RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C SNX4P47057 423 aa9.81□□□□□ -0.84
SSN3YPL042C DIG1Q03063 452 aaKnown RBP9.81□□□□□ -0.84
SSN3YPL042C YMR114CQ04471 368 aaKnown RBP9.81□□□□□ -0.84
SSN3YPL042C HSH49Q99181 213 aaPredicted RBP9.81□□□□□ -0.84
SSN3YPL042C GFA1P14742 717 aaKnown RBP9.8□□□□□ -0.84
SSN3YPL042C RPN2P32565 945 aaKnown RBP9.8□□□□□ -0.84
SSN3YPL042C RRP1P35178 278 aaPredicted RBP9.8□□□□□ -0.84
SSN3YPL042C TVP23P38962 199 aa9.8□□□□□ -0.84
SSN3YPL042C SAH1P39954 449 aaKnown RBP9.8□□□□□ -0.84
SSN3YPL042C KAP123P40069 1113 aaKnown RBP9.8□□□□□ -0.84
SSN3YPL042C YER186CP40101 306 aa9.8□□□□□ -0.84
SSN3YPL042C INP51P40559 946 aaKnown RBP9.8□□□□□ -0.84
SSN3YPL042C YGR111WP53265 400 aa9.8□□□□□ -0.84
SSN3YPL042C YNL134CP53912 376 aaKnown RBP9.8□□□□□ -0.84
SSN3YPL042C ALG11P53954 548 aaKnown RBP9.8□□□□□ -0.84
SSN3YPL042C YDR222WQ04925 415 aa9.8□□□□□ -0.84
SSN3YPL042C PCD1Q12524 340 aa9.8□□□□□ -0.84
SSN3YPL042C GAL10P04397 699 aa9.8□□□□□ -0.84
SSN3YPL042C MST1P07236 462 aa9.8□□□□□ -0.84
SSN3YPL042C PRP6P19735 899 aaPredicted RBP9.8□□□□□ -0.84
SSN3YPL042C HSP60P19882 572 aaKnown RBP9.8□□□□□ -0.84
SSN3YPL042C PRP28P23394 588 aa9.8□□□□□ -0.84
SSN3YPL042C DBF20P32328 564 aa9.8□□□□□ -0.84
SSN3YPL042C LDH1P38139 375 aa9.8□□□□□ -0.84
SSN3YPL042C MSG5P38590 489 aa9.8□□□□□ -0.84
SSN3YPL042C HIS2P38635 335 aa9.8□□□□□ -0.84
SSN3YPL042C ZAP1P47043 880 aa9.8□□□□□ -0.84
SSN3YPL042C GSF2Q04697 403 aaKnown RBP9.8□□□□□ -0.84
SSN3YPL042C GNT1Q12096 491 aa9.8□□□□□ -0.84
SSN3YPL042C SPS22P25380 463 aa9.79□□□□□ -0.84
SSN3YPL042C PEP7P32609 515 aa9.79□□□□□ -0.84
SSN3YPL042C SWH1P35845 1188 aa9.79□□□□□ -0.84
SSN3YPL042C DRE2P36152 348 aa9.79□□□□□ -0.84
SSN3YPL042C UBX7P38349 436 aa9.79□□□□□ -0.84
SSN3YPL042C RRD1P40454 393 aaKnown RBP9.79□□□□□ -0.84
SSN3YPL042C SNZ3P43545 298 aa9.79□□□□□ -0.84
SSN3YPL042C PRP31P49704 494 aaPredicted RBP9.79□□□□□ -0.84
SSN3YPL042C INP52P50942 1183 aa9.79□□□□□ -0.84
SSN3YPL042C SNZ2P53824 298 aa9.79□□□□□ -0.84
SSN3YPL042C AHC1Q12433 566 aa9.79□□□□□ -0.84
SSN3YPL042C AVL9Q12500 764 aa9.79□□□□□ -0.84
SSN3YPL042C CET1O13297 549 aaPredicted RBP9.78□□□□□ -0.84
SSN3YPL042C ERR1P0CX10 437 aa9.78□□□□□ -0.84
SSN3YPL042C ERR2P0CX11 437 aa9.78□□□□□ -0.84
SSN3YPL042C YER152CP10356 443 aa9.78□□□□□ -0.84
SSN3YPL042C NIP1P32497 812 aaKnown RBP9.78□□□□□ -0.84
SSN3YPL042C SSE1P32589 693 aaKnown RBP9.78□□□□□ -0.84
SSN3YPL042C NCL1P38205 684 aaKnown RBP9.78□□□□□ -0.84
SSN3YPL042C GCV2P49095 1034 aa9.78□□□□□ -0.84
SSN3YPL042C PUS2P53167 370 aa9.78□□□□□ -0.84
SSN3YPL042C YLR455WQ06188 304 aa9.78□□□□□ -0.84
SSN3YPL042C NUT2Q06213 157 aa9.78□□□□□ -0.84
SSN3YPL042C ATG23Q06671 453 aa9.78□□□□□ -0.84
SSN3YPL042C STE3P06783 470 aa9.77□□□□□ -0.84
SSN3YPL042C SFP1P32432 683 aa9.77□□□□□ -0.84
SSN3YPL042C UBS1P38290 277 aa9.77□□□□□ -0.84
SSN3YPL042C TDA3P38758 523 aa9.77□□□□□ -0.84
SSN3YPL042C YIL161WP40449 235 aaKnown RBP9.77□□□□□ -0.84
SSN3YPL042C BRO1P48582 844 aa9.77□□□□□ -0.84
SSN3YPL042C ALT1P52893 592 aa9.77□□□□□ -0.84
SSN3YPL042C CWC24P53769 259 aa9.77□□□□□ -0.84
SSN3YPL042C SNU56Q03782 492 aaKnown RBP9.77□□□□□ -0.84
SSN3YPL042C CTF3Q12748 733 aa9.77□□□□□ -0.84
SSN3YPL042C YDR524C-BQ3E6R4 66 aa9.77□□□□□ -0.84
SSN3YPL042C FUB1P25659 250 aa9.77□□□□□ -0.85
SSN3YPL042C MGM101P32787 269 aaKnown RBP9.77□□□□□ -0.85
SSN3YPL042C LHS1P36016 881 aa9.77□□□□□ -0.85
SSN3YPL042C POL12P38121 705 aaPredicted RBP9.77□□□□□ -0.85
SSN3YPL042C ALG3P38179 458 aa9.77□□□□□ -0.85
SSN3YPL042C RRT2P38332 387 aa9.77□□□□□ -0.85
SSN3YPL042C YHL026CP38740 315 aa9.77□□□□□ -0.85
SSN3YPL042C CCT4P39078 528 aaKnown RBP9.77□□□□□ -0.85
SSN3YPL042C LCP5P40079 357 aaPredicted RBP9.77□□□□□ -0.85
SSN3YPL042C MKT1P40850 830 aaKnown RBP9.77□□□□□ -0.85
SSN3YPL042C GYP8P43570 497 aa9.77□□□□□ -0.85
SSN3YPL042C SPO74P45819 413 aa9.77□□□□□ -0.85
SSN3YPL042C DPB4Q04603 196 aaKnown RBP9.77□□□□□ -0.85
SSN3YPL042C CDD1Q06549 142 aa9.77□□□□□ -0.85
SSN3YPL042C PUF3Q07807 879 aaKnown RBP RIP-Chip data9.77□□□□□ -0.85not detected
SSN3YPL042C NTG2Q08214 380 aa9.77□□□□□ -0.85
SSN3YPL042C YPR027CQ12079 277 aa9.77□□□□□ -0.85
SSN3YPL042C RMP1Q12530 201 aa9.77□□□□□ -0.85
SSN3YPL042C JIP3O13555 125 aa9.76□□□□□ -0.85
SSN3YPL042C YLR462WO13556 202 aa9.76□□□□□ -0.85
SSN3YPL042C BI2P03873 423 aa9.76□□□□□ -0.85
SSN3YPL042C BI4P03879 638 aa9.76□□□□□ -0.85
SSN3YPL042C RPO26P20435 155 aa9.76□□□□□ -0.85
SSN3YPL042C NPR1P22211 790 aa9.76□□□□□ -0.85
SSN3YPL042C POT1P27796 417 aaKnown RBP RIP-Chip data9.76□□□□□ -0.85not detected
SSN3YPL042C PTP2P29461 750 aa9.76□□□□□ -0.85
SSN3YPL042C YHL049CP38722 271 aa9.76□□□□□ -0.85
SSN3YPL042C YEL075CP39972 122 aa9.76□□□□□ -0.85
SSN3YPL042C YER189WP40104 122 aa9.76□□□□□ -0.85
SSN3YPL042C PHB1P40961 287 aa9.76□□□□□ -0.85
SSN3YPL042C YFL064CP43540 174 aa9.76□□□□□ -0.85
SSN3YPL042C ABM1P47146 123 aa9.76□□□□□ -0.85
SSN3YPL042C HLJ1P48353 224 aa9.76□□□□□ -0.85
SSN3YPL042C ALT2P52892 507 aa9.76□□□□□ -0.85
SSN3YPL042C RTN1Q04947 295 aaKnown RBP9.76□□□□□ -0.85
SSN3YPL042C ZRT2Q12436 422 aa9.76□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms