RNA–Protein interactions for RNA: YCR067C

SED4, Transcript of Integral ER membrane protein that stimulates Sar1p GTPase activity, yeast

Gene SED4, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SED4	YCR067C	POL4	P25615	582 aa		5.09	□□□□□ -1.59
SED4	YCR067C	YCR015C	P25616	317 aa		5.09	□□□□□ -1.59
SED4	YCR067C	SEC1	P30619	724 aa	Known RBP	5.09	□□□□□ -1.59
SED4	YCR067C	RRN6	P32786	894 aa		5.09	□□□□□ -1.59
SED4	YCR067C	MDJ1	P35191	511 aa		5.09	□□□□□ -1.59
SED4	YCR067C	YBR139W	P38109	508 aa		5.09	□□□□□ -1.59
SED4	YCR067C	SAW1	P39735	261 aa		5.09	□□□□□ -1.59
SED4	YCR067C	RGD2	P43556	714 aa		5.09	□□□□□ -1.59
SED4	YCR067C	LSG1	P53145	640 aa	Known RBP	5.09	□□□□□ -1.59
SED4	YCR067C	GET1	P53192	235 aa		5.09	□□□□□ -1.59
SED4	YCR067C	PUS6	P53294	404 aa		5.09	□□□□□ -1.59
SED4	YCR067C	NAN1	Q02931	896 aa	Known RBP	5.09	□□□□□ -1.59
SED4	YCR067C	FAR10	Q06001	478 aa		5.09	□□□□□ -1.59
SED4	YCR067C	SEC10	Q06245	871 aa		5.09	□□□□□ -1.59
SED4	YCR067C	TPK3	P05986	398 aa		5.09	□□□□□ -1.59
SED4	YCR067C	GPA2	P10823	449 aa		5.09	□□□□□ -1.59
SED4	YCR067C	SAM2	P19358	384 aa	Known RBP	5.09	□□□□□ -1.59
SED4	YCR067C	VPS3	P23643	1011 aa		5.09	□□□□□ -1.59
SED4	YCR067C	HEM3	P28789	327 aa		5.09	□□□□□ -1.59
SED4	YCR067C	BCS1	P32839	456 aa		5.09	□□□□□ -1.59
SED4	YCR067C	ECM10	P39987	644 aa		5.09	□□□□□ -1.59
SED4	YCR067C	MET18	P40469	1032 aa		5.09	□□□□□ -1.59
SED4	YCR067C	SNZ3	P43545	298 aa		5.09	□□□□□ -1.59
SED4	YCR067C	ALY2	P47029	1046 aa		5.09	□□□□□ -1.59
SED4	YCR067C	SNZ2	P53824	298 aa		5.09	□□□□□ -1.59
SED4	YCR067C	ROD1	Q02805	837 aa		5.09	□□□□□ -1.59
SED4	YCR067C	ERO1	Q03103	563 aa		5.09	□□□□□ -1.59
SED4	YCR067C	YET2	Q04210	160 aa		5.09	□□□□□ -1.59
SED4	YCR067C	ACK1	Q07622	623 aa	Predicted RBP	5.09	□□□□□ -1.59
SED4	YCR067C	FMP45	Q07651	309 aa		5.09	□□□□□ -1.59
SED4	YCR067C	NTG2	Q08214	380 aa		5.09	□□□□□ -1.59
SED4	YCR067C	CMR1	Q12510	522 aa	Known RBP	5.09	□□□□□ -1.59
SED4	YCR067C	HSF1	P10961	833 aa		5.08	□□□□□ -1.6
SED4	YCR067C	VMA1	P17255	1071 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	SPB1	P25582	841 aa	Predicted RBP	5.08	□□□□□ -1.6
SED4	YCR067C	RIM1	P32445	135 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	APE2	P32454	952 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	HSP78	P33416	811 aa		5.08	□□□□□ -1.6
SED4	YCR067C	WHI3	P34761	661 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	STV1	P37296	890 aa		5.08	□□□□□ -1.6
SED4	YCR067C	RDH54	P38086	958 aa		5.08	□□□□□ -1.6
SED4	YCR067C	SWC5	P38326	303 aa		5.08	□□□□□ -1.6
SED4	YCR067C	SSZ1	P38788	538 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	KRE29	P40026	464 aa		5.08	□□□□□ -1.6
SED4	YCR067C	VHR2	P40041	505 aa		5.08	□□□□□ -1.6
SED4	YCR067C	SER33	P40510	469 aa		5.08	□□□□□ -1.6
SED4	YCR067C	TIM11	P81449	96 aa	Predicted RBP	5.08	□□□□□ -1.6
SED4	YCR067C	MGR3	Q04472	501 aa		5.08	□□□□□ -1.6
SED4	YCR067C	RAP1	P11938	827 aa		5.08	□□□□□ -1.6
SED4	YCR067C	MRP13	P12686	339 aa		5.08	□□□□□ -1.6
SED4	YCR067C	PUT4	P15380	627 aa		5.08	□□□□□ -1.6
SED4	YCR067C	URE2	P23202	354 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	BUD31	P25337	157 aa	Predicted RBP	5.08	□□□□□ -1.6
SED4	YCR067C	RPS5	P26783	225 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	MEF2	P39677	819 aa		5.08	□□□□□ -1.6
SED4	YCR067C	RPH1	P39956	796 aa		5.08	□□□□□ -1.6
SED4	YCR067C	IMA1	P53051	589 aa		5.08	□□□□□ -1.6
SED4	YCR067C	PFA5	Q03289	374 aa		5.08	□□□□□ -1.6
SED4	YCR067C	YPR196W	Q06595	470 aa		5.08	□□□□□ -1.6
SED4	YCR067C	UTP4	Q06679	776 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	YDL121C	Q07541	149 aa		5.08	□□□□□ -1.6
SED4	YCR067C	LAM6	Q08001	693 aa		5.08	□□□□□ -1.6
SED4	YCR067C	TY1B-A	O13527	1196 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	SEM1	O94742	89 aa		5.08	□□□□□ -1.6
SED4	YCR067C	KGD1	P20967	1014 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	CTR86	P25355	563 aa		5.08	□□□□□ -1.6
SED4	YCR067C	CCR4	P31384	837 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	GDH2	P33327	1092 aa	Known RBP	5.08	□□□□□ -1.6
SED4	YCR067C	YBR138C	P38277	524 aa		5.08	□□□□□ -1.6
SED4	YCR067C	PIK1	P39104	1066 aa		5.08	□□□□□ -1.6
SED4	YCR067C	FLC2	P39719	783 aa		5.08	□□□□□ -1.6
SED4	YCR067C	HPM1	P40481	377 aa		5.08	□□□□□ -1.6
SED4	YCR067C	YRB2	P40517	327 aa		5.08	□□□□□ -1.6
SED4	YCR067C	FAR3	P46671	204 aa		5.08	□□□□□ -1.6
SED4	YCR067C	CLD1	P53264	445 aa		5.08	□□□□□ -1.6
SED4	YCR067C	ECM9	Q02202	377 aa		5.08	□□□□□ -1.6
SED4	YCR067C	DYN3	Q04949	312 aa		5.08	□□□□□ -1.6
SED4	YCR067C	SYO1	Q07395	620 aa		5.08	□□□□□ -1.6
SED4	YCR067C	THI20	Q08224	551 aa		5.08	□□□□□ -1.6
SED4	YCR067C	YPL119C-A	Q3E751	87 aa		5.08	□□□□□ -1.6
SED4	YCR067C	NHA1	Q99271	985 aa		5.08	□□□□□ -1.6
SED4	YCR067C	RSR1	P13856	272 aa		5.07	□□□□□ -1.6
SED4	YCR067C	PMA2	P19657	947 aa		5.07	□□□□□ -1.6
SED4	YCR067C	PHO89	P38361	574 aa		5.07	□□□□□ -1.6
SED4	YCR067C	UTP7	P40055	554 aa	Known RBP	5.07	□□□□□ -1.6
SED4	YCR067C	CCT7	P42943	550 aa	Known RBP	5.07	□□□□□ -1.6
SED4	YCR067C	HST2	P53686	357 aa		5.07	□□□□□ -1.6
SED4	YCR067C	YMR099C	Q03161	297 aa	Known RBP	5.07	□□□□□ -1.6
SED4	YCR067C	ENT4	Q07872	247 aa		5.07	□□□□□ -1.6
SED4	YCR067C	MAM3	Q12296	706 aa		5.07	□□□□□ -1.6
SED4	YCR067C	EMP46	Q12396	444 aa		5.07	□□□□□ -1.6
SED4	YCR067C	CAR1	P00812	333 aa	Known RBP	5.07	□□□□□ -1.6
SED4	YCR067C	MF(ALPHA)1	P01149	165 aa		5.07	□□□□□ -1.6
SED4	YCR067C	MSS18	P08593	268 aa		5.07	□□□□□ -1.6
SED4	YCR067C	PMI40	P29952	429 aa	Known RBP	5.07	□□□□□ -1.6
SED4	YCR067C	COT1	P32798	439 aa		5.07	□□□□□ -1.6
SED4	YCR067C	CYM1	P32898	989 aa		5.07	□□□□□ -1.6
SED4	YCR067C	YMC2	P38087	329 aa		5.07	□□□□□ -1.6
SED4	YCR067C	ATG12	P38316	186 aa		5.07	□□□□□ -1.6
SED4	YCR067C	YBR242W	P38331	238 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms