RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W ATG16Q03818 150 aa10.89□□□□□ -0.67
PRE6YOL038W COX5AP00424 153 aa10.88□□□□□ -0.67
PRE6YOL038W MPH2P0CD99 609 aa10.88□□□□□ -0.67
PRE6YOL038W MCM2P29469 868 aa10.88□□□□□ -0.67
PRE6YOL038W MPE1P35728 441 aaKnown RBP10.88□□□□□ -0.67
PRE6YOL038W IRS4P36115 615 aaKnown RBP10.88□□□□□ -0.67
PRE6YOL038W PPE1P38796 400 aa10.88□□□□□ -0.67
PRE6YOL038W FLC2P39719 783 aa10.88□□□□□ -0.67
PRE6YOL038W MKT1P40850 830 aaKnown RBP10.88□□□□□ -0.67
PRE6YOL038W RRN7P40992 514 aa10.88□□□□□ -0.67
PRE6YOL038W TIM13P53299 105 aa10.88□□□□□ -0.67
PRE6YOL038W GND2P53319 492 aa10.88□□□□□ -0.67
PRE6YOL038W IPI3P53877 555 aa10.88□□□□□ -0.67
PRE6YOL038W VAC7P53950 1165 aa10.88□□□□□ -0.67
PRE6YOL038W YAT1P80235 687 aa10.88□□□□□ -0.67
PRE6YOL038W MSH6Q03834 1242 aa10.88□□□□□ -0.67
PRE6YOL038W SOV1Q04748 898 aa10.88□□□□□ -0.67
PRE6YOL038W EAF1Q06337 982 aa10.88□□□□□ -0.67
PRE6YOL038W OPT2Q06593 877 aa10.88□□□□□ -0.67
PRE6YOL038W OPY2Q06810 360 aa10.88□□□□□ -0.67
PRE6YOL038W GFA1P14742 717 aaKnown RBP10.87□□□□□ -0.67
PRE6YOL038W MIH1P23748 554 aa10.87□□□□□ -0.67
PRE6YOL038W BLI1P35727 113 aa10.87□□□□□ -0.67
PRE6YOL038W PCH2P38126 564 aa10.87□□□□□ -0.67
PRE6YOL038W TAE1P38340 232 aa10.87□□□□□ -0.67
PRE6YOL038W PMC1P38929 1173 aaPredicted RBP10.87□□□□□ -0.67
PRE6YOL038W MVP1P40959 511 aaKnown RBP10.87□□□□□ -0.67
PRE6YOL038W SUM1P46676 1062 aa10.87□□□□□ -0.67
PRE6YOL038W GLG2P47011 380 aa10.87□□□□□ -0.67
PRE6YOL038W TCB2P48231 1178 aa10.87□□□□□ -0.67
PRE6YOL038W NBP35P52920 328 aa10.87□□□□□ -0.67
PRE6YOL038W REG1Q00816 1014 aa10.87□□□□□ -0.67
PRE6YOL038W CBC2Q08920 208 aaKnown RBP RIP-Chip data10.87□□□□□ -0.67not detected
PRE6YOL038W GNT1Q12096 491 aa10.87□□□□□ -0.67
PRE6YOL038W EFG1Q3E705 233 aaKnown RBP10.87□□□□□ -0.67
PRE6YOL038W SNF5P18480 905 aa10.86□□□□□ -0.67
PRE6YOL038W CHL1P22516 861 aaPredicted RBP10.86□□□□□ -0.67
PRE6YOL038W HXT1P32465 570 aa10.86□□□□□ -0.67
PRE6YOL038W YBL055CP34220 418 aaPredicted RBP10.86□□□□□ -0.67
PRE6YOL038W SAW1P39735 261 aa10.86□□□□□ -0.67
PRE6YOL038W RAD26P40352 1085 aa10.86□□□□□ -0.67
PRE6YOL038W RFX1P48743 811 aa10.86□□□□□ -0.67
PRE6YOL038W YDL073WQ07454 984 aa10.86□□□□□ -0.67
PRE6YOL038W CMS1Q07897 291 aaKnown RBP10.86□□□□□ -0.67
PRE6YOL038W DAS2Q12084 232 aa10.86□□□□□ -0.67
PRE6YOL038W MNN11P46985 422 aaKnown RBP10.85□□□□□ -0.67
PRE6YOL038W YTP1P53584 459 aa10.85□□□□□ -0.67
PRE6YOL038W NMA111P53920 997 aa10.85□□□□□ -0.67
PRE6YOL038W THI7Q05998 598 aa10.85□□□□□ -0.67
PRE6YOL038W YDL129WQ07555 291 aa10.85□□□□□ -0.67
PRE6YOL038W TPO1Q07824 586 aa10.85□□□□□ -0.67
PRE6YOL038W RTK1Q12100 620 aaPredicted RBP10.85□□□□□ -0.67
PRE6YOL038W YEL077CQ3E7X8 1277 aa10.85□□□□□ -0.67
PRE6YOL038W TRM1P15565 570 aaKnown RBP10.84□□□□□ -0.67
PRE6YOL038W LIP5P32875 414 aa10.84□□□□□ -0.67
PRE6YOL038W MIC60P36112 540 aa10.84□□□□□ -0.67
PRE6YOL038W OTU2P38747 307 aaKnown RBP10.84□□□□□ -0.67
PRE6YOL038W SET2P46995 733 aaKnown RBP10.84□□□□□ -0.67
PRE6YOL038W YJL132WP47014 750 aa10.84□□□□□ -0.67
PRE6YOL038W SUN4P53616 420 aa10.84□□□□□ -0.67
PRE6YOL038W YNL247WP53852 767 aaKnown RBP10.84□□□□□ -0.67
PRE6YOL038W JJJ1P53863 590 aa10.84□□□□□ -0.67
PRE6YOL038W VPS9P54787 451 aa10.84□□□□□ -0.67
PRE6YOL038W YPL113CQ02961 396 aa10.84□□□□□ -0.67
PRE6YOL038W NGL3Q03210 505 aa10.84□□□□□ -0.67
PRE6YOL038W UTP5Q04177 643 aaKnown RBP10.84□□□□□ -0.67
PRE6YOL038W YPR114WQ06107 315 aa10.84□□□□□ -0.67
PRE6YOL038W YFT2Q06676 274 aa10.84□□□□□ -0.67
PRE6YOL038W ATG10Q07879 167 aa10.84□□□□□ -0.67
PRE6YOL038W COX3P00420 269 aa10.83□□□□□ -0.68
PRE6YOL038W PDR1P12383 1068 aa10.83□□□□□ -0.68
PRE6YOL038W MRS6P32864 603 aaKnown RBP10.83□□□□□ -0.68
PRE6YOL038W LTP1P40347 161 aa10.83□□□□□ -0.68
PRE6YOL038W EFM4P40516 257 aa10.83□□□□□ -0.68
PRE6YOL038W YJR124CP47159 448 aa10.83□□□□□ -0.68
PRE6YOL038W SWS2P53937 143 aa10.83□□□□□ -0.68
PRE6YOL038W ARP9Q05123 467 aa10.83□□□□□ -0.68
PRE6YOL038W PUF3Q07807 879 aaKnown RBP RIP-Chip data10.83□□□□□ -0.68not detected
PRE6YOL038W SFI1Q12369 946 aa10.83□□□□□ -0.68
PRE6YOL038W MNE1P24720 663 aa10.82□□□□□ -0.68
PRE6YOL038W RBK1P25332 333 aa10.82□□□□□ -0.68
PRE6YOL038W TCD1P38756 429 aa10.82□□□□□ -0.68
PRE6YOL038W FAA3P39002 694 aa10.82□□□□□ -0.68
PRE6YOL038W ARG2P40360 574 aa10.82□□□□□ -0.68
PRE6YOL038W RPL34BP40525 121 aaKnown RBP10.82□□□□□ -0.68
PRE6YOL038W KAP114P53067 1004 aa10.82□□□□□ -0.68
PRE6YOL038W VPS38Q05919 439 aa10.82□□□□□ -0.68
PRE6YOL038W TRE2Q08693 809 aa10.82□□□□□ -0.68
PRE6YOL038W SEY1Q99287 776 aa10.82□□□□□ -0.68
PRE6YOL038W YLR462WO13556 202 aa10.81□□□□□ -0.68
PRE6YOL038W SCH9P11792 824 aaKnown RBP10.81□□□□□ -0.68
PRE6YOL038W PMA2P19657 947 aa10.81□□□□□ -0.68
PRE6YOL038W BRF1P29056 596 aa10.81□□□□□ -0.68
PRE6YOL038W SCD5P34758 872 aa10.81□□□□□ -0.68
PRE6YOL038W TGL4P36165 910 aa10.81□□□□□ -0.68
PRE6YOL038W PCA1P38360 1216 aa10.81□□□□□ -0.68
PRE6YOL038W YHL049CP38722 271 aa10.81□□□□□ -0.68
PRE6YOL038W LCP5P40079 357 aaPredicted RBP10.81□□□□□ -0.68
PRE6YOL038W ELO3P40319 345 aa10.81□□□□□ -0.68
PRE6YOL038W YJL070CP40361 888 aa10.81□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms