RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 PtprqP0C5E4 2300 aa5.69□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Ssbp2Q9CYZ8 361 aa5.69□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Gm35549A0A0N4SUS7 141 aa5.69□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Runx1Q03347 451 aa5.69□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Polr3kQ9CQZ7 108 aa5.69□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Q9D727 114 aa5.69□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Hoxd3P09027 433 aa5.69□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Olfr313Q5NC55 308 aa5.69□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Socs3O35718 225 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Pglyrp4Q0VB07 374 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 PifoQ9D9W1 207 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Pla2g2dQ9WVF6 144 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Trav7-2Q5R1I3 112 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 CstadQ9D245 104 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Gm20481G3UXK4 153 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Igkv4-71A0A0G2JEH0 117 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Cd27P41272 250 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Fam19a2Q7TPG7 131 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Cysrt1Q9D1E4 142 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 A530064D06RikQ8BNV8 229 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Q8K1L6 76 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Ighv12-3A0A075B5T1 117 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Gm5089A1L3C8 106 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 GrnP28798 589 aaKnown RBP5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Vwc2lQ505H4 222 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Gm9961Q8BNV2 113 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Tmem52Q9D702 196 aa5.68□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Trav14d-1A0A075B6B1 121 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Ighv1-12A0A0A6YXJ9 117 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 P01837 106 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Hoxb4P10284 250 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 AW146154Q3TPQ7 468 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 C730034F03RikQ8BGL5 111 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Ube2wQ8VDW4 151 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 LitafQ9JLJ0 161 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Col4a2P08122 1707 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Gm37388A0A0A6YY46 143 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Pla2g2cP48076 150 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Ppp1r32Q148A4 427 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Ighv1-75A0A075B5Y2 117 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Vsig4F6TUL9 280 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 F11rO88792 300 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 P01745 121 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Spaca3Q9D9X8 221 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Ubl5Q9EPV8 73 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Ighv2-6A0A075B6A7 116 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 NdpP48744 131 aa5.67□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Fhl1P97447 280 aaKnown RBP5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Olfr312Q7TRZ9 308 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Tm2d3Q8BJ83 261 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Q9CX25 107 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Card19Q9D1I2 183 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Tnfrsf13bQ9ET35 249 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Ighv8-6A0A0A6YXA3 118 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Igkv8-24A0A140T8P5 121 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Reg3gO09049 174 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Trav9-1A0A075B601 112 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Trav12-3A0A075B648 115 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Cox7cP17665 63 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Odf1Q61999 247 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Hcfc1Q61191 2045 aaKnown RBP5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 SnrpcQ62241 159 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Epg5Q80TA9 2572 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Igkv4-70A0A0B4J1I5 116 aa5.66□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Igkv3-2A0A075B5P0 119 aa5.65□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Gm21060J3KMU4 56 aa5.65□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Ccl25O35903 144 aa5.65□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Tmem263Q9DAM7 115 aa5.65□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Tcl1b5P56845 121 aa5.65□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Rpl35aO55142 110 aa5.65□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Gtsf1Q9DAN6 167 aa5.65□□□□□ -1.5
Scn3a-201ENSMUST00000066432 Gm9958Q8C9U4 106 aa5.65□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Sprr3O09116 238 aa5.65□□□□□ -1.51
Scn3a-201ENSMUST00000066432 P01750 117 aa5.65□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Lynx1P0DP60 116 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ndufb4Q9CQC7 129 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Mrpl32Q9DCI9 187 aaKnown RBP5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Abca12E9Q876 2595 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ighv6-7A0A0A6YWU3 119 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Atp5g3P56384 141 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Tmem213Q08EA8 116 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 FshbQ60687 130 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Atp5g1Q9CR84 136 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm10295Q8CCF3 114 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 P01811 117 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm21370Q3T9V6 190 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Pou2af1Q64693 256 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Pla2g2aP31482 146 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Znf787Q8BIF9 381 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ndufs7Q9DC70 224 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ccdc179J3QM76 67 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ca1P13634 261 aa5.64□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Samd13D3YUG0 102 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Ang5Q5GAN1 145 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm5129F6YHA9 99 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Atp6v0e2Q91XE7 81 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Gm20604F8WIA3 75 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Leap2Q91V13 76 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Rnase1P00683 149 aa5.63□□□□□ -1.51
Scn3a-201ENSMUST00000066432 Dph3Q8K0W9 82 aa5.63□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms