RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Chchd5Q9CQP3 110 aa8.75□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Gm16223Q8CBM3 117 aa8.75□□□□□ -1.01
Topbp1-201ENSMUST00000035164 PmvkQ9D1G2 192 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Abca12E9Q876 2595 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Defb30Q30KN4 75 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Spink10Q8CAC8 162 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Gm14137Q8CE97 175 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Atp5lQ9CPQ8 103 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Col5a1O88207 1838 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 MtorQ9JLN9 2549 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Gm29423A0A087WRM1 55 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Defa2P28309 93 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Gemin7Q9CWY4 129 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Rpl39P62892 51 aa8.74□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Tac4Q99N14 128 aa8.73□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Xlr5cQ9JJR2 179 aa8.73□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Ighv1-80A0A075B5Y3 117 aa8.73□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Defb47Q30KN1 79 aa8.73□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Olfr313Q5NC55 308 aa8.73□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Bub3Q9WVA3 326 aa8.73□□□□□ -1.01
Topbp1-201ENSMUST00000035164 ApomQ9Z1R3 190 aa8.73□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Myo9aQ8C170 2542 aa8.73□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Cysltr1Q99JA4 352 aa8.73□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Tcrg-C1A0A075B5Z0 172 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Gm29666A0A087WQ99 126 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Rpl36-ps4A0A140T8U4 117 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Ccl19O70460 108 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Myo18bE9PV66 2605 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Gm2174F6ZVF2 133 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Higd1aQ9JLR9 95 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Setd2E9Q5F9 2537 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Foxi2Q3I5G5 311 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 B430305J03RikQ8BQQ8 176 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 SNORCQ9CXL7 121 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Wfdc15bQ9JHY4 80 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Zfhx4Q9JJN2 3550 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Ndufa4l2Q4FZG9 87 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Tmem210Q9D2F0 147 aa8.72□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Ighv1-9A0A0A6YW37 117 aa8.71□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Spink13Q3UTS8 97 aa8.71□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Klk5Q9D140 293 aa8.71□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Ighv1-23A0A0A6YVW3 117 aa8.71□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Gm10521E9PZK0 135 aa8.71□□□□□ -1.01
Topbp1-201ENSMUST00000035164 Gm10192Q3V0S1 108 aa8.71□□□□□ -1.01
Topbp1-201ENSMUST00000035164 C920008G01RikA0A0B4J1N1 112 aa8.71□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Nhlrc1Q8BR37 401 aa8.71□□□□□ -1.02
Topbp1-201ENSMUST00000035164 GlrxQ9QUH0 107 aa8.71□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Igkv4-91A0A075B5L2 119 aa8.71□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Defa16P50714 93 aa8.71□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Samd5Q3V1H9 173 aa8.71□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Gm5941Q497P9 117 aa8.71□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Tctex1d4Q8CDY7 219 aa8.71□□□□□ -1.02
Topbp1-201ENSMUST00000035164 DspE9Q557 2883 aaKnown RBP8.7□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Gm884A2A9H6 3643 aa8.7□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Samd10Q7TST3 202 aa8.7□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Lrcol1Q3URS3 161 aa8.7□□□□□ -1.02
Topbp1-201ENSMUST00000035164 A730015C16RikQ8C992 119 aa8.7□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Zzef1Q5SSH7 2924 aa8.7□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Defa-rs2P17534 91 aa8.69□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Crip3Q6Q6R3 243 aa8.69□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Minos1Q7TNS2 76 aa8.69□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Gm17455G3UW87 128 aa8.69□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Lect2O88803 151 aa8.69□□□□□ -1.02
Topbp1-201ENSMUST00000035164 RhohQ9D3G9 191 aa8.69□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Dpm2Q9Z324 84 aa8.69□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Hcfc1Q61191 2045 aaKnown RBP8.69□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Snai3Q9QY31 287 aa8.69□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Akap9Q70FJ1 3797 aa8.69□□□□□ -1.02
Topbp1-201ENSMUST00000035164 HampQ9EQ21 83 aa8.69□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Triap1Q9D8Z2 76 aa8.68□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Nbl1Q61477 178 aa8.68□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Myo15bI7HPW8 3033 aa8.68□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Gm10767Q3TQP0 103 aa8.68□□□□□ -1.02
Topbp1-201ENSMUST00000035164 3110018I06RikQ9CXS0 120 aa8.68□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Trav3-4A0A075B654 114 aa8.68□□□□□ -1.02
Topbp1-201ENSMUST00000035164 F11rO88792 300 aa8.68□□□□□ -1.02
Topbp1-201ENSMUST00000035164 P01748 117 aa8.68□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Dmrt3Q80WT2 476 aa8.68□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Shisa9Q9CZN4 424 aa8.68□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Dpm3Q9D1Q4 92 aa8.68□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Gm15217A2CG07 155 aa8.67□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Gm17732E9Q5I2 61 aa8.67□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Vwc2lQ505H4 222 aa8.67□□□□□ -1.02
Topbp1-201ENSMUST00000035164 9130230L23RikQ8CC80 163 aa8.67□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Spata46Q4FZF2 204 aa8.67□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Ifi27l2aQ8R412 90 aa8.67□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Ankrd39Q9D2X0 183 aa8.67□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Zc2hc1bQ9D534 172 aa8.67□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Gm9573F7C950 1606 aa8.67□□□□□ -1.02
Topbp1-201ENSMUST00000035164 P01837 106 aa8.67□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Egr2P08152 470 aa8.67□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Gm2564F6Z9S8 108 aa8.66□□□□□ -1.02
Topbp1-201ENSMUST00000035164 PkigO70139 76 aa8.66□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Olfr311Q5NC59 308 aa8.66□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Tspan13Q9D8C2 204 aa8.66□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Gm20730A0A075B5J6 119 aa8.66□□□□□ -1.02
Topbp1-201ENSMUST00000035164 4930544G11RikQ9CR99 193 aa8.66□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Fhl1P97447 280 aaKnown RBP8.66□□□□□ -1.02
Topbp1-201ENSMUST00000035164 Tmem14cQ9CQN6 114 aa8.66□□□□□ -1.02
Topbp1-201ENSMUST00000035164 MrapQ9D159 127 aa8.66□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 92.7 ms