RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	UME1	Q03010	460 aa		4.13	□□□□□ -1.75
SHE9	YDR393W	ERV46	P39727	415 aa		4.12	□□□□□ -1.75
SHE9	YDR393W	SAP1	P39955	897 aa	Known RBP	4.12	□□□□□ -1.75
SHE9	YDR393W	MAM1	P40065	302 aa		4.12	□□□□□ -1.75
SHE9	YDR393W	NOP2	P40991	618 aa	Known RBP	4.12	□□□□□ -1.75
SHE9	YDR393W	GPP1	P41277	250 aa	Known RBP	4.12	□□□□□ -1.75
SHE9	YDR393W	IRC5	P43610	853 aa		4.12	□□□□□ -1.75
SHE9	YDR393W	COS12	P53053	380 aa		4.12	□□□□□ -1.75
SHE9	YDR393W	PLM2	Q04383	521 aa		4.12	□□□□□ -1.75
SHE9	YDR393W	YOR389W	Q08912	624 aa		4.12	□□□□□ -1.75
SHE9	YDR393W	VPS5	Q92331	675 aa		4.12	□□□□□ -1.75
SHE9	YDR393W	PPG1	P32838	368 aa		4.11	□□□□□ -1.75
SHE9	YDR393W	SCO2	P38072	301 aa		4.11	□□□□□ -1.75
SHE9	YDR393W	SRP68	P38687	599 aa	Known RBP	4.11	□□□□□ -1.75
SHE9	YDR393W	RRP8	P38961	392 aa	Known RBP	4.11	□□□□□ -1.75
SHE9	YDR393W	MDR1	P53258	950 aa		4.11	□□□□□ -1.75
SHE9	YDR393W	RNH70	P53331	553 aa		4.11	□□□□□ -1.75
SHE9	YDR393W	SEC18	P18759	758 aa	Known RBP	4.1	□□□□□ -1.75
SHE9	YDR393W	ARG1	P22768	420 aa		4.1	□□□□□ -1.75
SHE9	YDR393W	MET30	P39014	640 aa		4.1	□□□□□ -1.75
SHE9	YDR393W	RAD26	P40352	1085 aa		4.1	□□□□□ -1.75
SHE9	YDR393W	YGL260W	P53056	76 aa		4.1	□□□□□ -1.75
SHE9	YDR393W	AAT1	Q01802	451 aa		4.1	□□□□□ -1.75
SHE9	YDR393W	PMT3	P47190	753 aa		4.09	□□□□□ -1.75
SHE9	YDR393W	MNT2	P53059	558 aa		4.09	□□□□□ -1.75
SHE9	YDR393W	CNA1	P23287	553 aa		4.08	□□□□□ -1.76
SHE9	YDR393W	RTT107	P38850	1070 aa		4.08	□□□□□ -1.76
SHE9	YDR393W	YIL169C	P40442	995 aa		4.08	□□□□□ -1.76
SHE9	YDR393W	YPT11	P48559	417 aa		4.08	□□□□□ -1.76
SHE9	YDR393W	YML053C	Q04978	212 aa		4.08	□□□□□ -1.76
SHE9	YDR393W	YOR378W	Q08902	515 aa		4.08	□□□□□ -1.76
SHE9	YDR393W	RRI1	Q12468	440 aa		4.08	□□□□□ -1.76
SHE9	YDR393W	NUP145	P49687	1317 aa		4.08	□□□□□ -1.76
SHE9	YDR393W	YFL068W	P0CX99	160 aa		4.07	□□□□□ -1.76
SHE9	YDR393W	YLL066W-A	P0CY00	160 aa		4.07	□□□□□ -1.76
SHE9	YDR393W	YLL067W-A	P0CY01	160 aa		4.07	□□□□□ -1.76
SHE9	YDR393W	DAL3	P32459	195 aa		4.07	□□□□□ -1.76
SHE9	YDR393W	STB5	P38699	743 aa		4.07	□□□□□ -1.76
SHE9	YDR393W	PEA2	P40091	420 aa		4.07	□□□□□ -1.76
SHE9	YDR393W	ACS1	Q01574	713 aa		4.07	□□□□□ -1.76
SHE9	YDR393W	YDL242W	Q07746	117 aa		4.07	□□□□□ -1.76
SHE9	YDR393W	UTP14	Q04500	899 aa	Known RBP	4.06	□□□□□ -1.76
SHE9	YDR393W	YPR027C	Q12079	277 aa		4.06	□□□□□ -1.76
SHE9	YDR393W	URA3	P03962	267 aa		4.05	□□□□□ -1.76
SHE9	YDR393W	SES1	P07284	462 aa	Known RBP	4.05	□□□□□ -1.76
SHE9	YDR393W	ARO9	P38840	513 aa	Predicted RBP	4.05	□□□□□ -1.76
SHE9	YDR393W	YJL107C	P42947	387 aa		4.05	□□□□□ -1.76
SHE9	YDR393W	YMR317W	Q04893	1140 aa		4.05	□□□□□ -1.76
SHE9	YDR393W	ECM22	Q05958	814 aa	Predicted RBP	4.05	□□□□□ -1.76
SHE9	YDR393W	UBP7	P40453	1071 aa		4.04	□□□□□ -1.76
SHE9	YDR393W	HOS2	P53096	452 aa	Predicted RBP	4.04	□□□□□ -1.76
SHE9	YDR393W	RTT103	Q05543	409 aa		4.04	□□□□□ -1.76
SHE9	YDR393W	KGD2	P19262	463 aa	Predicted RBP	4.03	□□□□□ -1.76
SHE9	YDR393W	FMP46	P36141	133 aa	Known RBP	4.03	□□□□□ -1.76
SHE9	YDR393W	YNR029C	P53729	429 aa	Known RBP	4.03	□□□□□ -1.76
SHE9	YDR393W	YAT1	P80235	687 aa		4.03	□□□□□ -1.76
SHE9	YDR393W	SKY1	Q03656	742 aa		4.03	□□□□□ -1.76
SHE9	YDR393W	GSH2	Q08220	491 aa		4.03	□□□□□ -1.76
SHE9	YDR393W	YMR230W-A	Q3E7B5	62 aa		4.03	□□□□□ -1.76
SHE9	YDR393W	RPL42A	P0CX27	106 aa	Known RBP	4.02	□□□□□ -1.77
SHE9	YDR393W	RPL42B	P0CX28	106 aa	Known RBP	4.02	□□□□□ -1.77
SHE9	YDR393W	GSH1	P32477	678 aa		4.02	□□□□□ -1.77
SHE9	YDR393W	EAF5	P39995	279 aa		4.02	□□□□□ -1.77
SHE9	YDR393W	ORC5	P50874	479 aa		4.02	□□□□□ -1.77
SHE9	YDR393W	YNL144C	P53907	740 aa		4.02	□□□□□ -1.77
SHE9	YDR393W	ECM16	Q04217	1267 aa	Known RBP	4.02	□□□□□ -1.77
SHE9	YDR393W	FAP7	Q12055	197 aa	Predicted RBP	4.02	□□□□□ -1.77
SHE9	YDR393W	RTK1	Q12100	620 aa	Predicted RBP	4.02	□□□□□ -1.77
SHE9	YDR393W	YER175W-A	Q8TGU4	54 aa		4.02	□□□□□ -1.77
SHE9	YDR393W	PRP45	P28004	379 aa	Predicted RBP	4.02	□□□□□ -1.77
SHE9	YDR393W	BET4	Q00618	327 aa		4.02	□□□□□ -1.77
SHE9	YDR393W	DIG1	Q03063	452 aa	Known RBP	4.02	□□□□□ -1.77
SHE9	YDR393W	CWC2	Q12046	339 aa	Predicted RBP	4.02	□□□□□ -1.77
SHE9	YDR393W	YCR061W	P25639	631 aa		4.01	□□□□□ -1.77
SHE9	YDR393W	YOX1	P34161	385 aa		4.01	□□□□□ -1.77
SHE9	YDR393W	SDS24	P38314	527 aa		4.01	□□□□□ -1.77
SHE9	YDR393W	ARN1	P38731	627 aa		4.01	□□□□□ -1.77
SHE9	YDR393W	LNP1	P38878	278 aa		4.01	□□□□□ -1.77
SHE9	YDR393W	GPP2	P40106	250 aa	Known RBP	4.01	□□□□□ -1.77
SHE9	YDR393W	MAD2	P40958	196 aa		4.01	□□□□□ -1.77
SHE9	YDR393W	SAD1	P43589	448 aa		4.01	□□□□□ -1.77
SHE9	YDR393W	IDS2	P46958	469 aa		4.01	□□□□□ -1.77
SHE9	YDR393W	YNR071C	P53757	342 aa		4.01	□□□□□ -1.77
SHE9	YDR393W	HOS1	Q12214	470 aa		4.01	□□□□□ -1.77
SHE9	YDR393W	PPZ1	P26570	692 aa		4	□□□□□ -1.77
SHE9	YDR393W	VBA2	P38358	474 aa	Known RBP	4	□□□□□ -1.77
SHE9	YDR393W	YND1	P40009	630 aa		4	□□□□□ -1.77
SHE9	YDR393W	VRG4	P40107	337 aa		4	□□□□□ -1.77
SHE9	YDR393W	GSM1	P42950	618 aa		4	□□□□□ -1.77
SHE9	YDR393W	DIN7	Q12086	430 aa		4	□□□□□ -1.77
SHE9	YDR393W	RMP1	Q12530	201 aa		4	□□□□□ -1.77
SHE9	YDR393W	PET309	P32522	965 aa	Predicted RBP	3.99	□□□□□ -1.77
SHE9	YDR393W	NIC96	P34077	839 aa		3.99	□□□□□ -1.77
SHE9	YDR393W	YJR142W	P47173	342 aa		3.99	□□□□□ -1.77
SHE9	YDR393W	YGR237C	P50089	785 aa		3.99	□□□□□ -1.77
SHE9	YDR393W	YPL191C	Q08930	360 aa		3.99	□□□□□ -1.77
SHE9	YDR393W	PRE2	P30656	287 aa	Known RBP	3.98	□□□□□ -1.77
SHE9	YDR393W	SKP2	P42843	763 aa		3.98	□□□□□ -1.77
SHE9	YDR393W	DUG1	P43616	481 aa	Known RBP	3.97	□□□□□ -1.77
SHE9	YDR393W	ILV2	P07342	687 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms