RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Spata25Q9DA57 226 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Tcte2E9PY37 120 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Snrpd3P62320 126 aaKnown RBP7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Nbl1Q61477 178 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Gm21060J3KMU4 56 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Tmem254aP0DN89 123 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Tmem254bP0DN90 123 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Tmem254cP0DN91 123 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Q4KKZ1 196 aa7.12□□□□□ -1.27
Ctc1-201ENSMUST00000021278 OtoglF7A4A7 2325 aa7.11□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Fhl2O70433 279 aa7.11□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Cfap126Q6P8X9 189 aa7.11□□□□□ -1.27
Ctc1-201ENSMUST00000021278 GgnQ80WJ1 673 aa7.11□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Mpv17l2Q8VIK2 200 aa7.11□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Trav13d-1A0A075B606 110 aa7.11□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Gm29666A0A087WQ99 126 aa7.11□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Gm16381A0A1Y7VKT9 73 aa7.11□□□□□ -1.27
Ctc1-201ENSMUST00000021278 TeppQ6IMH0 216 aa7.11□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Gcn1E9PVA8 2671 aaKnown RBP7.11□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Cep192E9Q4Y4 2514 aaKnown RBP7.1□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Egr2P08152 470 aa7.1□□□□□ -1.27
Ctc1-201ENSMUST00000021278 EnhoQ8K1D8 76 aa7.1□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Gm17732E9Q5I2 61 aa7.1□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Mrps12O35680 139 aa7.1□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Bub3Q9WVA3 326 aa7.1□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Gm33815A0A087WNV3 176 aa7.1□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Lamtor3O88653 124 aa7.1□□□□□ -1.27
Ctc1-201ENSMUST00000021278 P01638 115 aa7.1□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Snai3Q9QY31 287 aa7.1□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Ighv1-37A0A0A6YW32 117 aa7.09□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Igkv5-37A0A140T8N4 115 aa7.09□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Rnf152Q8BG47 203 aa7.09□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Trav4-3A0A0B4J1K1 110 aa7.09□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Gm5153P01627 120 aa7.09□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Gata4Q08369 441 aa7.09□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Serp1Q9Z1W5 66 aa7.09□□□□□ -1.27
Ctc1-201ENSMUST00000021278 P0C1Z5 52 aa7.09□□□□□ -1.27
Ctc1-201ENSMUST00000021278 Gm11213A0A1B0GR83 88 aa7.09□□□□□ -1.28
Ctc1-201ENSMUST00000021278 A0A286YE02 88 aa7.09□□□□□ -1.28
Ctc1-201ENSMUST00000021278 6330409D20RikA2AK85 162 aa7.09□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Igkv14-100A0A0G2JG36 117 aa7.08□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Gm21748Q3UE70 102 aa7.08□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Klk11Q9QYN3 276 aa7.08□□□□□ -1.28
Ctc1-201ENSMUST00000021278 C2cd3Q52KB6 2323 aa7.08□□□□□ -1.28
Ctc1-201ENSMUST00000021278 P01819 144 aa7.08□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Fam110dQ80X91 271 aa7.08□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Bean1Q9EQG5 255 aa7.08□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Igkv4-62A0A0G2JDW9 117 aa7.08□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Wdr86D3Z757 380 aa7.08□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Ntf4Q80VU4 209 aa7.08□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Igkv4-81A0A0G2JEY5 119 aa7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Zcchc24B2RVL6 241 aaKnown RBP7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 LeprotO89013 131 aa7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 P01783 136 aa7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 A530084C06RikQ3UTW2 186 aa7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Cxcl10P17515 98 aa7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Spata46Q4FZF2 204 aa7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Rnf185Q91YT2 192 aa7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Rnase2bO35292 155 aa7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Asphd1Q2TA57 360 aa7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 5730596B20RikQ8BQ08 205 aa7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Shisa2Q8QZV2 295 aa7.07□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Dopey1Q8BL99 2399 aa7.06□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Gm20708H3BKF4 155 aa7.06□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Rpl36aP83882 106 aaKnown RBP7.06□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Tff3Q62395 81 aa7.06□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Gm16223Q8CBM3 117 aa7.06□□□□□ -1.28
Ctc1-201ENSMUST00000021278 4930447F04RikA2AFR2 126 aa7.06□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Ndufa12Q7TMF3 145 aaKnown RBP7.06□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Gm19345G3UYD9 124 aa7.06□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Tmem223Q9CQE2 199 aaKnown RBP7.06□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Wdr31Q9JHB4 367 aa7.06□□□□□ -1.28
Ctc1-201ENSMUST00000021278 7530416G11RikJ3QJX6 159 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Ighv1-62-3P01754 117 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Dchs1E9PVD3 3291 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 H2al1bA0A087WP11 105 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 H2al1kJ3QP08 105 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Lst1O08843 95 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 H2al1eQ810S6 105 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 H2al1mQ9DAD9 105 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Trav13n-1A0A0G2JEU8 110 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Trav9d-4A0A0G2JG37 103 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Cd164Q9R0L9 197 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Ighv1-7A0A075B5T7 117 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Rtl10D3YWW5 146 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Spink4O35679 86 aa7.05□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Igkv13-85A0A075B666 115 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Gm17727E9Q4V7 109 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Cox7a1P56392 80 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Pde6hP61249 83 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Nbeal1E9PYP2 2688 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Prp2P05143 317 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Fam19a4Q7TPG5 135 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 RhohQ9D3G9 191 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Hivep3A2A884 2348 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Ighv1-23A0A0A6YVW3 117 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Gm6899Q3USS0 134 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 A130051J06RikQ8CAU1 227 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 4930556J24RikQ9D4U7 146 aa7.04□□□□□ -1.28
Ctc1-201ENSMUST00000021278 Ly6hQ9WUC3 139 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms