RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 Hivep2Q3UHF7 2430 aa9.59□□□□□ -0.87
Ebf3-203ENSMUST00000168203 1700067P10RikG3X8U2 183 aa9.59□□□□□ -0.87
Ebf3-203ENSMUST00000168203 Dmrt3Q80WT2 476 aa9.59□□□□□ -0.87
Ebf3-203ENSMUST00000168203 Higd1aQ9JLR9 95 aa9.59□□□□□ -0.87
Ebf3-203ENSMUST00000168203 Ighv1-37A0A0A6YW32 117 aa9.59□□□□□ -0.87
Ebf3-203ENSMUST00000168203 C920008G01RikA0A0B4J1N1 112 aa9.59□□□□□ -0.87
Ebf3-203ENSMUST00000168203 Cdkn1aP39689 159 aa9.59□□□□□ -0.87
Ebf3-203ENSMUST00000168203 C2cd3Q52KB6 2323 aa9.59□□□□□ -0.87
Ebf3-203ENSMUST00000168203 GlrxQ9QUH0 107 aa9.58□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ighv1-81A0A075B5Y4 117 aa9.58□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Lect2O88803 151 aa9.58□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ankrd39Q9D2X0 183 aa9.58□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Q9DAQ5 155 aa9.58□□□□□ -0.88
Ebf3-203ENSMUST00000168203 P18527 97 aa9.57□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Dchs1E9PVD3 3291 aa9.57□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ighv1-55A0A075B5W6 117 aa9.57□□□□□ -0.88
Ebf3-203ENSMUST00000168203 SpinklQ8CEK3 90 aa9.57□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Rasl11bQ922H7 247 aa9.57□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Celsr1O35161 3034 aa9.57□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Gm33815A0A087WNV3 176 aa9.57□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Rtl10D3YWW5 146 aa9.57□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Defb33Q30KN3 62 aa9.57□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Spink13Q3UTS8 97 aa9.57□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ccl24Q9JKC0 119 aa9.57□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ighv2-6A0A075B6A7 116 aa9.56□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Foxi2Q3I5G5 311 aa9.56□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Gm12689Q8BQU9 117 aa9.56□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Phpt1Q9DAK9 124 aa9.56□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Trav7-6A0A075B640 112 aa9.56□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Pde6hP61249 83 aa9.56□□□□□ -0.88
Ebf3-203ENSMUST00000168203 PmvkQ9D1G2 192 aa9.56□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Sptbn4E9PX29 2561 aa9.56□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Smim10l1A0A087WNQ7 89 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Cox8cA6H666 72 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Hoxb4P10284 250 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Srp14P16254 110 aaKnown RBP9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Tex26Q0VB26 296 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Olfr313Q5NC55 308 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ccl12Q62401 104 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ndufa4Q62425 82 aaKnown RBP9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Crip3Q6Q6R3 243 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Spag11Q8K4N2 71 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ube2wQ8VDW4 151 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Pgpep1lQ9CWB5 130 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 BptfA2A654 3036 aaKnown RBP9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Gm2174F6ZVF2 133 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Svs5P30933 122 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ndufa11Q9D8B4 141 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Tspan13Q9D8C2 204 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Gm20481G3UXK4 153 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Mrps12O35680 139 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 CntfrO88507 372 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 P01725 110 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Fam216bQ8CC14 138 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 9130230L23RikQ8CC80 163 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Tmem219Q9D123 240 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ovol1Q9WTJ2 267 aa9.55□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Hoxd3P09027 433 aa9.54□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Rpl39P62892 51 aa9.54□□□□□ -0.88
Ebf3-203ENSMUST00000168203 UrahQ9CRB3 118 aa9.54□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Iah1Q9DB29 249 aa9.54□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Gm29666A0A087WQ99 126 aa9.54□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Gm28539A0A087WSL9 92 aa9.54□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Rpl32-psP17932 135 aa9.54□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Zc2hc1bQ9D534 172 aa9.54□□□□□ -0.88
Ebf3-203ENSMUST00000168203 SpegQ62407 3262 aa9.54□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Gm20730A0A075B5J6 119 aa9.54□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ccl19O70460 108 aa9.53□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Cfc1P97766 202 aa9.53□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Triap1Q9D8Z2 76 aa9.53□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ighv1-20A0A0A6YX66 117 aa9.53□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ang2Q64438 145 aa9.53□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Ighv1-31A0A0A6YWK5 117 aa9.53□□□□□ -0.88
Ebf3-203ENSMUST00000168203 Igkv20-101-2A0A0G2JDU3 113 aa9.52□□□□□ -0.89
Ebf3-203ENSMUST00000168203 4930447F04RikA2AFR2 126 aa9.52□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Foxc1Q61572 553 aa9.52□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Zfp951A0A087WRH0 451 aa9.52□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Gm9958Q8C9U4 106 aa9.52□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Abca2P41234 2434 aa9.52□□□□□ -0.89
Ebf3-203ENSMUST00000168203 KalrnA2CG49 2964 aa9.52□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Defa21Q8C1P2 93 aa9.52□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Ovol3D3YYM0 189 aa9.51□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Gm17732E9Q5I2 61 aa9.51□□□□□ -0.89
Ebf3-203ENSMUST00000168203 P01802 115 aa9.51□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Vps13cQ8BX70 3748 aa9.51□□□□□ -0.89
Ebf3-203ENSMUST00000168203 CirbpP60824 172 aaKnown RBP9.51□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Pygo1Q9D0P5 417 aa9.51□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Zfp292Q9Z2U2 2698 aa9.5□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Amn1B8JKV0 258 aa9.5□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Gp9O88186 177 aa9.5□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Tmem101Q91VP7 257 aa9.5□□□□□ -0.89
Ebf3-203ENSMUST00000168203 RetnQ99P87 114 aa9.5□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Fam216aQ9DB54 251 aa9.5□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Lce6aD3YV94 81 aa9.5□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Nav3Q80TN7 2359 aa9.5□□□□□ -0.89
Ebf3-203ENSMUST00000168203 P01837 106 aa9.49□□□□□ -0.89
Ebf3-203ENSMUST00000168203 4930415O20RikQ8CDT5 131 aa9.49□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Parm1Q923D3 296 aa9.49□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Tmem89Q9DA04 169 aa9.49□□□□□ -0.89
Ebf3-203ENSMUST00000168203 Gm884A2A9H6 3643 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms