RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 TshbP12656 138 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm7489Q3UT34 171 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 5730522E02RikQ5SP45 163 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Mustn1Q99JI1 82 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 PerpQ9JK95 193 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Snai3Q9QY31 287 aa6.3□□□□□ -1.4
Bdnf-202ENSMUST00000111042 P01786 117 aa6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Egr2P08152 470 aa6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Vwc2lQ505H4 222 aa6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 TroQ6DIC6 2087 aa6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Hcfc1Q61191 2045 aaKnown RBP6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Klk1b4P00757 256 aa6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Defa-rs7P50715 91 aa6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 NrepQ07475 68 aa6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Rab37Q9JKM7 223 aa6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Spink1P09036 80 aa6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Rpl39P62892 51 aa6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 1500011B03RikQ3TTH7 73 aa6.29□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Hivep3A2A884 2348 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Rpl35aO55142 110 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 P01811 117 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Hoxd3P09027 433 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm815Q3UWS2 115 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Odf3Q920N1 254 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Cysltr1Q99JA4 352 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Myo18bE9PV66 2605 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 C2cd3Q52KB6 2323 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 LhbO09108 141 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Ighv2-3A0A075B696 115 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Gm16223Q8CBM3 117 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Slamf6Q9ET39 351 aa6.28□□□□□ -1.4
Bdnf-202ENSMUST00000111042 Setd2E9Q5F9 2537 aa6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Ighv1-75A0A075B5Y2 117 aa6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gm1968Q3T9I3 115 aa6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 H1fxQ80ZM5 188 aa6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Ly6g5bQ8K1T4 194 aa6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Zfp462B1AWL2 2495 aaKnown RBP6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Ighv12-3A0A075B5T1 117 aa6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 BC107364E9Q5A2 140 aa6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Pxt1Q8K459 51 aa6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gm45213A0A0U1RNZ6 101 aa6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Tmem101Q91VP7 257 aa6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 HampQ9EQ21 83 aa6.27□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Igkv4-70A0A0B4J1I5 116 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Mtatp8P03930 67 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Samd5Q3V1H9 173 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Odf1Q61999 247 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Tmem263Q9DAM7 115 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Trav9n-2A0A0G2JDP3 113 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 P01738 130 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Cd69P37217 199 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 CnfnQ6PCW6 111 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Spata25Q9DA57 226 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 OdaphJ3QNT8 126 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gm933J3QPC1 141 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Plscr4P58196 326 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Hint1P70349 126 aaKnown RBP6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 C1qcQ02105 246 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Tal2Q62282 108 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Ndufs7Q9DC70 224 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Pgpep1Q9ESW8 209 aa6.26□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Hectd1Q69ZR2 2618 aaKnown RBP6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Vps13cQ8BX70 3748 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Adgrg4B7ZCC9 3073 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Il1f10Q8R459 152 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Ighv1-62-2A0A0A6YXZ4 119 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 F11rO88792 300 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Dmrt3Q80WT2 476 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Ucn2Q99ML8 113 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 4930544G11RikQ9CR99 193 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Unc79Q0KK59 2596 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Trbv16A0A0B4J1H3 115 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gm45717A0A1B0GT68 152 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Fam222aQ6PGH4 453 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Cyyr1Q8VIH7 165 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Lyzl4Q9D925 145 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Dpm2Q9Z324 84 aa6.25□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Ankrd11E9Q4F7 2643 aa6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 P01741 114 aa6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 P18527 97 aa6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Il19Q8CJ70 176 aa6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Rnf114Q9ET26 229 aa6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Ndufa1O35683 70 aa6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Tac4Q99N14 128 aa6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Epg5Q80TA9 2572 aa6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Rpl36aP83882 106 aaKnown RBP6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Trav7d-3Q5R1I1 112 aa6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Prelid3aQ8VE85 172 aa6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Lyrm7Q9DA03 104 aa6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gcn1E9PVA8 2671 aaKnown RBP6.24□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Tcrg-C1A0A075B5Z0 172 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gm6812B1AXU1 112 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Cox6b1P56391 86 aaKnown RBP6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 CirbpP60824 172 aaKnown RBP6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 PpdpfQ9CR37 115 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Gm5629P06327 117 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Foxi2Q3I5G5 311 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Q9DAB9 146 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 Zzef1Q5SSH7 2924 aa6.23□□□□□ -1.41
Bdnf-202ENSMUST00000111042 NbeaQ9EPN1 2936 aa6.23□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms