RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 P01750 117 aa13.82□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 PlaurP35456 327 aa13.82□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Sdhaf1Q3U276 118 aa13.82□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Q9D727 114 aa13.81□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Cdx4Q07424 282 aa13.81□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Ss18Q62280 418 aa13.81□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 TctaQ8VEA7 122 aa13.8□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Pla2g2aP31482 146 aa13.8□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Umad1E0CX23 159 aa13.79□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Gcn1E9PVA8 2671 aaKnown RBP13.79□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Sprr3O09116 238 aa13.79□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 P06328 117 aa13.79□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Foxi1Q922I5 372 aa13.79□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Gm26920S4R2A5 56 aa13.79□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Nbeal1E9PYP2 2688 aa13.79□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Gm12057A0A087WR21 115 aa13.78□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Gm44965A0A0N4SVR3 59 aa13.78□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Gm9242J3QNY1 357 aa13.78□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Gm5629P06327 117 aa13.78□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Smim1P0C8K7 78 aa13.78□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Ighv3-3A0A0A6YWL2 116 aa13.77□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Mustn1Q99JI1 82 aa13.77□□□□□ -0.2
Ccdc3-201ENSMUST00000027988 Trav6-4A0A075B6B4 115 aa13.77□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Gm14137Q8CE97 175 aa13.77□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 3110018I06RikQ9CXS0 120 aa13.77□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Ighv1-75A0A075B5Y2 117 aa13.77□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Hbb-bsA8DUK4 147 aa13.77□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Gm10553J3QPF1 123 aa13.77□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Hbb-b1P02088 147 aa13.77□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Spink13Q3UTS8 97 aa13.77□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 HampQ9EQ21 83 aa13.77□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Gm9925F6T2U3 160 aa13.76□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Igkv4-69A0A0B4J1I6 116 aa13.76□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Wfdc15aQ8BH89 80 aa13.76□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Chac1Q8R3J5 223 aa13.76□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Abca12E9Q876 2595 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Ighv1-64A0A075B5X3 117 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Iglc1A0A0G2JE99 106 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Tmem262D3Z338 116 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 P01843 105 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Rpl39P62892 51 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 C1qcQ02105 246 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Cks1brtQ3UNC9 96 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Ociad2Q9D8W7 154 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Rs1Q9Z1L4 224 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Igkv2-137A0A0B4J1H6 120 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Defa-rs7P50715 91 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Trav7-2Q5R1I3 112 aa13.75□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Gm9961Q8BNV2 113 aa13.74□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Atp6v0bQ91V37 205 aa13.74□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Ighv1-50A0A075B5W1 117 aa13.74□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 P01741 114 aa13.74□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Egr2P08152 470 aa13.74□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Olfr313Q5NC55 308 aa13.74□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Ormdl2Q9CQZ0 153 aa13.74□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Ccl19O70460 108 aa13.73□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Csn3P06796 181 aa13.73□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Smim15Q3UTD9 74 aa13.73□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 A730046J19RikA0A1B0GSN8 89 aa13.73□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Gm42674D3YUT9 64 aa13.72□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Tmem170bP86050 132 aa13.72□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Tal2Q62282 108 aa13.72□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Pradc1Q9D9N8 188 aa13.72□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Ptpn13Q64512 2453 aa13.72□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Chd9Q8BYH8 2885 aa13.72□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 P01837 106 aa13.72□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Cox7cP17665 63 aa13.72□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Slc16a4Q8R0M8 500 aa13.72□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Q9CX63 252 aa13.72□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Gm10226O88253 85 aa13.71□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Defb45Q3V490 66 aa13.71□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Atxn7l1Q9CZ05 146 aa13.71□□□□□ -0.21
Ccdc3-201ENSMUST00000027988 Gm28044L7N1X0 119 aa13.71□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 P04219 140 aa13.71□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Fam240bJ3QMB3 78 aa13.7□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Rpl24Q8BP67 157 aaKnown RBP13.7□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Ndufb4Q9CQC7 129 aa13.7□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Sap30O88574 220 aa13.7□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 PolP10400 120 aa13.7□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 SrarpQ3ULG3 163 aa13.7□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Spag11Q8K4N2 71 aa13.7□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 PmvkQ9D1G2 192 aa13.7□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Ighv12-3A0A075B5T1 117 aa13.69□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Akap6E9Q9K8 2307 aa13.69□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Cox11Q6P8I6 275 aa13.69□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Tcrg-C3L7N479 172 aa13.69□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 P03985 172 aa13.69□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Usmg5Q78IK2 58 aa13.69□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 HilpdaQ9JLS0 64 aa13.69□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Clec5aQ9R007 190 aa13.69□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Ighv1-12A0A0A6YXJ9 117 aa13.68□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Gphb5Q812B2 130 aa13.68□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Tcf24V9GWT9 166 aa13.68□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Trbv17A0A140T8P8 114 aa13.68□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Hoxd3P09027 433 aa13.68□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Znhit3Q9CQK1 151 aa13.68□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Gm45753A0A1C7CYU8 86 aa13.67□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Gm17430F6RSK3 157 aa13.67□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Gm10271F6WY25 52 aa13.67□□□□□ -0.22
Ccdc3-201ENSMUST00000027988 Try10Q792Z1 246 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms