106441 LhbO09108 141 aa13.59□□□□□ -0.23
Trim47-202ENSMUST00000106441 Gm10226O88253 85 aa13.59□□□□□ -0.23
Trim47-202ENSMUST00000106441 Mllt11P97783 90 aa13.59□□□□□ -0.23
Trim47-202ENSMUST00000106441 Nav3Q80TN7 2359 aa13.59□□□□□ -0.23
Trim47-202ENSMUST00000106441 Ighv3-8A0A075B5T0 131 aa13.58□□□□□ -0.24
Trim47-202ENSMUST00000106441 Gm20499D3Z4G5 72 aa13.58□□□□□ -0.24
Trim47-202ENSMUST00000106441 Gm1553Q66VB7 94 aa13.58□□□□□ -0.24
Trim47-202ENSMUST00000106441 Ly86O88188 162 aa13.58□□□□□ -0.24
Trim47-202ENSMUST00000106441 PmvkQ9D1G2 192 aa13.58□□□□□ -0.24
Trim47-202ENSMUST00000106441 Muc4Q8JZM8 3443 aa13.57□□□□□ -0.24
Trim47-202ENSMUST00000106441 Gm10521E9PZK0 135 aa13.57□□□□□ -0.24
Trim47-202ENSMUST00000106441 Tmem262D3Z338 116 aa13.56□□□□□ -0.24
Trim47-202ENSMUST00000106441 Gphb5Q812B2 130 aa13.56□□□□□ -0.24
Trim47-202ENSMUST00000106441 Lyzl4Q9D925 145 aa13.56□□□□□ -0.24
Trim47-202ENSMUST00000106441 Smrp1Q2MH31 260 aa13.56□□□□□ -0.24
Trim47-202ENSMUST00000106441 Fbn1Q61554 2873 aaKnown RBP13.55□□□□□ -0.24
Trim47-202ENSMUST00000106441 Ighv1-63A0A075B5X2 117 aa13.55□□□□□ -0.24
Trim47-202ENSMUST00000106441 Gm17732E9Q5I2 61 aa13.55□□□□□ -0.24
Trim47-202ENSMUST00000106441 Cysltr1Q99JA4 352 aa13.55□□□□□ -0.24
Trim47-202ENSMUST00000106441 Ighv14-1A0A075B5R4 117 aa13.55□□□□□ -0.24
Trim47-202ENSMUST00000106441 Igkv4-62A0A0G2JDW9 117 aa13.55□□□□□ -0.24
Trim47-202ENSMUST00000106441 Tmem213Q08EA8 116 aa13.55□□□□□ -0.24
Trim47-202ENSMUST00000106441 CdsnQ7TPC1 561 aa13.55□□□□□ -0.24
Trim47-202ENSMUST00000106441 Il1f10Q8R459 152 aa13.55□□□□□ -0.24
Trim47-202ENSMUST00000106441 Ighv1-12A0A0A6YXJ9 117 aa13.54□□□□□ -0.24
Trim47-202ENSMUST00000106441 Q5BN45 167 aa13.54□□□□□ -0.24
Trim47-202ENSMUST00000106441 Dmrt3Q80WT2 476 aa13.54□□□□□ -0.24
Trim47-202ENSMUST00000106441 Timm17aQ9Z0V8 171 aa13.54□□□□□ -0.24
Trim47-202ENSMUST00000106441 Nat8b-psE0CYC6 232 aa13.53□□□□□ -0.24
Trim47-202ENSMUST00000106441 Foxi2Q3I5G5 311 aa13.53□□□□□ -0.24
Trim47-202ENSMUST00000106441 4930596D02RikQ3V0H9 216 aa13.53□□□□□ -0.24
Trim47-202ENSMUST00000106441 3110018I06RikQ9CXS0 120 aa13.53□□□□□ -0.24
Trim47-202ENSMUST00000106441 Gm42674D3YUT9 64 aa13.52□□□□□ -0.24
Trim47-202ENSMUST00000106441 SrarpQ3ULG3 163 aa13.52□□□□□ -0.24
Trim47-202ENSMUST00000106441 Gm9961Q8BNV2 113 aa13.52□□□□□ -0.24
Trim47-202ENSMUST00000106441 Trbv13-1A0A0B4J1P8 112 aa13.52□□□□□ -0.25
Trim47-202ENSMUST00000106441 Pglyrp1O88593 182 aa13.52□□□□□ -0.25
Trim47-202ENSMUST00000106441 Rpl39P62892 51 aa13.52□□□□□ -0.25
Trim47-202ENSMUST00000106441 Itpr2Q9Z329 2701 aa13.51□□□□□ -0.25
Trim47-202ENSMUST00000106441 Ighv1-5A0A0A6YWG2 117 aa13.51□□□□□ -0.25
Trim47-202ENSMUST00000106441 Igkv2-137A0A0B4J1H6 120 aa13.51□□□□□ -0.25
Trim47-202ENSMUST00000106441 Gm9767G3X930 207 aa13.51□□□□□ -0.25
Trim47-202ENSMUST00000106441 Chd9Q8BYH8 2885 aa13.51□□□□□ -0.25
Trim47-202ENSMUST00000106441 Cd99Q8VCN6 175 aa13.51□□□□□ -0.25
Trim47-202ENSMUST00000106441 Ccl19O70460 108 aa13.5□□□□□ -0.25
Trim47-202ENSMUST00000106441 Triap1Q9D8Z2 76 aa13.5□□□□□ -0.25
Trim47-202ENSMUST00000106441 HilpdaQ9JLS0 64 aa13.5□□□□□ -0.25
Trim47-202ENSMUST00000106441 AtrQ9JKK8 2635 aa13.5□□□□□ -0.25
Trim47-202ENSMUST00000106441 Ighv1-85A0A075B5Y6 117 aa13.49□□□□□ -0.25
Trim47-202ENSMUST00000106441 C1qcQ02105 246 aa13.49□□□□□ -0.25
Trim47-202ENSMUST00000106441 Gm2564F6Z9S8 108 aa13.49□□□□□ -0.25
Trim47-202ENSMUST00000106441 F11rO88792 300 aa13.48□□□□□ -0.25
Trim47-202ENSMUST00000106441 Snrpd3P62320 126 aaKnown RBP13.48□□□□□ -0.25
Trim47-202ENSMUST00000106441 Atp5lQ9CPQ8 103 aa13.48□□□□□ -0.25
Trim47-202ENSMUST00000106441 Wnk1P83741 2377 aa13.48□□□□□ -0.25
Trim47-202ENSMUST00000106441 Ighv1-52A0A0A6YXC3 117 aa13.48□□□□□ -0.25
Trim47-202ENSMUST00000106441 Gm3233E9Q2H5 230 aa13.47□□□□□ -0.25
Trim47-202ENSMUST00000106441 Higd1aQ9JLR9 95 aa13.47□□□□□ -0.25
Trim47-202ENSMUST00000106441 NpwA0A1L1STR8 176 aa13.47□□□□□ -0.25
Trim47-202ENSMUST00000106441 Rpl13aP19253 203 aaKnown RBP13.47□□□□□ -0.25
Trim47-202ENSMUST00000106441 1700020N15RikL7MTX3 112 aa13.46□□□□□ -0.25
Trim47-202ENSMUST00000106441 CckP09240 115 aa13.46□□□□□ -0.25
Trim47-202ENSMUST00000106441 Fam216aQ9DB54 251 aa13.46□□□□□ -0.25
Trim47-202ENSMUST00000106441 Gm28044L7N1X0 119 aa13.45□□□□□ -0.26
Trim47-202ENSMUST00000106441 Mapk1ip1lQ8BH93 242 aa13.45□□□□□ -0.26
Trim47-202ENSMUST00000106441 Lgals4Q8K419 326 aa13.45□□□□□ -0.26
Trim47-202ENSMUST00000106441 Gm933J3QPC1 141 aa13.45□□□□□ -0.26
Trim47-202ENSMUST00000106441 GalmQ8K157 342 aa13.45□□□□□ -0.26
Trim47-202ENSMUST00000106441 Phlda3Q9WV95 125 aa13.45□□□□□ -0.26
Trim47-202ENSMUST00000106441 P06329 120 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms