RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 WDHD1O75717 1129 aaPredicted RBP20.67■□□□□ 0.9
PHGDH-232ENST00000641947 MCM4P33991 863 aa20.67■□□□□ 0.9
PHGDH-232ENST00000641947 CDC42EP5Q6NZY7 148 aa20.67■□□□□ 0.9
PHGDH-232ENST00000641947 IARSP41252 1262 aaKnown RBP20.67■□□□□ 0.9
PHGDH-232ENST00000641947 LIFRP42702 1097 aa20.67■□□□□ 0.9
PHGDH-232ENST00000641947 SEC23AQ15436 765 aa20.67■□□□□ 0.9
PHGDH-232ENST00000641947 APOA5Q6Q788 366 aa20.67■□□□□ 0.9
PHGDH-232ENST00000641947 CLEC17AQ6ZS10 378 aa20.67■□□□□ 0.9
PHGDH-232ENST00000641947 ESR2Q92731 530 aa20.67■□□□□ 0.9
PHGDH-232ENST00000641947 RANBP6O60518 1105 aaKnown RBP20.66■□□□□ 0.9
PHGDH-232ENST00000641947 RAD17O75943 681 aa20.66■□□□□ 0.9
PHGDH-232ENST00000641947 PCP11498 1178 aaKnown RBP20.66■□□□□ 0.9
PHGDH-232ENST00000641947 RXRAP19793 462 aa20.66■□□□□ 0.9
PHGDH-232ENST00000641947 SLC44A5Q8NCS7 719 aa20.66■□□□□ 0.9
PHGDH-232ENST00000641947 ZDHHC15Q96MV8 337 aa20.66■□□□□ 0.9
PHGDH-232ENST00000641947 MYL10Q9BUA6 226 aa20.66■□□□□ 0.9
PHGDH-232ENST00000641947 BCS1LQ9Y276 419 aa20.66■□□□□ 0.9
PHGDH-232ENST00000641947 PSMD14O00487 310 aa20.65■□□□□ 0.9
PHGDH-232ENST00000641947 STX6O43752 255 aa20.65■□□□□ 0.9
PHGDH-232ENST00000641947 PPFIA3O75145 1194 aa20.65■□□□□ 0.9
PHGDH-232ENST00000641947 BAG4O95429 457 aaKnown RBP20.65■□□□□ 0.9
PHGDH-232ENST00000641947 DDX11Q96FC9 970 aa20.65■□□□□ 0.9
PHGDH-232ENST00000641947 USP40Q9NVE5 1235 aa20.65■□□□□ 0.9
PHGDH-232ENST00000641947 MYH15Q9Y2K3 1946 aa20.65■□□□□ 0.9
PHGDH-232ENST00000641947 TNKSO95271 1327 aa20.65■□□□□ 0.9
PHGDH-232ENST00000641947 PTPDC1A2A3K4 754 aa20.64■□□□□ 0.9
PHGDH-232ENST00000641947 PICALMQ13492 652 aa20.64■□□□□ 0.9
PHGDH-232ENST00000641947 FAM47AQ5JRC9 791 aa20.64■□□□□ 0.9
PHGDH-232ENST00000641947 ENAHQ8N8S7 591 aaPredicted RBP20.64■□□□□ 0.9
PHGDH-232ENST00000641947 LLPHQ9BRT6 129 aaKnown RBP20.64■□□□□ 0.9
PHGDH-232ENST00000641947 MRIQ9BWK5 157 aa20.64■□□□□ 0.9
PHGDH-232ENST00000641947 VPS33BQ9H267 617 aa20.64■□□□□ 0.9
PHGDH-232ENST00000641947 TAOK3Q9H2K8 898 aa20.64■□□□□ 0.9
PHGDH-232ENST00000641947 MTMR6Q9Y217 621 aa20.64■□□□□ 0.9
PHGDH-232ENST00000641947 MYH6P13533 1939 aa20.64■□□□□ 0.89
PHGDH-232ENST00000641947 NMT2O60551 498 aa20.64■□□□□ 0.89
PHGDH-232ENST00000641947 NFIAQ12857 509 aa20.64■□□□□ 0.89
PHGDH-232ENST00000641947 WTAPQ15007 396 aa20.64■□□□□ 0.89
PHGDH-232ENST00000641947 MTA3Q9BTC8 594 aa20.64■□□□□ 0.89
PHGDH-232ENST00000641947 WDR33Q9C0J8 1336 aaKnown RBP20.63■□□□□ 0.89
PHGDH-232ENST00000641947 POLR3DP05423 398 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-232ENST00000641947 VIL1P09327 827 aaKnown RBP20.63■□□□□ 0.89
PHGDH-232ENST00000641947 PRELPP51888 382 aa20.63■□□□□ 0.89
PHGDH-232ENST00000641947 HDLBPQ00341 1268 aaKnown RBP20.63■□□□□ 0.89
PHGDH-232ENST00000641947 PDE4BQ07343 736 aa20.63■□□□□ 0.89
PHGDH-232ENST00000641947 RSBN1LQ6PCB5 846 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-232ENST00000641947 MICU3Q86XE3 530 aa20.63■□□□□ 0.89
PHGDH-232ENST00000641947 ZSCAN10Q96SZ4 725 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-232ENST00000641947 GMLQ99445 158 aa20.63■□□□□ 0.89
PHGDH-232ENST00000641947 FAM217BQ9NTX9 383 aaPredicted RBP20.63■□□□□ 0.89
PHGDH-232ENST00000641947 SLC3A2P08195 630 aaKnown RBP20.62■□□□□ 0.89
PHGDH-232ENST00000641947 ZSCAN22P10073 491 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-232ENST00000641947 CDC27P30260 824 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 CACNB3P54284 484 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 NFXL1Q6ZNB6 911 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 ILDR2Q71H61 639 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 CCDC144CPQ8IYA2 1237 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 UBAC1Q9BSL1 405 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 SERPINA10Q9UK55 444 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 ZNRF3Q9ULT6 936 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 NID2Q14112 1375 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 FDPSP14324 419 aaKnown RBP20.62■□□□□ 0.89
PHGDH-232ENST00000641947 RASSF7Q02833 373 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 LARP1BQ659C4 914 aaKnown RBP20.62■□□□□ 0.89
PHGDH-232ENST00000641947 CDC37L1Q7L3B6 337 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 NIM1KQ8IY84 436 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 GBP4Q96PP9 640 aa20.62■□□□□ 0.89
PHGDH-232ENST00000641947 ZBTB12Q9Y330 459 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-232ENST00000641947 ZBTB43O43298 467 aa20.61■□□□□ 0.89
PHGDH-232ENST00000641947 ADD1P35611 737 aaKnown RBP20.61■□□□□ 0.89
PHGDH-232ENST00000641947 METAP2P50579 478 aaKnown RBP eCLIP20.61■□□□□ 0.891e-6■■□□□ 12.1
PHGDH-232ENST00000641947 SART3Q15020 963 aaKnown RBP20.61■□□□□ 0.89
PHGDH-232ENST00000641947 C16orf86Q6ZW13 317 aa20.61■□□□□ 0.89
PHGDH-232ENST00000641947 ZFPM1Q8IX07 1006 aa20.61■□□□□ 0.89
PHGDH-232ENST00000641947 CCDC69A6NI79 296 aa20.6■□□□□ 0.89
PHGDH-232ENST00000641947 RASA1P20936 1047 aa20.6■□□□□ 0.89
PHGDH-232ENST00000641947 RBM5P52756 815 aaKnown RBP eCLIP20.6■□□□□ 0.89
PHGDH-232ENST00000641947 AMOTL1Q8IY63 956 aa20.6■□□□□ 0.89
PHGDH-232ENST00000641947 OSBPL5Q9H0X9 879 aaPredicted RBP20.6■□□□□ 0.89
PHGDH-232ENST00000641947 SPON1Q9HCB6 807 aa20.6■□□□□ 0.89
PHGDH-232ENST00000641947 SLC12A7Q9Y666 1083 aa20.6■□□□□ 0.89
PHGDH-232ENST00000641947 DICER1Q9UPY3 1922 aaKnown RBP20.6■□□□□ 0.89
PHGDH-232ENST00000641947 GREB1LQ9C091 1923 aaPredicted RBP20.6■□□□□ 0.89
PHGDH-232ENST00000641947 ERICH2A1L162 156 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 VPS37CA5D8V6 355 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-232ENST00000641947 F13A1P00488 732 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 CXCL9Q07325 125 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 CFAP100Q494V2 611 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 SBF1O95248 1867 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 MYO3BQ8WXR4 1341 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 GOLGA8AA7E2F4 631 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 CDK8P49336 464 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 TFAP4Q01664 338 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 NTRK3Q16288 839 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 FOXD4L6Q3SYB3 417 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-232ENST00000641947 RCSD1Q6JBY9 416 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 FOXD4L3Q6VB84 417 aaPredicted RBP20.59■□□□□ 0.89
PHGDH-232ENST00000641947 ZNF654Q8IZM8 581 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 IL17RBQ9NRM6 502 aa20.59■□□□□ 0.89
PHGDH-232ENST00000641947 FAM198AQ9UFP1 575 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms