RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W MUD1P32605 298 aaKnown RBP5.69□□□□□ -1.5
CBF1YJR060W YKR078WP36158 585 aaKnown RBP5.69□□□□□ -1.5
CBF1YJR060W ADE17P38009 592 aaKnown RBP5.69□□□□□ -1.5
CBF1YJR060W TSL1P38427 1098 aaKnown RBP5.69□□□□□ -1.5
CBF1YJR060W CKB2P38930 258 aa5.69□□□□□ -1.5
CBF1YJR060W SAD1P43589 448 aa5.69□□□□□ -1.5
CBF1YJR060W YJR096WP47137 282 aa5.69□□□□□ -1.5
CBF1YJR060W CWC21Q03375 135 aaKnown RBP5.69□□□□□ -1.5
CBF1YJR060W SIZ1Q04195 904 aa5.69□□□□□ -1.5
CBF1YJR060W MLH2Q07980 695 aa5.69□□□□□ -1.5
CBF1YJR060W DNL4Q08387 944 aaPredicted RBP5.69□□□□□ -1.5
CBF1YJR060W AFT2Q08957 416 aa5.69□□□□□ -1.5
CBF1YJR060W NAT1P12945 854 aaKnown RBP5.68□□□□□ -1.5
CBF1YJR060W HOG1P32485 435 aa5.68□□□□□ -1.5
CBF1YJR060W MRPL7P36519 292 aa5.68□□□□□ -1.5
CBF1YJR060W PCM1P38628 557 aaKnown RBP5.68□□□□□ -1.5
CBF1YJR060W YHL026CP38740 315 aa5.68□□□□□ -1.5
CBF1YJR060W GIC1P38785 314 aa5.68□□□□□ -1.5
CBF1YJR060W BUD16P39988 312 aa5.68□□□□□ -1.5
CBF1YJR060W YER158CP40095 573 aa5.68□□□□□ -1.5
CBF1YJR060W AIP1P46680 615 aaKnown RBP5.68□□□□□ -1.5
CBF1YJR060W ORC5P50874 479 aa5.68□□□□□ -1.5
CBF1YJR060W TIM8P57744 87 aa5.68□□□□□ -1.5
CBF1YJR060W SNP1Q00916 300 aaPredicted RBP5.68□□□□□ -1.5
CBF1YJR060W CEF1Q03654 590 aaPredicted RBP5.68□□□□□ -1.5
CBF1YJR060W PLB2Q03674 706 aa5.68□□□□□ -1.5
CBF1YJR060W SHS1Q07657 551 aa5.68□□□□□ -1.5
CBF1YJR060W XYL2Q07993 356 aa5.68□□□□□ -1.5
CBF1YJR060W YAP7Q08182 245 aa5.68□□□□□ -1.5
CBF1YJR060W YPL216WQ08964 1102 aa5.68□□□□□ -1.5
CBF1YJR060W YTM1Q12024 460 aaPredicted RBP5.68□□□□□ -1.5
CBF1YJR060W COX4P04037 155 aa5.67□□□□□ -1.5
CBF1YJR060W RPS13P05756 151 aaKnown RBP5.67□□□□□ -1.5
CBF1YJR060W CDC37P06101 506 aaKnown RBP5.67□□□□□ -1.5
CBF1YJR060W POL3P15436 1097 aa5.67□□□□□ -1.5
CBF1YJR060W DAL7P21826 554 aa5.67□□□□□ -1.5
CBF1YJR060W PSO2P30620 661 aa5.67□□□□□ -1.5
CBF1YJR060W FUN30P31380 1131 aa5.67□□□□□ -1.5
CBF1YJR060W APN2P38207 520 aa5.67□□□□□ -1.5
CBF1YJR060W RKM3P38222 552 aa5.67□□□□□ -1.5
CBF1YJR060W SLX1P38324 304 aa5.67□□□□□ -1.5
CBF1YJR060W EFM2P38347 419 aa5.67□□□□□ -1.5
CBF1YJR060W CTM1P38818 585 aa5.67□□□□□ -1.5
CBF1YJR060W NAB3P38996 802 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
CBF1YJR060W MEF2P39677 819 aa5.67□□□□□ -1.5
CBF1YJR060W UBP5P39944 805 aa5.67□□□□□ -1.5
CBF1YJR060W FTR1P40088 404 aa5.67□□□□□ -1.5
CBF1YJR060W LCB2P40970 561 aa5.67□□□□□ -1.5
CBF1YJR060W TY4A-JP47023 414 aa5.67□□□□□ -1.5
CBF1YJR060W RIM8P53179 542 aa5.67□□□□□ -1.5
CBF1YJR060W ALG11P53954 548 aaKnown RBP5.67□□□□□ -1.5
CBF1YJR060W GIR2Q03768 265 aaPredicted RBP5.67□□□□□ -1.5
CBF1YJR060W YPR196WQ06595 470 aa5.67□□□□□ -1.5
CBF1YJR060W REH1Q06709 432 aa5.67□□□□□ -1.5
CBF1YJR060W MPD2Q99316 277 aa5.67□□□□□ -1.5
CBF1YJR060W SOD2P00447 233 aa5.66□□□□□ -1.5
CBF1YJR060W ADE4P04046 510 aaKnown RBP5.66□□□□□ -1.5
CBF1YJR060W MPH2P0CD99 609 aa5.66□□□□□ -1.5
CBF1YJR060W ENA1P13587 1091 aa5.66□□□□□ -1.5
CBF1YJR060W PRP6P19735 899 aaPredicted RBP5.66□□□□□ -1.5
CBF1YJR060W CAD1P24813 409 aaKnown RBP5.66□□□□□ -1.5
CBF1YJR060W PLC1P32383 869 aa5.66□□□□□ -1.5
CBF1YJR060W HEL1P36113 551 aa5.66□□□□□ -1.5
CBF1YJR060W MRPL10P36520 322 aa5.66□□□□□ -1.5
CBF1YJR060W FUI1P38196 639 aa5.66□□□□□ -1.5
CBF1YJR060W YHR054CP38780 354 aa5.66□□□□□ -1.5
CBF1YJR060W YHR202WP38887 602 aa5.66□□□□□ -1.5
CBF1YJR060W DOT6P40059 670 aaKnown RBP5.66□□□□□ -1.5
CBF1YJR060W TFG2P41896 400 aaPredicted RBP5.66□□□□□ -1.5
CBF1YJR060W HSH155P49955 971 aaKnown RBP5.66□□□□□ -1.5
CBF1YJR060W AIM14P53109 570 aa5.66□□□□□ -1.5
CBF1YJR060W GTF1P53260 183 aaPredicted RBP5.66□□□□□ -1.5
CBF1YJR060W PBP1P53297 722 aaKnown RBP5.66□□□□□ -1.5
CBF1YJR060W NOP13P53883 403 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
CBF1YJR060W ENA2Q01896 1091 aa5.66□□□□□ -1.5
CBF1YJR060W GCN5Q03330 439 aa5.66□□□□□ -1.5
CBF1YJR060W YLR455WQ06188 304 aa5.66□□□□□ -1.5
CBF1YJR060W ATG33Q06485 197 aa5.66□□□□□ -1.5
CBF1YJR060W GUP2Q08929 609 aa5.66□□□□□ -1.5
CBF1YJR060W SGT2Q12118 346 aaKnown RBP5.66□□□□□ -1.5
CBF1YJR060W YOR022CQ12204 715 aa5.66□□□□□ -1.5
CBF1YJR060W ZPS1Q12512 249 aa5.66□□□□□ -1.5
CBF1YJR060W ENA5Q12691 1091 aa5.66□□□□□ -1.5
CBF1YJR060W AEP2P22136 580 aa5.65□□□□□ -1.5
CBF1YJR060W TRX2P22803 104 aaKnown RBP5.65□□□□□ -1.5
CBF1YJR060W CYS3P31373 394 aaKnown RBP5.65□□□□□ -1.5
CBF1YJR060W SWI3P32591 825 aa5.65□□□□□ -1.5
CBF1YJR060W CSE2P33308 149 aa5.65□□□□□ -1.5
CBF1YJR060W OAF1P39720 1047 aaPredicted RBP5.65□□□□□ -1.5
CBF1YJR060W ZRG8P40021 1076 aa5.65□□□□□ -1.5
CBF1YJR060W YER186CP40101 306 aa5.65□□□□□ -1.5
CBF1YJR060W OPT1P40897 799 aa5.65□□□□□ -1.5
CBF1YJR060W GZF3P42944 551 aaKnown RBP5.65□□□□□ -1.5
CBF1YJR060W DUG1P43616 481 aaKnown RBP5.65□□□□□ -1.5
CBF1YJR060W BFA1P47113 574 aa5.65□□□□□ -1.5
CBF1YJR060W SPT20P50875 604 aa5.65□□□□□ -1.5
CBF1YJR060W YNL034WP53963 612 aa5.65□□□□□ -1.5
CBF1YJR060W YNL018CP53976 612 aa5.65□□□□□ -1.5
CBF1YJR060W TGL2P54857 326 aa5.65□□□□□ -1.5
CBF1YJR060W RPA49Q01080 415 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms